RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 REPS2Q8NFH8 660 aa14.01□□□□□ -0.17
SDCBP-211ENST00000523441 HERVK_113Q902F9 699 aa14.01□□□□□ -0.17
SDCBP-211ENST00000523441 KIFC2Q96AC6 838 aa14.01□□□□□ -0.17
SDCBP-211ENST00000523441 SCLYQ96I15 445 aa14.01□□□□□ -0.17
SDCBP-211ENST00000523441 SLF1Q9BQI6 1058 aa14.01□□□□□ -0.17
SDCBP-211ENST00000523441 TRPV6Q9H1D0 765 aa14.01□□□□□ -0.17
SDCBP-211ENST00000523441 ADAMTS5Q9UNA0 930 aa14.01□□□□□ -0.17
SDCBP-211ENST00000523441 HCN4Q9Y3Q4 1203 aa14.01□□□□□ -0.17
SDCBP-211ENST00000523441 SLC4A7Q9Y6M7 1214 aa14.01□□□□□ -0.17
SDCBP-211ENST00000523441 DDX49Q9Y6V7 483 aaKnown RBP14.01□□□□□ -0.17
SDCBP-211ENST00000523441 LRRC37A2A6NM11 1700 aa14.01□□□□□ -0.17
SDCBP-211ENST00000523441 SCN5AQ14524 2016 aa14□□□□□ -0.17
SDCBP-211ENST00000523441 CHD7Q9P2D1 2997 aa14□□□□□ -0.17
SDCBP-211ENST00000523441 SYNGAP1Q96PV0 1343 aa14□□□□□ -0.17
SDCBP-211ENST00000523441 XIRP2A4UGR9 3374 aa14□□□□□ -0.17
SDCBP-211ENST00000523441 C11orf97A0A1B0GVM6 126 aaPredicted RBP14□□□□□ -0.17
SDCBP-211ENST00000523441 ZKSCAN2Q63HK3 967 aa14□□□□□ -0.17
SDCBP-211ENST00000523441 FTSJ3Q8IY81 847 aaKnown RBP14□□□□□ -0.17
SDCBP-211ENST00000523441 LRFN3Q9BTN0 628 aa14□□□□□ -0.17
SDCBP-211ENST00000523441 TEX13BQ9BXU2 312 aa14□□□□□ -0.17
SDCBP-211ENST00000523441 NOP58Q9Y2X3 529 aaKnown RBP14□□□□□ -0.17
SDCBP-211ENST00000523441 TCRBV5S4A2TA0A5A2 114 aa13.99□□□□□ -0.17
SDCBP-211ENST00000523441 COPB2P35606 906 aa13.99□□□□□ -0.17
SDCBP-211ENST00000523441 GJA9P57773 515 aa13.99□□□□□ -0.17
SDCBP-211ENST00000523441 PSMC6P62333 389 aa13.99□□□□□ -0.17
SDCBP-211ENST00000523441 ARMCX2Q7L311 632 aa13.99□□□□□ -0.17
SDCBP-211ENST00000523441 DEFB128Q7Z7B8 93 aa13.99□□□□□ -0.17
SDCBP-211ENST00000523441 CCDC144CPQ8IYA2 1237 aa13.99□□□□□ -0.17
SDCBP-211ENST00000523441 CCDC17Q96LX7 622 aa13.99□□□□□ -0.17
SDCBP-211ENST00000523441 KANSL2Q9H9L4 492 aa13.99□□□□□ -0.17
SDCBP-211ENST00000523441 MYH7P12883 1935 aa13.99□□□□□ -0.17
SDCBP-211ENST00000523441 PRRC2BQ5JSZ5 2229 aaKnown RBP13.99□□□□□ -0.17
SDCBP-211ENST00000523441 ZBED4O75132 1171 aa13.98□□□□□ -0.17
SDCBP-211ENST00000523441 CST5P28325 142 aaPredicted RBP13.98□□□□□ -0.17
SDCBP-211ENST00000523441 CNTN2Q02246 1040 aa13.98□□□□□ -0.17
SDCBP-211ENST00000523441 TNFAIP2Q03169 654 aa13.98□□□□□ -0.17
SDCBP-211ENST00000523441 AAK1Q2M2I8 961 aa13.98□□□□□ -0.17
SDCBP-211ENST00000523441 C12orf60Q5U649 245 aa13.98□□□□□ -0.17
SDCBP-211ENST00000523441 EEPD1Q7L9B9 569 aa13.98□□□□□ -0.17
SDCBP-211ENST00000523441 PPP1R13LQ8WUF5 828 aa13.98□□□□□ -0.17
SDCBP-211ENST00000523441 DDRGK1Q96HY6 314 aa13.98□□□□□ -0.17
SDCBP-211ENST00000523441 ABHD16BQ9H3Z7 469 aa13.98□□□□□ -0.17
SDCBP-211ENST00000523441 SLC4A4Q9Y6R1 1079 aa13.98□□□□□ -0.17
SDCBP-211ENST00000523441 GTPBP6O43824 516 aaPredicted RBP13.97□□□□□ -0.17
SDCBP-211ENST00000523441 CD4P01730 458 aa13.97□□□□□ -0.17
SDCBP-211ENST00000523441 CA3P07451 260 aa13.97□□□□□ -0.17
SDCBP-211ENST00000523441 ATP2A2P16615 1042 aaKnown RBP13.97□□□□□ -0.17
SDCBP-211ENST00000523441 ITGA7Q13683 1181 aa13.97□□□□□ -0.17
SDCBP-211ENST00000523441 MAMDC4Q6UXC1 1216 aa13.97□□□□□ -0.17
SDCBP-211ENST00000523441 C16orf86Q6ZW13 317 aa13.97□□□□□ -0.17
SDCBP-211ENST00000523441 MSL3Q8N5Y2 521 aaKnown RBP13.97□□□□□ -0.17
SDCBP-211ENST00000523441 ARNTL2Q8WYA1 636 aa13.97□□□□□ -0.17
SDCBP-211ENST00000523441 AP5M1Q9H0R1 490 aa13.97□□□□□ -0.17
SDCBP-211ENST00000523441 UPF3AQ9H1J1 476 aaKnown RBP13.97□□□□□ -0.17
SDCBP-211ENST00000523441 WNT8AQ9H1J5 351 aa13.97□□□□□ -0.17
SDCBP-211ENST00000523441 BOLA2Q9H3K6 86 aa13.97□□□□□ -0.17
SDCBP-211ENST00000523441 DNAJC25-GNG10A0A024R161 153 aa13.96□□□□□ -0.17
SDCBP-211ENST00000523441 F5H6K3 240 aa13.96□□□□□ -0.17
SDCBP-211ENST00000523441 CTAGE5O15320 804 aa13.96□□□□□ -0.17
SDCBP-211ENST00000523441 DYNC1LI2O43237 492 aaPredicted RBP13.96□□□□□ -0.17
SDCBP-211ENST00000523441 B4GALT4O60513 344 aa13.96□□□□□ -0.17
SDCBP-211ENST00000523441 NDUFB10O96000 172 aa13.96□□□□□ -0.17
SDCBP-211ENST00000523441 IFIT2P09913 472 aaKnown RBP13.96□□□□□ -0.17
SDCBP-211ENST00000523441 KLRC3Q07444 240 aa13.96□□□□□ -0.17
SDCBP-211ENST00000523441 TTLL4Q14679 1199 aa13.96□□□□□ -0.17
SDCBP-211ENST00000523441 TMEM31Q5JXX7 168 aa13.96□□□□□ -0.17
SDCBP-211ENST00000523441 TLK2Q86UE8 772 aa13.96□□□□□ -0.17
SDCBP-211ENST00000523441 ERC1Q8IUD2 1116 aa13.96□□□□□ -0.17
SDCBP-211ENST00000523441 FGD4Q96M96 766 aa13.96□□□□□ -0.17
SDCBP-211ENST00000523441 NOC4LQ9BVI4 516 aaKnown RBP13.96□□□□□ -0.17
SDCBP-211ENST00000523441 ATP8A2Q9NTI2 1148 aa13.96□□□□□ -0.17
SDCBP-211ENST00000523441 CLIP2Q9UDT6 1046 aa13.96□□□□□ -0.17
SDCBP-211ENST00000523441 TRANK1O15050 2925 aa13.95□□□□□ -0.18
SDCBP-211ENST00000523441 ASTN1O14525 1302 aa13.95□□□□□ -0.18
SDCBP-211ENST00000523441 EPOPA6NHQ4 379 aa13.95□□□□□ -0.18
SDCBP-211ENST00000523441 MINDY4BA8MYZ0 360 aa13.95□□□□□ -0.18
SDCBP-211ENST00000523441 CYP2C9P11712 490 aa13.95□□□□□ -0.18
SDCBP-211ENST00000523441 RLBP1P12271 317 aa13.95□□□□□ -0.18
SDCBP-211ENST00000523441 FSCN1Q16658 493 aaKnown RBP13.95□□□□□ -0.18
SDCBP-211ENST00000523441 TMEM67Q5HYA8 995 aa13.95□□□□□ -0.18
SDCBP-211ENST00000523441 TMEM63BQ5T3F8 832 aa13.95□□□□□ -0.18
SDCBP-211ENST00000523441 CEP85Q6P2H3 762 aa13.95□□□□□ -0.18
SDCBP-211ENST00000523441 CTR9Q6PD62 1173 aa13.95□□□□□ -0.18
SDCBP-211ENST00000523441 RPUSD2Q8IZ73 545 aaKnown RBP13.95□□□□□ -0.18
SDCBP-211ENST00000523441 LRRC47Q8N1G4 583 aaKnown RBP13.95□□□□□ -0.18
SDCBP-211ENST00000523441 PRPF38AQ8NAV1 312 aaKnown RBP13.95□□□□□ -0.18
SDCBP-211ENST00000523441 RHPN1Q8TCX5 695 aa13.95□□□□□ -0.18
SDCBP-211ENST00000523441 KHSRPQ92945 711 aaKnown RBP eCLIP13.95□□□□□ -0.18
SDCBP-211ENST00000523441 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.95□□□□□ -0.18
SDCBP-211ENST00000523441 MKNK2Q9HBH9 465 aa13.95□□□□□ -0.18
SDCBP-211ENST00000523441 PAG1Q9NWQ8 432 aa13.95□□□□□ -0.18
SDCBP-211ENST00000523441 PCDHA11Q9Y5I1 949 aa13.95□□□□□ -0.18
SDCBP-211ENST00000523441 MTCH2Q9Y6C9 303 aa13.95□□□□□ -0.18
SDCBP-211ENST00000523441 COL4A4P53420 1690 aaPredicted RBP13.95□□□□□ -0.18
SDCBP-211ENST00000523441 GRIN2DO15399 1336 aa13.94□□□□□ -0.18
SDCBP-211ENST00000523441 RBAK-RBAKDNI3L0D1 243 aa13.94□□□□□ -0.18
SDCBP-211ENST00000523441 ERC2O15083 957 aa13.94□□□□□ -0.18
SDCBP-211ENST00000523441 ADD2P35612 726 aa13.94□□□□□ -0.18
SDCBP-211ENST00000523441 CHMP4BP1P59074 171 aa13.94□□□□□ -0.18
SDCBP-211ENST00000523441 SNAP25P60880 206 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms