RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 TKFCQ3LXA3 575 aa19.11■□□□□ 0.65
CLN8-206ENST00000523237 GJC2Q5T442 439 aaPredicted RBP19.11■□□□□ 0.65
CLN8-206ENST00000523237 RASGRP2Q7LDG7 609 aa19.11■□□□□ 0.65
CLN8-206ENST00000523237 ZNF467Q7Z7K2 595 aaPredicted RBP19.11■□□□□ 0.65
CLN8-206ENST00000523237 AGBL1Q96MI9 1066 aa19.11■□□□□ 0.65
CLN8-206ENST00000523237 MCM3APO60318 1980 aa19.1■□□□□ 0.65
CLN8-206ENST00000523237 MYCNP04198 464 aaPredicted RBP19.1■□□□□ 0.65
CLN8-206ENST00000523237 RARBP10826 455 aa19.1■□□□□ 0.65
CLN8-206ENST00000523237 CCDC174Q6PII3 467 aa19.1■□□□□ 0.65
CLN8-206ENST00000523237 MAMDC4Q6UXC1 1216 aa19.1■□□□□ 0.65
CLN8-206ENST00000523237 PRO3102Q9H379 93 aa19.1■□□□□ 0.65
CLN8-206ENST00000523237 RNF146Q9NTX7 359 aa19.1■□□□□ 0.65
CLN8-206ENST00000523237 ZMYND8Q9ULU4 1186 aaPredicted RBP19.1■□□□□ 0.65
CLN8-206ENST00000523237 RAD50Q92878 1312 aa19.09■□□□□ 0.65
CLN8-206ENST00000523237 ZNF865P0CJ78 1059 aaPredicted RBP19.09■□□□□ 0.65
CLN8-206ENST00000523237 ALAS1P13196 640 aa19.09■□□□□ 0.65
CLN8-206ENST00000523237 AKR1A1P14550 325 aa19.09■□□□□ 0.65
CLN8-206ENST00000523237 TAL1P17542 331 aaPredicted RBP19.09■□□□□ 0.65
CLN8-206ENST00000523237 FXR1P51114 621 aaKnown RBP eCLIP19.09■□□□□ 0.65
CLN8-206ENST00000523237 BTNL9Q6UXG8 535 aa19.09■□□□□ 0.65
CLN8-206ENST00000523237 IQCA1Q86XH1 822 aa19.09■□□□□ 0.65
CLN8-206ENST00000523237 TRERF1Q96PN7 1200 aa19.09■□□□□ 0.65
CLN8-206ENST00000523237 XPNPEP3Q9NQH7 507 aa19.09■□□□□ 0.65
CLN8-206ENST00000523237 FRMPD2Q68DX3 1309 aaPredicted RBP19.08■□□□□ 0.65
CLN8-206ENST00000523237 PDHBP11177 359 aa19.08■□□□□ 0.64
CLN8-206ENST00000523237 SYN1P17600 705 aa19.08■□□□□ 0.64
CLN8-206ENST00000523237 SNAP25P60880 206 aa19.08■□□□□ 0.64
CLN8-206ENST00000523237 LRRC41Q15345 812 aa19.08■□□□□ 0.64
CLN8-206ENST00000523237 CCDC178Q5BJE1 867 aa19.08■□□□□ 0.64
CLN8-206ENST00000523237 TTBK2Q6IQ55 1244 aa19.08■□□□□ 0.64
CLN8-206ENST00000523237 DGKHQ86XP1 1220 aa19.08■□□□□ 0.64
CLN8-206ENST00000523237 RUFY2Q8WXA3 655 aa19.08■□□□□ 0.64
CLN8-206ENST00000523237 GPCPD1Q9NPB8 672 aa19.08■□□□□ 0.64
CLN8-206ENST00000523237 A1CFQ9NQ94 594 aaKnown RBP19.08■□□□□ 0.64
CLN8-206ENST00000523237 A0A1W2PPC1 479 aa19.07■□□□□ 0.64
CLN8-206ENST00000523237 POTEB2H3BUK9 544 aa19.07■□□□□ 0.64
CLN8-206ENST00000523237 KDM4AO75164 1064 aa19.07■□□□□ 0.64
CLN8-206ENST00000523237 SNAI1O95863 264 aaPredicted RBP19.07■□□□□ 0.64
CLN8-206ENST00000523237 ICAM1P05362 532 aa19.07■□□□□ 0.64
CLN8-206ENST00000523237 SLC16A2P36021 539 aa19.07■□□□□ 0.64
CLN8-206ENST00000523237 ATN1P54259 1190 aaPredicted RBP19.07■□□□□ 0.64
CLN8-206ENST00000523237 SYDE2Q5VT97 1194 aa19.07■□□□□ 0.64
CLN8-206ENST00000523237 ZKSCAN3Q9BRR0 538 aa19.07■□□□□ 0.64
CLN8-206ENST00000523237 IL25Q9H293 177 aa19.07■□□□□ 0.64
CLN8-206ENST00000523237 RANBP17Q9H2T7 1088 aaKnown RBP19.07■□□□□ 0.64
CLN8-206ENST00000523237 CNNM2Q9H8M5 875 aa19.07■□□□□ 0.64
CLN8-206ENST00000523237 ZHX1Q9UKY1 873 aaPredicted RBP19.07■□□□□ 0.64
CLN8-206ENST00000523237 FAM184BQ9ULE4 1060 aa19.07■□□□□ 0.64
CLN8-206ENST00000523237 CCPG1Q9ULG6 757 aa19.07■□□□□ 0.64
CLN8-206ENST00000523237 TRIOBPQ9H2D6 2365 aa19.07■□□□□ 0.64
CLN8-206ENST00000523237 DNAH12Q6ZR08 3092 aa19.06■□□□□ 0.64
CLN8-206ENST00000523237 B4E1Z4 1266 aa19.06■□□□□ 0.64
CLN8-206ENST00000523237 CNTN2Q02246 1040 aa19.06■□□□□ 0.64
CLN8-206ENST00000523237 ZNF543Q08ER8 600 aa19.06■□□□□ 0.64
CLN8-206ENST00000523237 RNF180Q86T96 592 aa19.06■□□□□ 0.64
CLN8-206ENST00000523237 FGD4Q96M96 766 aa19.06■□□□□ 0.64
CLN8-206ENST00000523237 KRT23Q9C075 422 aa19.06■□□□□ 0.64
CLN8-206ENST00000523237 ABHD16BQ9H3Z7 469 aa19.06■□□□□ 0.64
CLN8-206ENST00000523237 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.06■□□□□ 0.64
CLN8-206ENST00000523237 SNHG28P0DPA3 235 aa19.05■□□□□ 0.64
CLN8-206ENST00000523237 CHMLP26374 656 aa19.05■□□□□ 0.64
CLN8-206ENST00000523237 BMP8BP34820 402 aa19.05■□□□□ 0.64
CLN8-206ENST00000523237 ACVR2BQ13705 512 aa19.05■□□□□ 0.64
CLN8-206ENST00000523237 MUM1L1Q5H9M0 696 aa19.05■□□□□ 0.64
CLN8-206ENST00000523237 SLC39A5Q6ZMH5 540 aa19.05■□□□□ 0.64
CLN8-206ENST00000523237 ARMCX2Q7L311 632 aa19.05■□□□□ 0.64
CLN8-206ENST00000523237 FAM133AQ8N9E0 248 aa19.05■□□□□ 0.64
CLN8-206ENST00000523237 GDF15Q99988 308 aa19.05■□□□□ 0.64
CLN8-206ENST00000523237 PNMA2Q9UL42 364 aa19.05■□□□□ 0.64
CLN8-206ENST00000523237 PGK1P00558 417 aa19.04■□□□□ 0.64
CLN8-206ENST00000523237 ADCYAP1R1P41586 468 aa19.04■□□□□ 0.64
CLN8-206ENST00000523237 RTP1P59025 263 aa19.04■□□□□ 0.64
CLN8-206ENST00000523237 GPATCH4Q5T3I0 446 aaKnown RBP19.04■□□□□ 0.64
CLN8-206ENST00000523237 CCDC144CPQ8IYA2 1237 aa19.04■□□□□ 0.64
CLN8-206ENST00000523237 PNMA1Q8ND90 353 aa19.04■□□□□ 0.64
CLN8-206ENST00000523237 ZSCAN10Q96SZ4 725 aaPredicted RBP19.04■□□□□ 0.64
CLN8-206ENST00000523237 KAT14Q9H8E8 782 aa19.04■□□□□ 0.64
CLN8-206ENST00000523237 CYP39A1Q9NYL5 469 aa19.04■□□□□ 0.64
CLN8-206ENST00000523237 ZSWIM5Q9P217 1185 aa19.04■□□□□ 0.64
CLN8-206ENST00000523237 ASB14A6NK59 587 aa19.03■□□□□ 0.64
CLN8-206ENST00000523237 MAGEA10P43363 369 aaPredicted RBP19.03■□□□□ 0.64
CLN8-206ENST00000523237 NSMFQ6X4W1 530 aa19.03■□□□□ 0.64
CLN8-206ENST00000523237 ANKS1AQ92625 1134 aa19.03■□□□□ 0.64
CLN8-206ENST00000523237 FERMT2Q96AC1 680 aa19.03■□□□□ 0.64
CLN8-206ENST00000523237 LENG1Q96BZ8 264 aaPredicted RBP19.03■□□□□ 0.64
CLN8-206ENST00000523237 UBAC1Q9BSL1 405 aa19.03■□□□□ 0.64
CLN8-206ENST00000523237 PHF24Q9UPV7 400 aa19.03■□□□□ 0.64
CLN8-206ENST00000523237 LCTP09848 1927 aa19.03■□□□□ 0.64
CLN8-206ENST00000523237 TNKSO95271 1327 aa19.02■□□□□ 0.64
CLN8-206ENST00000523237 SOWAHBA6NEL2 793 aa19.02■□□□□ 0.64
CLN8-206ENST00000523237 ADAMTS4O75173 837 aa19.02■□□□□ 0.64
CLN8-206ENST00000523237 DUSP11O75319 330 aaKnown RBP19.02■□□□□ 0.64
CLN8-206ENST00000523237 ENAHQ8N8S7 591 aaPredicted RBP19.02■□□□□ 0.64
CLN8-206ENST00000523237 PRKAG2Q9UGJ0 569 aa19.02■□□□□ 0.64
CLN8-206ENST00000523237 ATP11BQ9Y2G3 1177 aa19.02■□□□□ 0.64
CLN8-206ENST00000523237 LRRC37A2A6NM11 1700 aa19.02■□□□□ 0.63
CLN8-206ENST00000523237 SYNRGQ9UMZ2 1314 aa19.01■□□□□ 0.63
CLN8-206ENST00000523237 TRDNQ13061 729 aa19.01■□□□□ 0.63
CLN8-206ENST00000523237 SNX17Q15036 470 aa19.01■□□□□ 0.63
CLN8-206ENST00000523237 CCDC144BQ3MJ40 725 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms