RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 GMCL1P1Q8NEA9 526 aa18.33■□□□□ 0.52
MRPS28-209ENST00000522987 VTI1AQ96AJ9 217 aa18.33■□□□□ 0.52
MRPS28-209ENST00000522987 STX8Q9UNK0 236 aa18.33■□□□□ 0.52
MRPS28-209ENST00000522987 PLIN4Q96Q06 1357 aa18.32■□□□□ 0.52
MRPS28-209ENST00000522987 TSPY2A6NKD2 308 aa18.32■□□□□ 0.52
MRPS28-209ENST00000522987 SLC3A2P08195 630 aaKnown RBP18.32■□□□□ 0.52
MRPS28-209ENST00000522987 SLC1A4P43007 532 aa18.32■□□□□ 0.52
MRPS28-209ENST00000522987 CCDC144BQ3MJ40 725 aa18.32■□□□□ 0.52
MRPS28-209ENST00000522987 ANKRD45Q5TZF3 282 aa18.32■□□□□ 0.52
MRPS28-209ENST00000522987 VPS53Q5VIR6 699 aa18.32■□□□□ 0.52
MRPS28-209ENST00000522987 C1orf53Q5VUE5 145 aa18.32■□□□□ 0.52
MRPS28-209ENST00000522987 CCDC144CPQ8IYA2 1237 aa18.32■□□□□ 0.52
MRPS28-209ENST00000522987 RNPC3Q96LT9 517 aaKnown RBP18.32■□□□□ 0.52
MRPS28-209ENST00000522987 CRBNQ96SW2 442 aa18.32■□□□□ 0.52
MRPS28-209ENST00000522987 RNF146Q9NTX7 359 aa18.32■□□□□ 0.52
MRPS28-209ENST00000522987 GBF1Q92538 1859 aa18.32■□□□□ 0.52
MRPS28-209ENST00000522987 MYO9BQ13459 2157 aa18.32■□□□□ 0.52
MRPS28-209ENST00000522987 ATP2A1O14983 1001 aa18.31■□□□□ 0.52
MRPS28-209ENST00000522987 ALAS1P13196 640 aa18.31■□□□□ 0.52
MRPS28-209ENST00000522987 STAT2P52630 851 aa18.31■□□□□ 0.52
MRPS28-209ENST00000522987 BEX3Q00994 111 aa18.31■□□□□ 0.52
MRPS28-209ENST00000522987 FAAP100Q0VG06 881 aa18.31■□□□□ 0.52
MRPS28-209ENST00000522987 FAM109BQ6ICB4 259 aaPredicted RBP18.31■□□□□ 0.52
MRPS28-209ENST00000522987 MAMDC4Q6UXC1 1216 aa18.31■□□□□ 0.52
MRPS28-209ENST00000522987 NOL8Q76FK4 1167 aaKnown RBP18.31■□□□□ 0.52
MRPS28-209ENST00000522987 KLHDC9Q8NEP7 349 aa18.31■□□□□ 0.52
MRPS28-209ENST00000522987 CHST13Q8NET6 341 aa18.31■□□□□ 0.52
MRPS28-209ENST00000522987 MYLIPQ8WY64 445 aa18.31■□□□□ 0.52
MRPS28-209ENST00000522987 CDX2Q99626 313 aaPredicted RBP18.31■□□□□ 0.52
MRPS28-209ENST00000522987 ZNF536O15090 1300 aa18.3■□□□□ 0.52
MRPS28-209ENST00000522987 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.3■□□□□ 0.52
MRPS28-209ENST00000522987 KIAA0355O15063 1070 aa18.3■□□□□ 0.52
MRPS28-209ENST00000522987 RANBP6O60518 1105 aaKnown RBP18.3■□□□□ 0.52
MRPS28-209ENST00000522987 DUSP11O75319 330 aaKnown RBP18.3■□□□□ 0.52
MRPS28-209ENST00000522987 ASGR1P07306 291 aa18.3■□□□□ 0.52
MRPS28-209ENST00000522987 FPGSQ05932 587 aa18.3■□□□□ 0.52
MRPS28-209ENST00000522987 MSL3Q8N5Y2 521 aaKnown RBP18.3■□□□□ 0.52
MRPS28-209ENST00000522987 TSEN34Q9BSV6 310 aaKnown RBP18.3■□□□□ 0.52
MRPS28-209ENST00000522987 TTYH1Q9H313 450 aaPredicted RBP18.3■□□□□ 0.52
MRPS28-209ENST00000522987 SEMA6BQ9H3T3 888 aa18.3■□□□□ 0.52
MRPS28-209ENST00000522987 ACAD9Q9H845 621 aa18.3■□□□□ 0.52
MRPS28-209ENST00000522987 IL17RBQ9NRM6 502 aa18.3■□□□□ 0.52
MRPS28-209ENST00000522987 TOMM22Q9NS69 142 aa18.3■□□□□ 0.52
MRPS28-209ENST00000522987 ZBTB47Q9UFB7 747 aaPredicted RBP18.3■□□□□ 0.52
MRPS28-209ENST00000522987 FBXO40Q9UH90 709 aa18.3■□□□□ 0.52
MRPS28-209ENST00000522987 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.3■□□□□ 0.52
MRPS28-209ENST00000522987 SOWAHBA6NEL2 793 aa18.29■□□□□ 0.52
MRPS28-209ENST00000522987 DCDC2CA8MYV0 355 aa18.29■□□□□ 0.52
MRPS28-209ENST00000522987 RRP1P56182 461 aaKnown RBP18.29■□□□□ 0.52
MRPS28-209ENST00000522987 CCDC96Q2M329 555 aa18.29■□□□□ 0.52
MRPS28-209ENST00000522987 MUM1L1Q5H9M0 696 aa18.29■□□□□ 0.52
MRPS28-209ENST00000522987 RRP12Q5JTH9 1297 aaKnown RBP18.29■□□□□ 0.52
MRPS28-209ENST00000522987 GNASQ5JWF2 1037 aa18.29■□□□□ 0.52
MRPS28-209ENST00000522987 CCSAPQ6IQ19 270 aaPredicted RBP18.29■□□□□ 0.52
MRPS28-209ENST00000522987 EEPD1Q7L9B9 569 aa18.29■□□□□ 0.52
MRPS28-209ENST00000522987 ZNF467Q7Z7K2 595 aaPredicted RBP18.29■□□□□ 0.52
MRPS28-209ENST00000522987 NUP133Q8WUM0 1156 aa18.29■□□□□ 0.52
MRPS28-209ENST00000522987 STAG1Q8WVM7 1258 aa18.29■□□□□ 0.52
MRPS28-209ENST00000522987 TRERF1Q96PN7 1200 aa18.29■□□□□ 0.52
MRPS28-209ENST00000522987 PURBQ96QR8 312 aaKnown RBP18.29■□□□□ 0.52
MRPS28-209ENST00000522987 ABHD16BQ9H3Z7 469 aa18.29■□□□□ 0.52
MRPS28-209ENST00000522987 A1CFQ9NQ94 594 aaKnown RBP18.29■□□□□ 0.52
MRPS28-209ENST00000522987 SALL3Q9BXA9 1300 aa18.28■□□□□ 0.52
MRPS28-209ENST00000522987 A0A0C4DFX4 3053 aa18.28■□□□□ 0.52
MRPS28-209ENST00000522987 OAZ1P54368 228 aa18.28■□□□□ 0.52
MRPS28-209ENST00000522987 FAM160B2Q86V87 743 aa18.28■□□□□ 0.52
MRPS28-209ENST00000522987 CHURC1Q8WUH1 139 aa18.28■□□□□ 0.52
MRPS28-209ENST00000522987 GMCL1Q96IK5 515 aa18.28■□□□□ 0.52
MRPS28-209ENST00000522987 FAM227BQ96M60 508 aa18.28■□□□□ 0.52
MRPS28-209ENST00000522987 GLT1D1Q96MS3 346 aa18.28■□□□□ 0.52
MRPS28-209ENST00000522987 PPP1R12CQ9BZL4 782 aa18.28■□□□□ 0.52
MRPS28-209ENST00000522987 PRR12Q9ULL5 1215 aa18.28■□□□□ 0.52
MRPS28-209ENST00000522987 MOXD2PA6NHM9 499 aa18.27■□□□□ 0.52
MRPS28-209ENST00000522987 SLC16A2P36021 539 aa18.27■□□□□ 0.52
MRPS28-209ENST00000522987 TMEM63BQ5T3F8 832 aa18.27■□□□□ 0.52
MRPS28-209ENST00000522987 TTBK2Q6IQ55 1244 aa18.27■□□□□ 0.52
MRPS28-209ENST00000522987 NSMFQ6X4W1 530 aa18.27■□□□□ 0.52
MRPS28-209ENST00000522987 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.27■□□□□ 0.52
MRPS28-209ENST00000522987 FAM133AQ8N9E0 248 aa18.27■□□□□ 0.52
MRPS28-209ENST00000522987 KATNBL1Q9H079 304 aa18.27■□□□□ 0.52
MRPS28-209ENST00000522987 SPC25Q9HBM1 224 aa18.27■□□□□ 0.52
MRPS28-209ENST00000522987 PDGFCQ9NRA1 345 aa18.27■□□□□ 0.52
MRPS28-209ENST00000522987 CUL9Q8IWT3 2517 aa18.27■□□□□ 0.52
MRPS28-209ENST00000522987 MYH6P13533 1939 aa18.27■□□□□ 0.51
MRPS28-209ENST00000522987 ASTN1O14525 1302 aa18.26■□□□□ 0.51
MRPS28-209ENST00000522987 FRMPD2Q68DX3 1309 aaPredicted RBP18.26■□□□□ 0.51
MRPS28-209ENST00000522987 A0A0D9SFI3 127 aa18.26■□□□□ 0.51
MRPS28-209ENST00000522987 GJA9P57773 515 aa18.26■□□□□ 0.51
MRPS28-209ENST00000522987 HAND2P61296 217 aa18.26■□□□□ 0.51
MRPS28-209ENST00000522987 SMAD3P84022 425 aaKnown RBP18.26■□□□□ 0.51
MRPS28-209ENST00000522987 TNFAIP2Q03169 654 aa18.26■□□□□ 0.51
MRPS28-209ENST00000522987 RCSD1Q6JBY9 416 aa18.26■□□□□ 0.51
MRPS28-209ENST00000522987 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.26■□□□□ 0.51
MRPS28-209ENST00000522987 ANKRD33Q7Z3H0 272 aa18.26■□□□□ 0.51
MRPS28-209ENST00000522987 FBXO16Q8IX29 292 aaPredicted RBP18.26■□□□□ 0.51
MRPS28-209ENST00000522987 UPF3AQ9H1J1 476 aaKnown RBP18.26■□□□□ 0.51
MRPS28-209ENST00000522987 GPCPD1Q9NPB8 672 aa18.26■□□□□ 0.51
MRPS28-209ENST00000522987 CCPG1Q9ULG6 757 aa18.26■□□□□ 0.51
MRPS28-209ENST00000522987 SYNPO2Q9UMS6 1093 aa18.26■□□□□ 0.51
MRPS28-209ENST00000522987 CTAGE5O15320 804 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms