RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 ERC2O15083 957 aa11.19□□□□□ -0.62
SDC2-207ENST00000522911 SMARCA5O60264 1052 aaPredicted RBP11.19□□□□□ -0.62
SDC2-207ENST00000522911 TIMP1P01033 207 aa11.19□□□□□ -0.62
SDC2-207ENST00000522911 BMP3P12645 472 aa11.19□□□□□ -0.62
SDC2-207ENST00000522911 TDO2P48775 406 aa11.19□□□□□ -0.62
SDC2-207ENST00000522911 KCNA10Q16322 511 aa11.19□□□□□ -0.62
SDC2-207ENST00000522911 TKFCQ3LXA3 575 aa11.19□□□□□ -0.62
SDC2-207ENST00000522911 ZMYM1Q5SVZ6 1142 aa11.19□□□□□ -0.62
SDC2-207ENST00000522911 C20orf194Q5TEA3 1177 aa11.19□□□□□ -0.62
SDC2-207ENST00000522911 RASIP1Q5U651 963 aa11.19□□□□□ -0.62
SDC2-207ENST00000522911 MFSD5Q6N075 450 aa11.19□□□□□ -0.62
SDC2-207ENST00000522911 FAM160B2Q86V87 743 aa11.19□□□□□ -0.62
SDC2-207ENST00000522911 SLC43A3Q8NBI5 491 aa11.19□□□□□ -0.62
SDC2-207ENST00000522911 PI4K2BQ8TCG2 481 aa11.19□□□□□ -0.62
SDC2-207ENST00000522911 CHURC1Q8WUH1 139 aa11.19□□□□□ -0.62
SDC2-207ENST00000522911 GLT1D1Q96MS3 346 aa11.19□□□□□ -0.62
SDC2-207ENST00000522911 COL25A1Q9BXS0 654 aaPredicted RBP11.19□□□□□ -0.62
SDC2-207ENST00000522911 SPC25Q9HBM1 224 aa11.19□□□□□ -0.62
SDC2-207ENST00000522911 TMEM39AQ9NV64 488 aa11.19□□□□□ -0.62
SDC2-207ENST00000522911 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.19□□□□□ -0.62
SDC2-207ENST00000522911 LOC102724159A0A0B4J2E5 919 aa11.18□□□□□ -0.62
SDC2-207ENST00000522911 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.18□□□□□ -0.62
SDC2-207ENST00000522911 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.18□□□□□ -0.62
SDC2-207ENST00000522911 CTAGE5O15320 804 aa11.18□□□□□ -0.62
SDC2-207ENST00000522911 PQBP1O60828 265 aaKnown RBP11.18□□□□□ -0.62
SDC2-207ENST00000522911 SLC3A2P08195 630 aaKnown RBP11.18□□□□□ -0.62
SDC2-207ENST00000522911 FGRP09769 529 aa11.18□□□□□ -0.62
SDC2-207ENST00000522911 STAT2P52630 851 aa11.18□□□□□ -0.62
SDC2-207ENST00000522911 EPHB4P54760 987 aa11.18□□□□□ -0.62
SDC2-207ENST00000522911 PWP2Q15269 919 aaKnown RBP11.18□□□□□ -0.62
SDC2-207ENST00000522911 CCDC144BQ3MJ40 725 aa11.18□□□□□ -0.62
SDC2-207ENST00000522911 CCDC174Q6PII3 467 aa11.18□□□□□ -0.62
SDC2-207ENST00000522911 SAMD1Q6SPF0 538 aaPredicted RBP11.18□□□□□ -0.62
SDC2-207ENST00000522911 ARMCX2Q7L311 632 aa11.18□□□□□ -0.62
SDC2-207ENST00000522911 ANKRD35Q8N283 1001 aa11.18□□□□□ -0.62
SDC2-207ENST00000522911 KIFC2Q96AC6 838 aa11.18□□□□□ -0.62
SDC2-207ENST00000522911 RNPC3Q96LT9 517 aaKnown RBP11.18□□□□□ -0.62
SDC2-207ENST00000522911 ANAPC4Q9UJX5 808 aa11.18□□□□□ -0.62
SDC2-207ENST00000522911 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.18□□□□□ -0.62
SDC2-207ENST00000522911 ZNF536O15090 1300 aa11.17□□□□□ -0.62
SDC2-207ENST00000522911 SALL3Q9BXA9 1300 aa11.17□□□□□ -0.62
SDC2-207ENST00000522911 A0A0U1RQG5 324 aaPredicted RBP11.17□□□□□ -0.62
SDC2-207ENST00000522911 ASB14A6NK59 587 aa11.17□□□□□ -0.62
SDC2-207ENST00000522911 M0R2C6 588 aa11.17□□□□□ -0.62
SDC2-207ENST00000522911 ARVCFO00192 962 aa11.17□□□□□ -0.62
SDC2-207ENST00000522911 ADCY6O43306 1168 aa11.17□□□□□ -0.62
SDC2-207ENST00000522911 CABYRO75952 493 aa11.17□□□□□ -0.62
SDC2-207ENST00000522911 CD4P01730 458 aa11.17□□□□□ -0.62
SDC2-207ENST00000522911 MYCNP04198 464 aaPredicted RBP11.17□□□□□ -0.62
SDC2-207ENST00000522911 ASGR1P07306 291 aa11.17□□□□□ -0.62
SDC2-207ENST00000522911 TSPY3P0CV98 308 aa11.17□□□□□ -0.62
SDC2-207ENST00000522911 TSPY8P0CW00 308 aa11.17□□□□□ -0.62
SDC2-207ENST00000522911 PPIGQ13427 754 aaKnown RBP eCLIP11.17□□□□□ -0.622e-7■■■□□ 15.2
SDC2-207ENST00000522911 SLFN13Q68D06 897 aa11.17□□□□□ -0.62
SDC2-207ENST00000522911 CCDC129Q6ZRS4 1044 aa11.17□□□□□ -0.62
SDC2-207ENST00000522911 CCDC144CPQ8IYA2 1237 aa11.17□□□□□ -0.62
SDC2-207ENST00000522911 MAFAQ8NHW3 353 aaPredicted RBP11.17□□□□□ -0.62
SDC2-207ENST00000522911 MORC4Q8TE76 937 aa11.17□□□□□ -0.62
SDC2-207ENST00000522911 STAG1Q8WVM7 1258 aa11.17□□□□□ -0.62
SDC2-207ENST00000522911 LENG1Q96BZ8 264 aaPredicted RBP11.17□□□□□ -0.62
SDC2-207ENST00000522911 ACAD9Q9H845 621 aa11.17□□□□□ -0.62
SDC2-207ENST00000522911 RAVER2Q9HCJ3 691 aaKnown RBP11.17□□□□□ -0.62
SDC2-207ENST00000522911 ZHX1Q9UKY1 873 aaPredicted RBP11.17□□□□□ -0.62
SDC2-207ENST00000522911 Q9Y3F1 56 aa11.17□□□□□ -0.62
SDC2-207ENST00000522911 CTDP1Q9Y5B0 961 aaPredicted RBP11.17□□□□□ -0.62
SDC2-207ENST00000522911 CHD7Q9P2D1 2997 aa11.16□□□□□ -0.62
SDC2-207ENST00000522911 MYH4Q9Y623 1939 aa11.16□□□□□ -0.62
SDC2-207ENST00000522911 MYADML2A6NDP7 307 aa11.16□□□□□ -0.62
SDC2-207ENST00000522911 TMEM232C9JQI7 657 aa11.16□□□□□ -0.62
SDC2-207ENST00000522911 RAD21O60216 631 aa11.16□□□□□ -0.62
SDC2-207ENST00000522911 PRDM1O75626 825 aa11.16□□□□□ -0.62
SDC2-207ENST00000522911 CENPBP07199 599 aaPredicted RBP11.16□□□□□ -0.62
SDC2-207ENST00000522911 C6orf222P0C671 652 aaPredicted RBP11.16□□□□□ -0.62
SDC2-207ENST00000522911 PPARAQ07869 468 aa11.16□□□□□ -0.62
SDC2-207ENST00000522911 ALX1Q15699 326 aa11.16□□□□□ -0.62
SDC2-207ENST00000522911 RCSD1Q6JBY9 416 aa11.16□□□□□ -0.62
SDC2-207ENST00000522911 FAM126BQ8IXS8 530 aa11.16□□□□□ -0.62
SDC2-207ENST00000522911 CPXCR1Q8N123 301 aa11.16□□□□□ -0.62
SDC2-207ENST00000522911 FAM161BQ96MY7 647 aa11.16□□□□□ -0.62
SDC2-207ENST00000522911 NAPBQ9H115 298 aa11.16□□□□□ -0.62
SDC2-207ENST00000522911 A1CFQ9NQ94 594 aaKnown RBP11.16□□□□□ -0.62
SDC2-207ENST00000522911 GNEQ9Y223 722 aaKnown RBP11.16□□□□□ -0.62
SDC2-207ENST00000522911 TTC28Q96AY4 2481 aa11.16□□□□□ -0.62
SDC2-207ENST00000522911 FOXP2O15409 715 aa11.15□□□□□ -0.62
SDC2-207ENST00000522911 ORC4O43929 436 aa11.15□□□□□ -0.62
SDC2-207ENST00000522911 APPP05067 770 aa11.15□□□□□ -0.62
SDC2-207ENST00000522911 DNAJB2P25686 324 aa11.15□□□□□ -0.62
SDC2-207ENST00000522911 SLC1A4P43007 532 aa11.15□□□□□ -0.62
SDC2-207ENST00000522911 TFAP4Q01664 338 aa11.15□□□□□ -0.62
SDC2-207ENST00000522911 GNASQ5JWF2 1037 aa11.15□□□□□ -0.62
SDC2-207ENST00000522911 TMEM240Q5SV17 173 aa11.15□□□□□ -0.62
SDC2-207ENST00000522911 PSRC1Q6PGN9 363 aaPredicted RBP11.15□□□□□ -0.62
SDC2-207ENST00000522911 BTNL9Q6UXG8 535 aa11.15□□□□□ -0.62
SDC2-207ENST00000522911 C16orf59Q7L2K0 433 aa11.15□□□□□ -0.62
SDC2-207ENST00000522911 LRRC47Q8N1G4 583 aaKnown RBP11.15□□□□□ -0.62
SDC2-207ENST00000522911 MAF1Q9H063 256 aa11.15□□□□□ -0.62
SDC2-207ENST00000522911 XIRP2A4UGR9 3374 aa11.15□□□□□ -0.62
SDC2-207ENST00000522911 ASTN1O14525 1302 aa11.14□□□□□ -0.63
SDC2-207ENST00000522911 ZMYM6O95789 1325 aa11.14□□□□□ -0.63
SDC2-207ENST00000522911 TLR3O15455 904 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms