RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 CAPN6Q9Y6Q1 641 aa6.29□□□□□ -1.4
SKP1-210ENST00000522855 CNTNAP4Q9C0A0 1308 aa6.28□□□□□ -1.4
SKP1-210ENST00000522855 TRAV20A0A0B4J274 112 aa6.28□□□□□ -1.4
SKP1-210ENST00000522855 CCDC163A0A0D9SF12 145 aa6.28□□□□□ -1.4
SKP1-210ENST00000522855 BIN1O00499 593 aa6.28□□□□□ -1.4
SKP1-210ENST00000522855 CLCN7P51798 805 aa6.28□□□□□ -1.4
SKP1-210ENST00000522855 ZNF445P59923 1031 aa6.28□□□□□ -1.4
SKP1-210ENST00000522855 GRB10Q13322 594 aa6.28□□□□□ -1.4
SKP1-210ENST00000522855 FIBCD1Q8N539 461 aa6.28□□□□□ -1.4
SKP1-210ENST00000522855 ZBTB38Q8NAP3 1195 aaPredicted RBP6.28□□□□□ -1.4
SKP1-210ENST00000522855 ADCY4Q8NFM4 1077 aa6.28□□□□□ -1.4
SKP1-210ENST00000522855 AARSD1Q9BTE6 412 aaKnown RBP6.28□□□□□ -1.4
SKP1-210ENST00000522855 SLKQ9H2G2 1235 aaPredicted RBP6.28□□□□□ -1.4
SKP1-210ENST00000522855 GPATCH2Q9NW75 528 aa6.28□□□□□ -1.4
SKP1-210ENST00000522855 GFOD1Q9NXC2 390 aa6.28□□□□□ -1.4
SKP1-210ENST00000522855 CGGBP1Q9UFW8 167 aaPredicted RBP6.28□□□□□ -1.4
SKP1-210ENST00000522855 AKT3Q9Y243 479 aa6.28□□□□□ -1.4
SKP1-210ENST00000522855 A0A1W2PQU0 124 aa6.27□□□□□ -1.41
SKP1-210ENST00000522855 PRR33A8MZF0 331 aa6.27□□□□□ -1.41
SKP1-210ENST00000522855 ADCY3O60266 1144 aa6.27□□□□□ -1.41
SKP1-210ENST00000522855 LRRN2O75325 713 aa6.27□□□□□ -1.41
SKP1-210ENST00000522855 ITGAVP06756 1048 aa6.27□□□□□ -1.41
SKP1-210ENST00000522855 NCLP19338 710 aaKnown RBP6.27□□□□□ -1.41
SKP1-210ENST00000522855 TNK2Q07912 1038 aa6.27□□□□□ -1.41
SKP1-210ENST00000522855 FZD5Q13467 585 aa6.27□□□□□ -1.41
SKP1-210ENST00000522855 SNW1Q13573 536 aaKnown RBP6.27□□□□□ -1.41
SKP1-210ENST00000522855 CWF19L1Q69YN2 538 aaKnown RBP6.27□□□□□ -1.41
SKP1-210ENST00000522855 TRIM59Q8IWR1 403 aa6.27□□□□□ -1.41
SKP1-210ENST00000522855 ARHGEF39Q8N4T4 335 aa6.27□□□□□ -1.41
SKP1-210ENST00000522855 PI4K2BQ8TCG2 481 aa6.27□□□□□ -1.41
SKP1-210ENST00000522855 FAM168AQ92567 244 aa6.27□□□□□ -1.41
SKP1-210ENST00000522855 CDC6Q99741 560 aa6.27□□□□□ -1.41
SKP1-210ENST00000522855 GPR62Q9BZJ7 368 aa6.27□□□□□ -1.41
SKP1-210ENST00000522855 NOL6Q9H6R4 1146 aaKnown RBP6.27□□□□□ -1.41
SKP1-210ENST00000522855 CHST7Q9NS84 486 aa6.27□□□□□ -1.41
SKP1-210ENST00000522855 SEMA3GQ9NS98 782 aa6.27□□□□□ -1.41
SKP1-210ENST00000522855 EMC9Q9Y3B6 208 aa6.27□□□□□ -1.41
SKP1-210ENST00000522855 ESYT3A0FGR9 886 aa6.26□□□□□ -1.41
SKP1-210ENST00000522855 PRAMEF1O95521 474 aa6.26□□□□□ -1.41
SKP1-210ENST00000522855 GSNP06396 782 aa6.26□□□□□ -1.41
SKP1-210ENST00000522855 PPP2R2AP63151 447 aa6.26□□□□□ -1.41
SKP1-210ENST00000522855 TCEA2Q15560 299 aa6.26□□□□□ -1.41
SKP1-210ENST00000522855 PLEKHG4Q58EX7 1191 aa6.26□□□□□ -1.41
SKP1-210ENST00000522855 EGFLAMQ63HQ2 1017 aa6.26□□□□□ -1.41
SKP1-210ENST00000522855 C16orf86Q6ZW13 317 aa6.26□□□□□ -1.41
SKP1-210ENST00000522855 TMC3Q7Z5M5 1100 aa6.26□□□□□ -1.41
SKP1-210ENST00000522855 THAP5Q7Z6K1 395 aa6.26□□□□□ -1.41
SKP1-210ENST00000522855 ZNF655Q8N720 491 aaPredicted RBP6.26□□□□□ -1.41
SKP1-210ENST00000522855 ZNF513Q8N8E2 541 aaPredicted RBP6.26□□□□□ -1.41
SKP1-210ENST00000522855 DAGLBQ8NCG7 672 aa6.26□□□□□ -1.41
SKP1-210ENST00000522855 ASB11Q8WXH4 323 aa6.26□□□□□ -1.41
SKP1-210ENST00000522855 BRF1Q92994 677 aa6.26□□□□□ -1.41
SKP1-210ENST00000522855 FEZ1Q99689 392 aa6.26□□□□□ -1.41
SKP1-210ENST00000522855 TMX1Q9H3N1 280 aa6.26□□□□□ -1.41
SKP1-210ENST00000522855 PRDM7Q9NQW5 492 aa6.26□□□□□ -1.41
SKP1-210ENST00000522855 ARHGEF4Q9NR80 690 aa6.26□□□□□ -1.41
SKP1-210ENST00000522855 FAM153BP0C7A2 387 aa6.25□□□□□ -1.41
SKP1-210ENST00000522855 FGFR1P11362 822 aa6.25□□□□□ -1.41
SKP1-210ENST00000522855 AMPD2Q01433 879 aa6.25□□□□□ -1.41
SKP1-210ENST00000522855 POU4F1Q01851 419 aa6.25□□□□□ -1.41
SKP1-210ENST00000522855 SQSTM1Q13501 440 aa6.25□□□□□ -1.41
SKP1-210ENST00000522855 PPP2R5DQ14738 602 aa6.25□□□□□ -1.41
SKP1-210ENST00000522855 MRGPRX3Q96LB0 322 aa6.25□□□□□ -1.41
SKP1-210ENST00000522855 ZDHHC15Q96MV8 337 aa6.25□□□□□ -1.41
SKP1-210ENST00000522855 HDAC8Q9BY41 377 aa6.25□□□□□ -1.41
SKP1-210ENST00000522855 CTNND2Q9UQB3 1225 aa6.25□□□□□ -1.41
SKP1-210ENST00000522855 NACADO15069 1562 aa6.25□□□□□ -1.41
SKP1-210ENST00000522855 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.24□□□□□ -1.41
SKP1-210ENST00000522855 RBAK-RBAKDNI3L0D1 243 aa6.24□□□□□ -1.41
SKP1-210ENST00000522855 KCNH1O95259 989 aa6.24□□□□□ -1.41
SKP1-210ENST00000522855 ENDOUP21128 410 aaKnown RBP6.24□□□□□ -1.41
SKP1-210ENST00000522855 IKZF1Q13422 519 aa6.24□□□□□ -1.41
SKP1-210ENST00000522855 ZNF648Q5T619 568 aaPredicted RBP6.24□□□□□ -1.41
SKP1-210ENST00000522855 CDKAL1Q5VV42 579 aa6.24□□□□□ -1.41
SKP1-210ENST00000522855 CCDC140Q96MF4 163 aa6.24□□□□□ -1.41
SKP1-210ENST00000522855 KANSL2Q9H9L4 492 aa6.24□□□□□ -1.41
SKP1-210ENST00000522855 C19orf73Q9NVV2 129 aa6.24□□□□□ -1.41
SKP1-210ENST00000522855 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.24□□□□□ -1.41
SKP1-210ENST00000522855 ST14Q9Y5Y6 855 aa6.24□□□□□ -1.41
SKP1-210ENST00000522855 MYO15BQ96JP2 1530 aa6.24□□□□□ -1.41
SKP1-210ENST00000522855 RB1CC1Q8TDY2 1594 aa6.23□□□□□ -1.41
SKP1-210ENST00000522855 TRBV23-1A0A0A0MS06 115 aa6.23□□□□□ -1.41
SKP1-210ENST00000522855 SHISA3A0PJX4 238 aa6.23□□□□□ -1.41
SKP1-210ENST00000522855 ANKRD62A6NC57 917 aa6.23□□□□□ -1.41
SKP1-210ENST00000522855 H0Y8X5 98 aa6.23□□□□□ -1.41
SKP1-210ENST00000522855 MEIS1O00470 390 aa6.23□□□□□ -1.41
SKP1-210ENST00000522855 SRFP11831 508 aa6.23□□□□□ -1.41
SKP1-210ENST00000522855 SUMO1P63165 101 aaKnown RBP6.23□□□□□ -1.41
SKP1-210ENST00000522855 ZP2Q05996 745 aa6.23□□□□□ -1.41
SKP1-210ENST00000522855 LCE1DQ5T752 114 aa6.23□□□□□ -1.41
SKP1-210ENST00000522855 GTF2IRD2BQ6EKJ0 949 aa6.23□□□□□ -1.41
SKP1-210ENST00000522855 KIAA0907Q7Z7F0 614 aaPredicted RBP6.23□□□□□ -1.41
SKP1-210ENST00000522855 GTF2IRD2Q86UP8 949 aa6.23□□□□□ -1.41
SKP1-210ENST00000522855 TSPYL5Q86VY4 417 aaPredicted RBP6.23□□□□□ -1.41
SKP1-210ENST00000522855 SCUBE1Q8IWY4 988 aa6.23□□□□□ -1.41
SKP1-210ENST00000522855 BTN2A2Q8WVV5 523 aa6.23□□□□□ -1.41
SKP1-210ENST00000522855 NKX2-4Q9H2Z4 354 aa6.23□□□□□ -1.41
SKP1-210ENST00000522855 DNAJC25-GNG10A0A024R161 153 aa6.22□□□□□ -1.41
SKP1-210ENST00000522855 ZNF503-AS2A6NEH8 195 aa6.22□□□□□ -1.41
SKP1-210ENST00000522855 H3BS24 57 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms