RNA–Protein interactions for RNA: ENST00000522746.5

FAM49B-223, Transcript of family with sequence similarity 49 member B, human

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-223	ENST00000522746	GDF11	O95390	407 aa		18.92	■□□□□ 0.62
FAM49B-223	ENST00000522746	TPM4	P67936	248 aa		18.92	■□□□□ 0.62
FAM49B-223	ENST00000522746	MYL5	Q02045	173 aa		18.92	■□□□□ 0.62
FAM49B-223	ENST00000522746	CXCL9	Q07325	125 aa		18.92	■□□□□ 0.62
FAM49B-223	ENST00000522746	NONO	Q15233	471 aa	Known RBP eCLIP	18.92	■□□□□ 0.62
FAM49B-223	ENST00000522746	E2F4	Q16254	413 aa		18.92	■□□□□ 0.62
FAM49B-223	ENST00000522746	ESYT2	A0FGR8	921 aa		18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	RAD21	O60216	631 aa		18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	PPP1R11	O60927	126 aa	Predicted RBP	18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	ENTPD3	O75355	529 aa		18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	LONP1	P36776	959 aa	Known RBP	18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	LRMP	Q12912	555 aa		18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	SEPT2	Q15019	361 aa		18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	JAKMIP3	Q5VZ66	844 aa		18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	STAM	Q92783	540 aa		18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	ATRNL1	Q5VV63	1379 aa		18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	BRCA1	P38398	1863 aa	Known RBP	18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	SPDYE2B	A6NHP3	402 aa		18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	hCG_1984214	I3L0E3	225 aa		18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	OFD1	O75665	1012 aa		18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	SPDYE6	P0CI01	402 aa		18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	ATP1A3	P13637	1013 aa		18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	RASSF7	Q02833	373 aa		18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	LETM2	Q2VYF4	491 aa		18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	GPATCH4	Q5T3I0	446 aa	Known RBP	18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	SIAH1	Q8IUQ4	282 aa		18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	REXO1	Q8N1G1	1221 aa	Known RBP	18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	ZNF713	Q8N859	430 aa	Predicted RBP	18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	XPO4	Q9C0E2	1151 aa	Known RBP	18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	TAOK3	Q9H2K8	898 aa		18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	KANSL2	Q9H9L4	492 aa		18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	IFNK	Q9P0W0	207 aa		18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	SCAF8	Q9UPN6	1271 aa	Known RBP	18.91	■□□□□ 0.62
FAM49B-223	ENST00000522746	USP17L10	C9JJH3	530 aa		18.9	■□□□□ 0.62
FAM49B-223	ENST00000522746	PRELP	P51888	382 aa		18.9	■□□□□ 0.62
FAM49B-223	ENST00000522746	DTHD1	Q6ZMT9	781 aa		18.9	■□□□□ 0.62
FAM49B-223	ENST00000522746	CDAN1	Q8IWY9	1227 aa		18.9	■□□□□ 0.62
FAM49B-223	ENST00000522746	NYAP2	Q9P242	653 aa		18.9	■□□□□ 0.62
FAM49B-223	ENST00000522746	PNMA6F	A0A0J9YX94	578 aa		18.89	■□□□□ 0.62
FAM49B-223	ENST00000522746	CCNT1	O60563	726 aa	Known RBP	18.89	■□□□□ 0.62
FAM49B-223	ENST00000522746	SMC2	O95347	1197 aa		18.89	■□□□□ 0.62
FAM49B-223	ENST00000522746	JAG1	P78504	1218 aa		18.89	■□□□□ 0.62
FAM49B-223	ENST00000522746	DPYD	Q12882	1025 aa		18.89	■□□□□ 0.62
FAM49B-223	ENST00000522746	PPP4R3B	Q5MIZ7	849 aa		18.89	■□□□□ 0.62
FAM49B-223	ENST00000522746	NEK8	Q86SG6	692 aa		18.89	■□□□□ 0.62
FAM49B-223	ENST00000522746	TRIML1	Q8N9V2	468 aa		18.89	■□□□□ 0.62
FAM49B-223	ENST00000522746	IQUB	Q8NA54	791 aa		18.89	■□□□□ 0.62
FAM49B-223	ENST00000522746	TBCK	Q8TEA7	893 aa		18.89	■□□□□ 0.62
FAM49B-223	ENST00000522746	MKL1	Q969V6	931 aa		18.89	■□□□□ 0.62
FAM49B-223	ENST00000522746	CCDC34	Q96HJ3	373 aa		18.89	■□□□□ 0.62
FAM49B-223	ENST00000522746	CSRNP1	Q96S65	589 aa		18.89	■□□□□ 0.62
FAM49B-223	ENST00000522746	SRCAP	Q6ZRS2	3230 aa		18.89	■□□□□ 0.61
FAM49B-223	ENST00000522746	PP2D1	A8MPX8	630 aa		18.89	■□□□□ 0.61
FAM49B-223	ENST00000522746	ADCY7	P51828	1080 aa		18.89	■□□□□ 0.61
FAM49B-223	ENST00000522746	ICA1	Q05084	483 aa		18.89	■□□□□ 0.61
FAM49B-223	ENST00000522746	FMR1	Q06787	632 aa	Known RBP eCLIP	18.89	■□□□□ 0.61	2e-7	■■■■■ 29.4
FAM49B-223	ENST00000522746	RRP1B	Q14684	758 aa	Known RBP	18.89	■□□□□ 0.61
FAM49B-223	ENST00000522746	ABCB5	Q2M3G0	1257 aa		18.89	■□□□□ 0.61
FAM49B-223	ENST00000522746	PDXDC2P	Q6P474	469 aa		18.89	■□□□□ 0.61
FAM49B-223	ENST00000522746	MLKL	Q8NB16	471 aa		18.89	■□□□□ 0.61
FAM49B-223	ENST00000522746	KIAA1524	Q8TCG1	905 aa		18.89	■□□□□ 0.61
FAM49B-223	ENST00000522746	ARID5B	Q14865	1188 aa		18.88	■□□□□ 0.61
FAM49B-223	ENST00000522746	NOLC1	Q14978	699 aa	Known RBP eCLIP	18.88	■□□□□ 0.61
FAM49B-223	ENST00000522746	KARS	Q15046	597 aa	Known RBP	18.88	■□□□□ 0.61
FAM49B-223	ENST00000522746	DLGAP5	Q15398	846 aa		18.88	■□□□□ 0.61
FAM49B-223	ENST00000522746	TMEM179	Q6ZVK1	233 aa		18.88	■□□□□ 0.61
FAM49B-223	ENST00000522746	CACTIN	Q8WUQ7	758 aa	Known RBP	18.88	■□□□□ 0.61
FAM49B-223	ENST00000522746	FANCL	Q9NW38	375 aa		18.88	■□□□□ 0.61
FAM49B-223	ENST00000522746	FER1L6	Q2WGJ9	1857 aa		18.88	■□□□□ 0.61
FAM49B-223	ENST00000522746	FANCC	Q00597	558 aa		18.88	■□□□□ 0.61
FAM49B-223	ENST00000522746	MTR	Q99707	1265 aa		18.88	■□□□□ 0.61
FAM49B-223	ENST00000522746	BLZF1	Q9H2G9	400 aa		18.88	■□□□□ 0.61
FAM49B-223	ENST00000522746	ZNF70	Q9UC06	446 aa	Predicted RBP	18.88	■□□□□ 0.61
FAM49B-223	ENST00000522746	COL2A1	P02458	1487 aa	Predicted RBP	18.87	■□□□□ 0.61
FAM49B-223	ENST00000522746	LAD1	O00515	517 aa		18.87	■□□□□ 0.61
FAM49B-223	ENST00000522746	ZBTB5	O15062	677 aa		18.87	■□□□□ 0.61
FAM49B-223	ENST00000522746	SLC1A4	P43007	532 aa		18.87	■□□□□ 0.61
FAM49B-223	ENST00000522746	SLFN13	Q68D06	897 aa		18.87	■□□□□ 0.61
FAM49B-223	ENST00000522746	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	18.87	■□□□□ 0.61
FAM49B-223	ENST00000522746	FILIP1	Q7Z7B0	1213 aa		18.87	■□□□□ 0.61
FAM49B-223	ENST00000522746	TRMT44	Q8IYL2	757 aa	Known RBP	18.87	■□□□□ 0.61
FAM49B-223	ENST00000522746	MTMR8	Q96EF0	704 aa		18.87	■□□□□ 0.61
FAM49B-223	ENST00000522746	TXLNA	P40222	546 aa		18.86	■□□□□ 0.61
FAM49B-223	ENST00000522746	PRPH	P41219	470 aa		18.86	■□□□□ 0.61
FAM49B-223	ENST00000522746	MED15	Q96RN5	788 aa		18.86	■□□□□ 0.61
FAM49B-223	ENST00000522746	VEZT	Q9HBM0	779 aa		18.86	■□□□□ 0.61
FAM49B-223	ENST00000522746	TMOD2	Q9NZR1	351 aa		18.86	■□□□□ 0.61
FAM49B-223	ENST00000522746	NEMF	O60524	1076 aa		18.86	■□□□□ 0.61
FAM49B-223	ENST00000522746	EGFR	P00533	1210 aa		18.86	■□□□□ 0.61
FAM49B-223	ENST00000522746	GH2	P01242	217 aa		18.86	■□□□□ 0.61
FAM49B-223	ENST00000522746	OR52Z1	P0C646	297 aa		18.86	■□□□□ 0.61
FAM49B-223	ENST00000522746	UBE2S	Q16763	222 aa		18.86	■□□□□ 0.61
FAM49B-223	ENST00000522746	OGFOD1	Q8N543	542 aa		18.86	■□□□□ 0.61
FAM49B-223	ENST00000522746	DCAF4	Q8WV16	495 aa		18.86	■□□□□ 0.61
FAM49B-223	ENST00000522746	DPF2	Q92785	391 aa		18.86	■□□□□ 0.61
FAM49B-223	ENST00000522746	PYM1	Q9BRP8	204 aa	Known RBP	18.86	■□□□□ 0.61
FAM49B-223	ENST00000522746	DACH1	Q9UI36	760 aa		18.86	■□□□□ 0.61
FAM49B-223	ENST00000522746	HDAC9	Q9UKV0	1011 aa		18.86	■□□□□ 0.61
FAM49B-223	ENST00000522746	CD2AP	Q9Y5K6	639 aa		18.86	■□□□□ 0.61
FAM49B-223	ENST00000522746	NBPF9	Q3BBW0	867 aa		18.85	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms