RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 ARHGEF10LQ9HCE6 1279 aa15.28■□□□□ 0.04
SYNPO-205ENST00000522122 MYO5BQ9ULV0 1848 aa15.28■□□□□ 0.04
SYNPO-205ENST00000522122 ABCC12Q96J65 1359 aa15.28■□□□□ 0.04
SYNPO-205ENST00000522122 CCDC151A5D8V7 595 aa15.27■□□□□ 0.04
SYNPO-205ENST00000522122 EXOC3O60645 756 aa15.27■□□□□ 0.04
SYNPO-205ENST00000522122 CEP63Q96MT8 703 aa15.27■□□□□ 0.04
SYNPO-205ENST00000522122 PDE11AQ9HCR9 933 aa15.27■□□□□ 0.04
SYNPO-205ENST00000522122 RPN1P04843 607 aaKnown RBP15.27■□□□□ 0.04
SYNPO-205ENST00000522122 ZNF365Q70YC5 407 aa15.27■□□□□ 0.04
SYNPO-205ENST00000522122 MYOCDQ8IZQ8 938 aa15.27■□□□□ 0.04
SYNPO-205ENST00000522122 ATP8A2Q9NTI2 1148 aa15.27■□□□□ 0.04
SYNPO-205ENST00000522122 OVOS2A0A0G2JMS6 1433 aa15.27■□□□□ 0.04
SYNPO-205ENST00000522122 DDAH1O94760 285 aa15.27■□□□□ 0.04
SYNPO-205ENST00000522122 PCP11498 1178 aaKnown RBP15.27■□□□□ 0.04
SYNPO-205ENST00000522122 CASP14P31944 242 aa15.27■□□□□ 0.04
SYNPO-205ENST00000522122 MAP3K9P80192 1104 aa15.27■□□□□ 0.04
SYNPO-205ENST00000522122 MYCT1Q8N699 235 aa15.27■□□□□ 0.04
SYNPO-205ENST00000522122 CCDC63Q8NA47 563 aa15.27■□□□□ 0.04
SYNPO-205ENST00000522122 UIMC1Q96RL1 719 aa15.27■□□□□ 0.04
SYNPO-205ENST00000522122 RNF26Q9BY78 433 aaPredicted RBP15.27■□□□□ 0.04
SYNPO-205ENST00000522122 SRPRBQ9Y5M8 271 aaKnown RBP15.27■□□□□ 0.04
SYNPO-205ENST00000522122 GCNT3O95395 438 aa15.27■□□□□ 0.03
SYNPO-205ENST00000522122 ALDH3A1P30838 453 aa15.27■□□□□ 0.03
SYNPO-205ENST00000522122 TECP42680 631 aa15.27■□□□□ 0.03
SYNPO-205ENST00000522122 GALNT17Q6IS24 598 aa15.27■□□□□ 0.03
SYNPO-205ENST00000522122 CABS1Q96KC9 395 aa15.27■□□□□ 0.03
SYNPO-205ENST00000522122 MRPL44Q9H9J2 332 aaKnown RBP15.27■□□□□ 0.03
SYNPO-205ENST00000522122 OR52Z1P0C646 297 aa15.26■□□□□ 0.03
SYNPO-205ENST00000522122 IFNAR1P17181 557 aa15.26■□□□□ 0.03
SYNPO-205ENST00000522122 LONP1P36776 959 aaKnown RBP15.26■□□□□ 0.03
SYNPO-205ENST00000522122 PTPN21Q16825 1174 aa15.26■□□□□ 0.03
SYNPO-205ENST00000522122 DPH6Q7L8W6 267 aa15.26■□□□□ 0.03
SYNPO-205ENST00000522122 PPM1EQ8WY54 764 aa15.26■□□□□ 0.03
SYNPO-205ENST00000522122 HYOU1Q9Y4L1 999 aa15.26■□□□□ 0.03
SYNPO-205ENST00000522122 KLRF2D3W0D1 207 aa15.26■□□□□ 0.03
SYNPO-205ENST00000522122 FERP16591 822 aa15.26■□□□□ 0.03
SYNPO-205ENST00000522122 TCP1P17987 556 aaKnown RBP15.26■□□□□ 0.03
SYNPO-205ENST00000522122 COPB1P53618 953 aaKnown RBP15.26■□□□□ 0.03
SYNPO-205ENST00000522122 GBP6Q6ZN66 633 aa15.26■□□□□ 0.03
SYNPO-205ENST00000522122 SOWAHDA6NJG2 315 aa15.26■□□□□ 0.03
SYNPO-205ENST00000522122 LIFRP42702 1097 aa15.26■□□□□ 0.03
SYNPO-205ENST00000522122 NEK8Q86SG6 692 aa15.26■□□□□ 0.03
SYNPO-205ENST00000522122 EXOC4Q96A65 974 aa15.26■□□□□ 0.03
SYNPO-205ENST00000522122 RBM26Q5T8P6 1007 aaKnown RBP15.26■□□□□ 0.03
SYNPO-205ENST00000522122 TOGARAM2Q6ZUX3 1019 aa15.26■□□□□ 0.03
SYNPO-205ENST00000522122 SLC35F6Q8N357 371 aa15.26■□□□□ 0.03
SYNPO-205ENST00000522122 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.26■□□□□ 0.03
SYNPO-205ENST00000522122 LACTBP83111 547 aaPredicted RBP15.25■□□□□ 0.03
SYNPO-205ENST00000522122 MTMR3Q13615 1198 aa15.25■□□□□ 0.03
SYNPO-205ENST00000522122 CEP128Q6ZU80 1094 aa15.25■□□□□ 0.03
SYNPO-205ENST00000522122 DNAJC5Q9H3Z4 198 aa15.25■□□□□ 0.03
SYNPO-205ENST00000522122 EXOC7Q9UPT5 735 aa15.25■□□□□ 0.03
SYNPO-205ENST00000522122 TAF6LQ9Y6J9 622 aa15.25■□□□□ 0.03
SYNPO-205ENST00000522122 KIF28PB7ZC32 967 aa15.25■□□□□ 0.03
SYNPO-205ENST00000522122 BCRP11274 1271 aa15.25■□□□□ 0.03
SYNPO-205ENST00000522122 ARHGAP25P42331 645 aa15.25■□□□□ 0.03
SYNPO-205ENST00000522122 CHRNDQ07001 517 aa15.25■□□□□ 0.03
SYNPO-205ENST00000522122 E4F1Q66K89 784 aaPredicted RBP15.25■□□□□ 0.03
SYNPO-205ENST00000522122 INTS8Q75QN2 995 aaKnown RBP15.25■□□□□ 0.03
SYNPO-205ENST00000522122 AIFM3Q96NN9 605 aa15.25■□□□□ 0.03
SYNPO-205ENST00000522122 SLAIN2Q9P270 581 aa15.25■□□□□ 0.03
SYNPO-205ENST00000522122 IFT74Q96LB3 600 aa15.25■□□□□ 0.03
SYNPO-205ENST00000522122 SAMSN1Q9NSI8 373 aaKnown RBP15.25■□□□□ 0.03
SYNPO-205ENST00000522122 PCDHA12Q9UN75 941 aa15.25■□□□□ 0.03
SYNPO-205ENST00000522122 COMMD10Q9Y6G5 202 aa15.25■□□□□ 0.03
SYNPO-205ENST00000522122 KDM3AQ9Y4C1 1321 aa15.25■□□□□ 0.03
SYNPO-205ENST00000522122 MON2Q7Z3U7 1717 aa15.25■□□□□ 0.03
SYNPO-205ENST00000522122 TMEM232C9JQI7 657 aa15.25■□□□□ 0.03
SYNPO-205ENST00000522122 PCDHB13Q9Y5F0 798 aa15.25■□□□□ 0.03
SYNPO-205ENST00000522122 SLFN14P0C7P3 912 aa15.24■□□□□ 0.03
SYNPO-205ENST00000522122 ST3GAL1Q11201 340 aa15.24■□□□□ 0.03
SYNPO-205ENST00000522122 KRT71Q3SY84 523 aa15.24■□□□□ 0.03
SYNPO-205ENST00000522122 CC2D1AQ6P1N0 951 aaPredicted RBP15.24■□□□□ 0.03
SYNPO-205ENST00000522122 GPKOWQ92917 476 aaPredicted RBP eCLIP15.24■□□□□ 0.03
SYNPO-205ENST00000522122 LSM14BQ9BX40 385 aaKnown RBP15.24■□□□□ 0.03
SYNPO-205ENST00000522122 ASIC3Q9UHC3 531 aa15.24■□□□□ 0.03
SYNPO-205ENST00000522122 TRAPPC10P48553 1259 aa15.24■□□□□ 0.03
SYNPO-205ENST00000522122 FOXO4P98177 505 aa15.24■□□□□ 0.03
SYNPO-205ENST00000522122 CLUL1Q15846 466 aa15.24■□□□□ 0.03
SYNPO-205ENST00000522122 ZNF579Q8NAF0 562 aaKnown RBP15.24■□□□□ 0.03
SYNPO-205ENST00000522122 XRCC5P13010 732 aaKnown RBP15.24■□□□□ 0.03
SYNPO-205ENST00000522122 STAT1P42224 750 aa15.24■□□□□ 0.03
SYNPO-205ENST00000522122 MAEAQ7L5Y9 396 aa15.24■□□□□ 0.03
SYNPO-205ENST00000522122 GRAMD1CQ8IYS0 662 aa15.24■□□□□ 0.03
SYNPO-205ENST00000522122 JDP2Q8WYK2 163 aa15.24■□□□□ 0.03
SYNPO-205ENST00000522122 STIM2Q9P246 746 aa15.24■□□□□ 0.03
SYNPO-205ENST00000522122 SEMA3EO15041 775 aa15.24■□□□□ 0.03
SYNPO-205ENST00000522122 USH1GQ495M9 461 aa15.24■□□□□ 0.03
SYNPO-205ENST00000522122 LIN9Q5TKA1 542 aa15.24■□□□□ 0.03
SYNPO-205ENST00000522122 TXNDC16Q9P2K2 825 aa15.24■□□□□ 0.03
SYNPO-205ENST00000522122 CFBP00751 764 aa15.23■□□□□ 0.03
SYNPO-205ENST00000522122 MFSD14BQ5SR56 506 aa15.23■□□□□ 0.03
SYNPO-205ENST00000522122 TBC1D10CQ8IV04 446 aa15.23■□□□□ 0.03
SYNPO-205ENST00000522122 ENGASEQ8NFI3 743 aa15.23■□□□□ 0.03
SYNPO-205ENST00000522122 SERPINA10Q9UK55 444 aa15.23■□□□□ 0.03
SYNPO-205ENST00000522122 CTDNEP1O95476 244 aa15.23■□□□□ 0.03
SYNPO-205ENST00000522122 GPBP1Q86WP2 473 aa15.23■□□□□ 0.03
SYNPO-205ENST00000522122 ARMCX3Q9UH62 379 aaPredicted RBP15.23■□□□□ 0.03
SYNPO-205ENST00000522122 NPHP4O75161 1426 aaPredicted RBP15.23■□□□□ 0.03
SYNPO-205ENST00000522122 MYCNP04198 464 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms