RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 SCUBE3Q8IX30 993 aa13.42□□□□□ -0.26
CSMD1-210ENST00000521646 FTSJ3Q8IY81 847 aaKnown RBP13.42□□□□□ -0.26
CSMD1-210ENST00000521646 DNAJC2Q99543 621 aaKnown RBP13.42□□□□□ -0.26
CSMD1-210ENST00000521646 COL25A1Q9BXS0 654 aaPredicted RBP13.42□□□□□ -0.26
CSMD1-210ENST00000521646 CHD7Q9P2D1 2997 aa13.42□□□□□ -0.26
CSMD1-210ENST00000521646 MPHOSPH10O00566 681 aaKnown RBP13.41□□□□□ -0.26
CSMD1-210ENST00000521646 TLL1O43897 1013 aa13.41□□□□□ -0.26
CSMD1-210ENST00000521646 GCGRP47871 477 aa13.41□□□□□ -0.26
CSMD1-210ENST00000521646 CCNA1P78396 465 aa13.41□□□□□ -0.26
CSMD1-210ENST00000521646 COG2Q14746 738 aa13.41□□□□□ -0.26
CSMD1-210ENST00000521646 OLFML2BQ68BL8 750 aa13.41□□□□□ -0.26
CSMD1-210ENST00000521646 SLC39A5Q6ZMH5 540 aa13.41□□□□□ -0.26
CSMD1-210ENST00000521646 REPS2Q8NFH8 660 aa13.41□□□□□ -0.26
CSMD1-210ENST00000521646 FERMT2Q96AC1 680 aa13.41□□□□□ -0.26
CSMD1-210ENST00000521646 IRX2Q9BZI1 471 aaPredicted RBP13.41□□□□□ -0.26
CSMD1-210ENST00000521646 TANGO6Q9C0B7 1094 aa13.41□□□□□ -0.26
CSMD1-210ENST00000521646 TTYH1Q9H313 450 aaPredicted RBP13.41□□□□□ -0.26
CSMD1-210ENST00000521646 PDLIM7Q9NR12 457 aa13.41□□□□□ -0.26
CSMD1-210ENST00000521646 PLXNA1Q9UIW2 1896 aa13.4□□□□□ -0.26
CSMD1-210ENST00000521646 MBD4O95243 580 aa13.4□□□□□ -0.26
CSMD1-210ENST00000521646 PGK2P07205 417 aa13.4□□□□□ -0.26
CSMD1-210ENST00000521646 ADD2P35612 726 aa13.4□□□□□ -0.26
CSMD1-210ENST00000521646 FUT2Q10981 343 aa13.4□□□□□ -0.26
CSMD1-210ENST00000521646 LRRC41Q15345 812 aa13.4□□□□□ -0.26
CSMD1-210ENST00000521646 MAML3Q96JK9 1138 aa13.4□□□□□ -0.26
CSMD1-210ENST00000521646 PRKD2Q9BZL6 878 aa13.4□□□□□ -0.26
CSMD1-210ENST00000521646 BCL11AQ9H165 835 aa13.4□□□□□ -0.26
CSMD1-210ENST00000521646 CABP5Q9NP86 173 aa13.4□□□□□ -0.26
CSMD1-210ENST00000521646 ADAMTS5Q9UNA0 930 aa13.4□□□□□ -0.26
CSMD1-210ENST00000521646 ATP11BQ9Y2G3 1177 aa13.4□□□□□ -0.26
CSMD1-210ENST00000521646 TMX2Q9Y320 296 aa13.4□□□□□ -0.26
CSMD1-210ENST00000521646 ZBED9Q6R2W3 1325 aa13.39□□□□□ -0.27
CSMD1-210ENST00000521646 MYH7P12883 1935 aa13.39□□□□□ -0.27
CSMD1-210ENST00000521646 SEPT4O43236 478 aa13.39□□□□□ -0.27
CSMD1-210ENST00000521646 ADCYAP1R1P41586 468 aa13.39□□□□□ -0.27
CSMD1-210ENST00000521646 CDK8P49336 464 aa13.39□□□□□ -0.27
CSMD1-210ENST00000521646 SHCBP1Q8NEM2 672 aa13.39□□□□□ -0.27
CSMD1-210ENST00000521646 BADQ92934 168 aa13.39□□□□□ -0.27
CSMD1-210ENST00000521646 CRNKL1Q9BZJ0 848 aaKnown RBP13.39□□□□□ -0.27
CSMD1-210ENST00000521646 BOLA2Q9H3K6 86 aa13.39□□□□□ -0.27
CSMD1-210ENST00000521646 VCPKMTQ9H867 229 aa13.39□□□□□ -0.27
CSMD1-210ENST00000521646 CWC22Q9HCG8 908 aaKnown RBP13.39□□□□□ -0.27
CSMD1-210ENST00000521646 ZBTB40Q9NUA8 1239 aa13.39□□□□□ -0.27
CSMD1-210ENST00000521646 IVNS1ABPQ9Y6Y0 642 aa13.39□□□□□ -0.27
CSMD1-210ENST00000521646 ADCY6O43306 1168 aa13.38□□□□□ -0.27
CSMD1-210ENST00000521646 FLOT1O75955 427 aa13.38□□□□□ -0.27
CSMD1-210ENST00000521646 EEF2P13639 858 aaKnown RBP13.38□□□□□ -0.27
CSMD1-210ENST00000521646 ICA1Q05084 483 aa13.38□□□□□ -0.27
CSMD1-210ENST00000521646 PLS1Q14651 629 aa13.38□□□□□ -0.27
CSMD1-210ENST00000521646 C20orf194Q5TEA3 1177 aa13.38□□□□□ -0.27
CSMD1-210ENST00000521646 C12orf60Q5U649 245 aa13.38□□□□□ -0.27
CSMD1-210ENST00000521646 TMEM179Q6ZVK1 233 aa13.38□□□□□ -0.27
CSMD1-210ENST00000521646 DPP9Q86TI2 863 aa13.38□□□□□ -0.27
CSMD1-210ENST00000521646 CERS3Q8IU89 383 aa13.38□□□□□ -0.27
CSMD1-210ENST00000521646 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.38□□□□□ -0.27
CSMD1-210ENST00000521646 NUP88Q99567 741 aaPredicted RBP13.38□□□□□ -0.27
CSMD1-210ENST00000521646 TMUB1Q9BVT8 246 aa13.38□□□□□ -0.27
CSMD1-210ENST00000521646 PUS7LQ9H0K6 701 aaKnown RBP13.38□□□□□ -0.27
CSMD1-210ENST00000521646 ZNF214Q9UL59 606 aaPredicted RBP13.38□□□□□ -0.27
CSMD1-210ENST00000521646 COG6Q9Y2V7 657 aa13.38□□□□□ -0.27
CSMD1-210ENST00000521646 TTC28Q96AY4 2481 aa13.37□□□□□ -0.27
CSMD1-210ENST00000521646 MYADML2A6NDP7 307 aa13.37□□□□□ -0.27
CSMD1-210ENST00000521646 USP17L12C9JPN9 530 aa13.37□□□□□ -0.27
CSMD1-210ENST00000521646 USP17L21D6R901 530 aa13.37□□□□□ -0.27
CSMD1-210ENST00000521646 SMARCA5O60264 1052 aaPredicted RBP13.37□□□□□ -0.27
CSMD1-210ENST00000521646 GLRX3O76003 335 aaKnown RBP13.37□□□□□ -0.27
CSMD1-210ENST00000521646 PGK1P00558 417 aa13.37□□□□□ -0.27
CSMD1-210ENST00000521646 ZNF865P0CJ78 1059 aaPredicted RBP13.37□□□□□ -0.27
CSMD1-210ENST00000521646 FAM109BQ6ICB4 259 aaPredicted RBP13.37□□□□□ -0.27
CSMD1-210ENST00000521646 CTR9Q6PD62 1173 aa13.37□□□□□ -0.27
CSMD1-210ENST00000521646 C16orf86Q6ZW13 317 aa13.37□□□□□ -0.27
CSMD1-210ENST00000521646 NCAPG2Q86XI2 1143 aa13.37□□□□□ -0.27
CSMD1-210ENST00000521646 ERC1Q8IUD2 1116 aa13.37□□□□□ -0.27
CSMD1-210ENST00000521646 FGD4Q96M96 766 aa13.37□□□□□ -0.27
CSMD1-210ENST00000521646 CDX2Q99626 313 aaPredicted RBP13.37□□□□□ -0.27
CSMD1-210ENST00000521646 PAG1Q9NWQ8 432 aa13.37□□□□□ -0.27
CSMD1-210ENST00000521646 HOXC10Q9NYD6 342 aa13.37□□□□□ -0.27
CSMD1-210ENST00000521646 RIPK3Q9Y572 518 aa13.37□□□□□ -0.27
CSMD1-210ENST00000521646 XIRP2A4UGR9 3374 aa13.36□□□□□ -0.27
CSMD1-210ENST00000521646 STRNO43815 780 aa13.36□□□□□ -0.27
CSMD1-210ENST00000521646 MSCO60682 206 aa13.36□□□□□ -0.27
CSMD1-210ENST00000521646 ZMYND10O75800 440 aa13.36□□□□□ -0.27
CSMD1-210ENST00000521646 PTGS1P23219 599 aa13.36□□□□□ -0.27
CSMD1-210ENST00000521646 TTF1Q15361 905 aaPredicted RBP13.36□□□□□ -0.27
CSMD1-210ENST00000521646 ZNF792Q3KQV3 632 aa13.36□□□□□ -0.27
CSMD1-210ENST00000521646 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.36□□□□□ -0.27
CSMD1-210ENST00000521646 HAUS7Q99871 368 aa13.36□□□□□ -0.27
CSMD1-210ENST00000521646 PRDM5Q9NQX1 630 aaPredicted RBP13.36□□□□□ -0.27
CSMD1-210ENST00000521646 MCM3APO60318 1980 aa13.36□□□□□ -0.27
CSMD1-210ENST00000521646 RBAK-RBAKDNI3L0D1 243 aa13.35□□□□□ -0.27
CSMD1-210ENST00000521646 VWA5AO00534 786 aa13.35□□□□□ -0.27
CSMD1-210ENST00000521646 ADAMTS4O75173 837 aa13.35□□□□□ -0.27
CSMD1-210ENST00000521646 ATP5JP18859 108 aa13.35□□□□□ -0.27
CSMD1-210ENST00000521646 TLE2Q04725 743 aa13.35□□□□□ -0.27
CSMD1-210ENST00000521646 FAM83BQ5T0W9 1011 aa13.35□□□□□ -0.27
CSMD1-210ENST00000521646 TSHZ3Q63HK5 1081 aa13.35□□□□□ -0.27
CSMD1-210ENST00000521646 TMED8Q6PL24 325 aaPredicted RBP13.35□□□□□ -0.27
CSMD1-210ENST00000521646 ABRAQ8N0Z2 381 aa13.35□□□□□ -0.27
CSMD1-210ENST00000521646 STK11IPQ8N1F8 1099 aa13.35□□□□□ -0.27
CSMD1-210ENST00000521646 KIF1BPQ96EK5 621 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms