RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 COL11A1P12107 1806 aaPredicted RBP13.73□□□□□ -0.21
MRPS28-206ENST00000520946 PBX2P40425 430 aa13.72□□□□□ -0.21
MRPS28-206ENST00000520946 GJA9P57773 515 aa13.72□□□□□ -0.21
MRPS28-206ENST00000520946 TNFAIP2Q03169 654 aa13.72□□□□□ -0.21
MRPS28-206ENST00000520946 AKNAD1Q5T1N1 836 aa13.72□□□□□ -0.21
MRPS28-206ENST00000520946 GPATCH3Q96I76 525 aa13.72□□□□□ -0.21
MRPS28-206ENST00000520946 PUS7LQ9H0K6 701 aaKnown RBP13.72□□□□□ -0.21
MRPS28-206ENST00000520946 DNAJC25-GNG10A0A024R161 153 aa13.71□□□□□ -0.21
MRPS28-206ENST00000520946 ASB14A6NK59 587 aa13.71□□□□□ -0.21
MRPS28-206ENST00000520946 ATP2A1O14983 1001 aa13.71□□□□□ -0.21
MRPS28-206ENST00000520946 CABYRO75952 493 aa13.71□□□□□ -0.21
MRPS28-206ENST00000520946 SLC3A2P08195 630 aaKnown RBP13.71□□□□□ -0.21
MRPS28-206ENST00000520946 RASA1P20936 1047 aa13.71□□□□□ -0.21
MRPS28-206ENST00000520946 CYP2C18P33260 490 aa13.71□□□□□ -0.21
MRPS28-206ENST00000520946 CDK7P50613 346 aa13.71□□□□□ -0.21
MRPS28-206ENST00000520946 SKIV2LQ15477 1246 aaKnown RBP13.71□□□□□ -0.21
MRPS28-206ENST00000520946 LRRFIP1Q32MZ4 808 aaKnown RBP13.71□□□□□ -0.21
MRPS28-206ENST00000520946 SBK1Q52WX2 424 aa13.71□□□□□ -0.21
MRPS28-206ENST00000520946 CCSAPQ6IQ19 270 aaPredicted RBP13.71□□□□□ -0.21
MRPS28-206ENST00000520946 CCDC144CPQ8IYA2 1237 aa13.71□□□□□ -0.21
MRPS28-206ENST00000520946 RPUSD2Q8IZ73 545 aaKnown RBP13.71□□□□□ -0.21
MRPS28-206ENST00000520946 MICALL1Q8N3F8 863 aa13.71□□□□□ -0.21
MRPS28-206ENST00000520946 ASB2Q96Q27 587 aa13.71□□□□□ -0.21
MRPS28-206ENST00000520946 LRRCC1Q9C099 1032 aa13.71□□□□□ -0.21
MRPS28-206ENST00000520946 HIPK3Q9H422 1215 aa13.71□□□□□ -0.21
MRPS28-206ENST00000520946 IL23AQ9NPF7 189 aa13.71□□□□□ -0.21
MRPS28-206ENST00000520946 COG6Q9Y2V7 657 aa13.71□□□□□ -0.21
MRPS28-206ENST00000520946 ZBBXA8MT70 800 aa13.7□□□□□ -0.22
MRPS28-206ENST00000520946 TTLL1O95922 423 aa13.7□□□□□ -0.22
MRPS28-206ENST00000520946 CHGBP05060 677 aa13.7□□□□□ -0.22
MRPS28-206ENST00000520946 TSPY3P0CV98 308 aa13.7□□□□□ -0.22
MRPS28-206ENST00000520946 TSPY8P0CW00 308 aa13.7□□□□□ -0.22
MRPS28-206ENST00000520946 FDX1P10109 184 aa13.7□□□□□ -0.22
MRPS28-206ENST00000520946 BMP3P12645 472 aa13.7□□□□□ -0.22
MRPS28-206ENST00000520946 GNAT2P19087 354 aa13.7□□□□□ -0.22
MRPS28-206ENST00000520946 OAZ1P54368 228 aa13.7□□□□□ -0.22
MRPS28-206ENST00000520946 BEX3Q00994 111 aa13.7□□□□□ -0.22
MRPS28-206ENST00000520946 SLFN13Q68D06 897 aa13.7□□□□□ -0.22
MRPS28-206ENST00000520946 GIMAP6Q6P9H5 292 aa13.7□□□□□ -0.22
MRPS28-206ENST00000520946 CXCL17Q6UXB2 119 aa13.7□□□□□ -0.22
MRPS28-206ENST00000520946 OTOP2Q7RTS6 562 aa13.7□□□□□ -0.22
MRPS28-206ENST00000520946 FAM126BQ8IXS8 530 aa13.7□□□□□ -0.22
MRPS28-206ENST00000520946 LRRC47Q8N1G4 583 aaKnown RBP13.7□□□□□ -0.22
MRPS28-206ENST00000520946 ADAMTS19Q8TE59 1207 aa13.7□□□□□ -0.22
MRPS28-206ENST00000520946 CHURC1Q8WUH1 139 aa13.7□□□□□ -0.22
MRPS28-206ENST00000520946 STRBPQ96SI9 672 aaKnown RBP13.7□□□□□ -0.22
MRPS28-206ENST00000520946 NACAP1Q9BZK3 213 aa13.7□□□□□ -0.22
MRPS28-206ENST00000520946 UPF3AQ9H1J1 476 aaKnown RBP13.7□□□□□ -0.22
MRPS28-206ENST00000520946 NKX2-4Q9H2Z4 354 aa13.7□□□□□ -0.22
MRPS28-206ENST00000520946 ACAD9Q9H845 621 aa13.7□□□□□ -0.22
MRPS28-206ENST00000520946 SLC38A10Q9HBR0 1119 aa13.7□□□□□ -0.22
MRPS28-206ENST00000520946 DNAH12Q6ZR08 3092 aa13.69□□□□□ -0.22
MRPS28-206ENST00000520946 TMEM232C9JQI7 657 aa13.69□□□□□ -0.22
MRPS28-206ENST00000520946 DYNC1LI2O43237 492 aaPredicted RBP13.69□□□□□ -0.22
MRPS28-206ENST00000520946 PRDM1O75626 825 aa13.69□□□□□ -0.22
MRPS28-206ENST00000520946 CCL23P55773 120 aa13.69□□□□□ -0.22
MRPS28-206ENST00000520946 IRX5P78411 483 aaPredicted RBP13.69□□□□□ -0.22
MRPS28-206ENST00000520946 PDE4BQ07343 736 aa13.69□□□□□ -0.22
MRPS28-206ENST00000520946 ITGA7Q13683 1181 aa13.69□□□□□ -0.22
MRPS28-206ENST00000520946 FSCN1Q16658 493 aaKnown RBP13.69□□□□□ -0.22
MRPS28-206ENST00000520946 C16orf59Q7L2K0 433 aa13.69□□□□□ -0.22
MRPS28-206ENST00000520946 TLK2Q86UE8 772 aa13.69□□□□□ -0.22
MRPS28-206ENST00000520946 HERVK_113Q902F9 699 aa13.69□□□□□ -0.22
MRPS28-206ENST00000520946 CHMP4CQ96CF2 233 aa13.69□□□□□ -0.22
MRPS28-206ENST00000520946 UHRF1Q96T88 793 aaPredicted RBP13.69□□□□□ -0.22
MRPS28-206ENST00000520946 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.69□□□□□ -0.22
MRPS28-206ENST00000520946 SEZ6LQ9BYH1 1024 aa13.69□□□□□ -0.22
MRPS28-206ENST00000520946 ECHDC1Q9NTX5 307 aa13.69□□□□□ -0.22
MRPS28-206ENST00000520946 SLC4A7Q9Y6M7 1214 aa13.69□□□□□ -0.22
MRPS28-206ENST00000520946 MYO9BQ13459 2157 aa13.69□□□□□ -0.22
MRPS28-206ENST00000520946 UNC80Q8N2C7 3258 aa13.68□□□□□ -0.22
MRPS28-206ENST00000520946 ALAS1P13196 640 aa13.68□□□□□ -0.22
MRPS28-206ENST00000520946 SLC1A4P43007 532 aa13.68□□□□□ -0.22
MRPS28-206ENST00000520946 STAT2P52630 851 aa13.68□□□□□ -0.22
MRPS28-206ENST00000520946 CNTN2Q02246 1040 aa13.68□□□□□ -0.22
MRPS28-206ENST00000520946 AAK1Q2M2I8 961 aa13.68□□□□□ -0.22
MRPS28-206ENST00000520946 PPP4R3BQ5MIZ7 849 aa13.68□□□□□ -0.22
MRPS28-206ENST00000520946 PPP2R2DQ66LE6 453 aa13.68□□□□□ -0.22
MRPS28-206ENST00000520946 FAM160B2Q86V87 743 aa13.68□□□□□ -0.22
MRPS28-206ENST00000520946 APPBP2Q92624 585 aa13.68□□□□□ -0.22
MRPS28-206ENST00000520946 CEP95Q96GE4 821 aa13.68□□□□□ -0.22
MRPS28-206ENST00000520946 GPHNQ9NQX3 736 aaPredicted RBP13.68□□□□□ -0.22
MRPS28-206ENST00000520946 RNF146Q9NTX7 359 aa13.68□□□□□ -0.22
MRPS28-206ENST00000520946 MTMR4Q9NYA4 1195 aa13.68□□□□□ -0.22
MRPS28-206ENST00000520946 PARP14Q460N5 1801 aa13.68□□□□□ -0.22
MRPS28-206ENST00000520946 GSG1L2A8MUP6 293 aa13.67□□□□□ -0.22
MRPS28-206ENST00000520946 RNF113AO15541 343 aaKnown RBP13.67□□□□□ -0.22
MRPS28-206ENST00000520946 ZFYP08048 801 aaPredicted RBP13.67□□□□□ -0.22
MRPS28-206ENST00000520946 TKFCQ3LXA3 575 aa13.67□□□□□ -0.22
MRPS28-206ENST00000520946 EEPD1Q7L9B9 569 aa13.67□□□□□ -0.22
MRPS28-206ENST00000520946 SIRT2Q8IXJ6 389 aa13.67□□□□□ -0.22
MRPS28-206ENST00000520946 GMCL1P1Q8NEA9 526 aa13.67□□□□□ -0.22
MRPS28-206ENST00000520946 MKL1Q969V6 931 aa13.67□□□□□ -0.22
MRPS28-206ENST00000520946 TRERF1Q96PN7 1200 aa13.67□□□□□ -0.22
MRPS28-206ENST00000520946 ZBTB40Q9NUA8 1239 aa13.67□□□□□ -0.22
MRPS28-206ENST00000520946 SYNPO2Q9UMS6 1093 aa13.67□□□□□ -0.22
MRPS28-206ENST00000520946 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.66□□□□□ -0.22
MRPS28-206ENST00000520946 GPAA1O43292 621 aa13.66□□□□□ -0.22
MRPS28-206ENST00000520946 ADCY6O43306 1168 aa13.66□□□□□ -0.22
MRPS28-206ENST00000520946 GTPBP6O43824 516 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms