RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 MFSD4AQ8N468 514 aa8.51□□□□□ -1.05
PABPC1-216ENST00000520868 PIK3C2GO75747 1445 aa8.51□□□□□ -1.05
PABPC1-216ENST00000520868 PRR33A8MZF0 331 aa8.5□□□□□ -1.05
PABPC1-216ENST00000520868 FAM155AB1AL88 458 aaPredicted RBP8.5□□□□□ -1.05
PABPC1-216ENST00000520868 F13A1P00488 732 aa8.5□□□□□ -1.05
PABPC1-216ENST00000520868 ZNF865P0CJ78 1059 aaPredicted RBP8.5□□□□□ -1.05
PABPC1-216ENST00000520868 GLI3P10071 1580 aa8.5□□□□□ -1.05
PABPC1-216ENST00000520868 ITGB5P18084 799 aa8.5□□□□□ -1.05
PABPC1-216ENST00000520868 ETV3P41162 512 aa8.5□□□□□ -1.05
PABPC1-216ENST00000520868 BLMP54132 1417 aaPredicted RBP8.5□□□□□ -1.05
PABPC1-216ENST00000520868 NKPD1Q17RQ9 610 aa8.5□□□□□ -1.05
PABPC1-216ENST00000520868 ERMP1Q7Z2K6 904 aa8.5□□□□□ -1.05
PABPC1-216ENST00000520868 KRT27Q7Z3Y8 459 aa8.5□□□□□ -1.05
PABPC1-216ENST00000520868 RIN3Q8TB24 985 aa8.5□□□□□ -1.05
PABPC1-216ENST00000520868 XAGE3Q8WTP9 111 aa8.5□□□□□ -1.05
PABPC1-216ENST00000520868 PRDM7Q9NQW5 492 aa8.5□□□□□ -1.05
PABPC1-216ENST00000520868 MBNL3Q9NUK0 354 aaKnown RBP8.5□□□□□ -1.05
PABPC1-216ENST00000520868 TNS3Q68CZ2 1445 aa8.49□□□□□ -1.05
PABPC1-216ENST00000520868 MINDY4BA8MYZ0 360 aa8.49□□□□□ -1.05
PABPC1-216ENST00000520868 RNASE1P07998 156 aaKnown RBP8.49□□□□□ -1.05
PABPC1-216ENST00000520868 PLCG1P19174 1290 aa8.49□□□□□ -1.05
PABPC1-216ENST00000520868 KIR3DL1P43629 444 aa8.49□□□□□ -1.05
PABPC1-216ENST00000520868 GOLM1Q8NBJ4 401 aa8.49□□□□□ -1.05
PABPC1-216ENST00000520868 ACSF2Q96CM8 615 aaPredicted RBP8.49□□□□□ -1.05
PABPC1-216ENST00000520868 HIRIP3Q9BW71 556 aaPredicted RBP8.49□□□□□ -1.05
PABPC1-216ENST00000520868 KRTAP9-9Q9BYP9 154 aa8.49□□□□□ -1.05
PABPC1-216ENST00000520868 KRTAP9-4Q9BYQ2 154 aa8.49□□□□□ -1.05
PABPC1-216ENST00000520868 KBTBD4Q9NVX7 518 aa8.49□□□□□ -1.05
PABPC1-216ENST00000520868 BTG4Q9NY30 223 aa8.49□□□□□ -1.05
PABPC1-216ENST00000520868 PAPLNO95428 1278 aa8.48□□□□□ -1.05
PABPC1-216ENST00000520868 JUNBP17275 347 aaPredicted RBP8.48□□□□□ -1.05
PABPC1-216ENST00000520868 YARSP54577 528 aaKnown RBP8.48□□□□□ -1.05
PABPC1-216ENST00000520868 MFAP1P55081 439 aaKnown RBP8.48□□□□□ -1.05
PABPC1-216ENST00000520868 MPP2Q14168 576 aa8.48□□□□□ -1.05
PABPC1-216ENST00000520868 TMEM201Q5SNT2 666 aa8.48□□□□□ -1.05
PABPC1-216ENST00000520868 HS2ST1Q7LGA3 356 aa8.48□□□□□ -1.05
PABPC1-216ENST00000520868 PI4K2BQ8TCG2 481 aa8.48□□□□□ -1.05
PABPC1-216ENST00000520868 GOLGA2P5Q9HBQ8 144 aa8.48□□□□□ -1.05
PABPC1-216ENST00000520868 FMN2Q9NZ56 1722 aa8.48□□□□□ -1.05
PABPC1-216ENST00000520868 MARF1Q9Y4F3 1742 aaKnown RBP8.48□□□□□ -1.05
PABPC1-216ENST00000520868 PITPNM2Q9BZ72 1349 aa8.48□□□□□ -1.05
PABPC1-216ENST00000520868 SBNO1A3KN83 1393 aa8.48□□□□□ -1.05
PABPC1-216ENST00000520868 BIN1O00499 593 aa8.47□□□□□ -1.05
PABPC1-216ENST00000520868 ZNF16P17020 682 aaPredicted RBP8.47□□□□□ -1.05
PABPC1-216ENST00000520868 FAM160A1Q05DH4 1040 aa8.47□□□□□ -1.05
PABPC1-216ENST00000520868 IKZF1Q13422 519 aa8.47□□□□□ -1.05
PABPC1-216ENST00000520868 DPH2Q9BQC3 489 aaPredicted RBP8.47□□□□□ -1.05
PABPC1-216ENST00000520868 PRR36Q9H6K5 1346 aa8.47□□□□□ -1.05
PABPC1-216ENST00000520868 ARHGEF10O15013 1369 aa8.47□□□□□ -1.05
PABPC1-216ENST00000520868 USP32Q8NFA0 1604 aa8.47□□□□□ -1.05
PABPC1-216ENST00000520868 NRXN1Q9ULB1 1477 aa8.46□□□□□ -1.05
PABPC1-216ENST00000520868 SLC23A3Q6PIS1 610 aa8.46□□□□□ -1.06
PABPC1-216ENST00000520868 FAM196AQ6ZSG2 479 aa8.46□□□□□ -1.06
PABPC1-216ENST00000520868 LRRN4CLQ8ND94 238 aa8.46□□□□□ -1.06
PABPC1-216ENST00000520868 FAM13CQ8NE31 585 aa8.46□□□□□ -1.06
PABPC1-216ENST00000520868 NGDNQ8NEJ9 315 aaKnown RBP8.46□□□□□ -1.06
PABPC1-216ENST00000520868 ASIC4Q96FT7 647 aa8.46□□□□□ -1.06
PABPC1-216ENST00000520868 RC3H2Q9HBD1 1191 aaKnown RBP8.46□□□□□ -1.06
PABPC1-216ENST00000520868 GGT7Q9UJ14 662 aa8.46□□□□□ -1.06
PABPC1-216ENST00000520868 SUPT16HQ9Y5B9 1047 aaKnown RBP8.46□□□□□ -1.06
PABPC1-216ENST00000520868 CORINQ9Y5Q5 1042 aa8.46□□□□□ -1.06
PABPC1-216ENST00000520868 CAPN6Q9Y6Q1 641 aa8.46□□□□□ -1.06
PABPC1-216ENST00000520868 KIF1AQ12756 1690 aa8.46□□□□□ -1.06
PABPC1-216ENST00000520868 GPRASP1Q5JY77 1395 aa8.46□□□□□ -1.06
PABPC1-216ENST00000520868 KNDC1Q76NI1 1749 aa8.46□□□□□ -1.06
PABPC1-216ENST00000520868 CBX7O95931 251 aa8.45□□□□□ -1.06
PABPC1-216ENST00000520868 TXKP42681 527 aa8.45□□□□□ -1.06
PABPC1-216ENST00000520868 CWF19L2Q2TBE0 894 aaKnown RBP8.45□□□□□ -1.06
PABPC1-216ENST00000520868 REC114Q7Z4M0 266 aa8.45□□□□□ -1.06
PABPC1-216ENST00000520868 THAP5Q7Z6K1 395 aa8.45□□□□□ -1.06
PABPC1-216ENST00000520868 CDH24Q86UP0 819 aa8.45□□□□□ -1.06
PABPC1-216ENST00000520868 CYB5D2Q8WUJ1 264 aa8.45□□□□□ -1.06
PABPC1-216ENST00000520868 KCNQ5Q9NR82 932 aa8.45□□□□□ -1.06
PABPC1-216ENST00000520868 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.45□□□□□ -1.06
PABPC1-216ENST00000520868 IFT172Q9UG01 1749 aa8.45□□□□□ -1.06
PABPC1-216ENST00000520868 RGPD8O14715 1765 aaPredicted RBP8.45□□□□□ -1.06
PABPC1-216ENST00000520868 BRWD3Q6RI45 1802 aa8.45□□□□□ -1.06
PABPC1-216ENST00000520868 GARTP22102 1010 aa8.44□□□□□ -1.06
PABPC1-216ENST00000520868 EIF4A3P38919 411 aaKnown RBP8.44□□□□□ -1.06
PABPC1-216ENST00000520868 CDKAL1Q5VV42 579 aa8.44□□□□□ -1.06
PABPC1-216ENST00000520868 SLFN12Q8IYM2 578 aa8.44□□□□□ -1.06
PABPC1-216ENST00000520868 DNAJB8Q8NHS0 232 aa8.44□□□□□ -1.06
PABPC1-216ENST00000520868 PIWIL2Q8TC59 973 aaKnown RBP8.44□□□□□ -1.06
PABPC1-216ENST00000520868 HSPA12BQ96MM6 686 aa8.44□□□□□ -1.06
PABPC1-216ENST00000520868 COPRSQ9NQ92 184 aa8.44□□□□□ -1.06
PABPC1-216ENST00000520868 LMCD1Q9NZU5 365 aa8.44□□□□□ -1.06
PABPC1-216ENST00000520868 CEP131Q9UPN4 1083 aa8.44□□□□□ -1.06
PABPC1-216ENST00000520868 ANKARQ7Z5J8 1434 aa8.44□□□□□ -1.06
PABPC1-216ENST00000520868 HTR3BO95264 441 aa8.43□□□□□ -1.06
PABPC1-216ENST00000520868 ZP2Q05996 745 aa8.43□□□□□ -1.06
PABPC1-216ENST00000520868 R3HDM1Q15032 1099 aaKnown RBP8.43□□□□□ -1.06
PABPC1-216ENST00000520868 OGFOD2Q6N063 350 aa8.43□□□□□ -1.06
PABPC1-216ENST00000520868 ATG4DQ86TL0 474 aaPredicted RBP8.43□□□□□ -1.06
PABPC1-216ENST00000520868 TMEM87AQ8NBN3 555 aa8.43□□□□□ -1.06
PABPC1-216ENST00000520868 LRRC3Q9BY71 257 aa8.43□□□□□ -1.06
PABPC1-216ENST00000520868 PRDM11Q9NQV5 511 aa8.43□□□□□ -1.06
PABPC1-216ENST00000520868 SEMA3GQ9NS98 782 aa8.43□□□□□ -1.06
PABPC1-216ENST00000520868 REV1Q9UBZ9 1251 aa8.43□□□□□ -1.06
PABPC1-216ENST00000520868 ST14Q9Y5Y6 855 aa8.43□□□□□ -1.06
PABPC1-216ENST00000520868 SPATA31A5Q5VU36 1347 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms