RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 TSGA10Q9BZW7 698 aa11.21□□□□□ -0.62
PDGFRB-207ENST00000520579 UBN2Q6ZU65 1347 aa11.21□□□□□ -0.62
PDGFRB-207ENST00000520579 GOLGA6L10A6NI86 522 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 WNT7AO00755 349 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 BUB1BO60566 1050 aaPredicted RBP11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 FTCDO95954 541 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 NAT1P18440 290 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 PAFAH1B1P43034 410 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 HERVK_113P62684 666 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 SPRED3Q2MJR0 410 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 ACCSLQ4AC99 568 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 DDX42Q86XP3 938 aaKnown RBP eCLIP11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 C2CD5Q86YS7 1000 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 MB21D2Q8IYB1 491 aaPredicted RBP11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 PHC3Q8NDX5 983 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 OR8K1Q8NGG5 319 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 KCNV2Q8TDN2 545 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 CCT8L2Q96SF2 557 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 GOLPH3Q9H4A6 298 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 LMCD1Q9NZU5 365 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 EID1Q9Y6B2 187 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 ROBO2Q9HCK4 1378 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 MLH3Q9UHC1 1453 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 SMIM22K7EJ46 135 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 C21orf2O43822 256 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 PPP6R2O75170 966 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 SNCBQ16143 134 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 RTN1Q16799 776 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 FAM133BQ5BKY9 247 aaKnown RBP11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 CPLX4Q7Z7G2 160 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 HPS3Q969F9 1004 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 KRT12Q99456 494 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 L3MBTL1Q9Y468 752 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 TRIM75PA6NK02 468 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 PHF20L1A8MW92 1017 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 MSL1Q68DK7 614 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 ADAT2Q7Z6V5 191 aaKnown RBP11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 STAG1Q8WVM7 1258 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 UBLCP1Q8WVY7 318 aaPredicted RBP11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 DYDC1Q8WWB3 177 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 FBXO2Q9UK22 296 aaPredicted RBP11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 FAM184BQ9ULE4 1060 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 CAPN6Q9Y6Q1 641 aa11.2□□□□□ -0.62
PDGFRB-207ENST00000520579 PALLDQ8WX93 1383 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 PRKAB2O43741 272 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 NR1D1P20393 614 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 HLFQ16534 295 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 EARS2Q5JPH6 523 aaKnown RBP11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 C16orf87Q6PH81 154 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 MICALCLQ6ZW33 695 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 TRAPPC11Q7Z392 1133 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 SYNE4Q8N205 404 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 ZCRB1Q8TBF4 217 aaKnown RBP11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 XAGE2Q96GT9 111 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 RSRC1Q96IZ7 334 aaKnown RBP11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 IQCGQ9H095 443 aaKnown RBP11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 NAPBQ9H115 298 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 PP2D1A8MPX8 630 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 SCNN1BP51168 640 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 PAK1Q13153 545 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 GNPTABQ3T906 1256 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 LRRC23Q53EV4 343 aaPredicted RBP11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 NBPF14Q5TI25 921 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 TTLL7Q6ZT98 887 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 TBC1D1Q86TI0 1168 aaPredicted RBP11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 SELENOSQ9BQE4 189 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 KANSL2Q9H9L4 492 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 NLRC4Q9NPP4 1024 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 MCM8Q9UJA3 840 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 STK38LQ9Y2H1 464 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 HEXIM1O94992 359 aaKnown RBP11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 MCM3P25205 808 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 AMPD2Q01433 879 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 CCDC57Q2TAC2 916 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 TRIM68Q6AZZ1 485 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 NLRP14Q86W24 1093 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 METTL22Q9BUU2 404 aaPredicted RBP11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 NAA15Q9BXJ9 866 aaKnown RBP11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 ARMT1Q9H993 441 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 COPRSQ9NQ92 184 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 V9GY48 417 aaPredicted RBP11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 GRIN2DO15399 1336 aa11.19□□□□□ -0.62
PDGFRB-207ENST00000520579 NEURL4Q96JN8 1562 aa11.18□□□□□ -0.62
PDGFRB-207ENST00000520579 IFNAR2P48551 515 aa11.18□□□□□ -0.62
PDGFRB-207ENST00000520579 VAV2P52735 878 aa11.18□□□□□ -0.62
PDGFRB-207ENST00000520579 GRIK3Q13003 919 aa11.18□□□□□ -0.62
PDGFRB-207ENST00000520579 CHADLQ6NUI6 762 aa11.18□□□□□ -0.62
PDGFRB-207ENST00000520579 MDM1Q8TC05 714 aa11.18□□□□□ -0.62
PDGFRB-207ENST00000520579 RASGRP4Q8TDF6 673 aa11.18□□□□□ -0.62
PDGFRB-207ENST00000520579 EZH1Q92800 747 aaPredicted RBP11.18□□□□□ -0.62
PDGFRB-207ENST00000520579 CTAGE1Q96RT6 745 aa11.18□□□□□ -0.62
PDGFRB-207ENST00000520579 RBM12Q9NTZ6 932 aaKnown RBP11.18□□□□□ -0.62
PDGFRB-207ENST00000520579 DDX20Q9UHI6 824 aaKnown RBP11.18□□□□□ -0.62
PDGFRB-207ENST00000520579 BLOC1S6Q9UL45 172 aa11.18□□□□□ -0.62
PDGFRB-207ENST00000520579 ERICH2A1L162 156 aa11.18□□□□□ -0.62
PDGFRB-207ENST00000520579 ACTN4O43707 911 aaKnown RBP11.18□□□□□ -0.62
PDGFRB-207ENST00000520579 ZNF189O75820 626 aaPredicted RBP11.18□□□□□ -0.62
PDGFRB-207ENST00000520579 FMNL1O95466 1100 aaPredicted RBP11.18□□□□□ -0.62
PDGFRB-207ENST00000520579 PARP1P09874 1014 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms