RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 PLEKHM2Q8IWE5 1019 aa19.04■□□□□ 0.64
IGHV3-42-201ENST00000520410 TDHQ8IZJ6 230 aa19.04■□□□□ 0.64
IGHV3-42-201ENST00000520410 LRCH3Q96II8 777 aa19.04■□□□□ 0.64
IGHV3-42-201ENST00000520410 GPCPD1Q9NPB8 672 aa19.04■□□□□ 0.64
IGHV3-42-201ENST00000520410 FAM184BQ9ULE4 1060 aa19.04■□□□□ 0.64
IGHV3-42-201ENST00000520410 IGHA2P01877 340 aa19.03■□□□□ 0.64
IGHV3-42-201ENST00000520410 BMP8BP34820 402 aa19.03■□□□□ 0.64
IGHV3-42-201ENST00000520410 NOL8Q76FK4 1167 aaKnown RBP19.03■□□□□ 0.64
IGHV3-42-201ENST00000520410 DCAF4Q8WV16 495 aa19.03■□□□□ 0.64
IGHV3-42-201ENST00000520410 TRERF1Q96PN7 1200 aa19.03■□□□□ 0.64
IGHV3-42-201ENST00000520410 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.03■□□□□ 0.64
IGHV3-42-201ENST00000520410 CCPG1Q9ULG6 757 aa19.03■□□□□ 0.64
IGHV3-42-201ENST00000520410 TACC3Q9Y6A5 838 aa19.03■□□□□ 0.64
IGHV3-42-201ENST00000520410 ZNFX1Q9P2E3 1918 aaKnown RBP19.03■□□□□ 0.64
IGHV3-42-201ENST00000520410 SYNGAP1Q96PV0 1343 aa19.02■□□□□ 0.64
IGHV3-42-201ENST00000520410 HIP1O00291 1037 aa19.02■□□□□ 0.64
IGHV3-42-201ENST00000520410 SOX1O00570 391 aaPredicted RBP19.02■□□□□ 0.64
IGHV3-42-201ENST00000520410 ZNF213O14771 459 aa19.02■□□□□ 0.64
IGHV3-42-201ENST00000520410 ZNF865P0CJ78 1059 aaPredicted RBP19.02■□□□□ 0.64
IGHV3-42-201ENST00000520410 TOP1P11387 765 aaKnown RBP19.02■□□□□ 0.64
IGHV3-42-201ENST00000520410 SLC16A2P36021 539 aa19.02■□□□□ 0.64
IGHV3-42-201ENST00000520410 NSMFQ6X4W1 530 aa19.02■□□□□ 0.64
IGHV3-42-201ENST00000520410 MSL3Q8N5Y2 521 aaKnown RBP19.02■□□□□ 0.64
IGHV3-42-201ENST00000520410 RNF41Q9H4P4 317 aaPredicted RBP19.02■□□□□ 0.64
IGHV3-42-201ENST00000520410 PRR12Q9ULL5 1215 aa19.02■□□□□ 0.64
IGHV3-42-201ENST00000520410 ACVR2BQ13705 512 aa19.01■□□□□ 0.63
IGHV3-42-201ENST00000520410 AKNAD1Q5T1N1 836 aa19.01■□□□□ 0.63
IGHV3-42-201ENST00000520410 ARMCX2Q7L311 632 aa19.01■□□□□ 0.63
IGHV3-42-201ENST00000520410 VTI1AQ96AJ9 217 aa19.01■□□□□ 0.63
IGHV3-42-201ENST00000520410 TMEM47Q9BQJ4 181 aa19.01■□□□□ 0.63
IGHV3-42-201ENST00000520410 ZKSCAN3Q9BRR0 538 aa19.01■□□□□ 0.63
IGHV3-42-201ENST00000520410 SPC25Q9HBM1 224 aa19.01■□□□□ 0.63
IGHV3-42-201ENST00000520410 ZMYM6O95789 1325 aa19■□□□□ 0.63
IGHV3-42-201ENST00000520410 SYNRGQ9UMZ2 1314 aa19■□□□□ 0.63
IGHV3-42-201ENST00000520410 DNAJC25-GNG10A0A024R161 153 aa19■□□□□ 0.63
IGHV3-42-201ENST00000520410 SNAI1O95863 264 aaPredicted RBP19■□□□□ 0.63
IGHV3-42-201ENST00000520410 C6orf222P0C671 652 aaPredicted RBP19■□□□□ 0.63
IGHV3-42-201ENST00000520410 CNTN2Q02246 1040 aa19■□□□□ 0.63
IGHV3-42-201ENST00000520410 TKFCQ3LXA3 575 aa19■□□□□ 0.63
IGHV3-42-201ENST00000520410 SYDE2Q5VT97 1194 aa19■□□□□ 0.63
IGHV3-42-201ENST00000520410 TTBK2Q6IQ55 1244 aa19■□□□□ 0.63
IGHV3-42-201ENST00000520410 TICAM2Q86XR7 235 aa19■□□□□ 0.63
IGHV3-42-201ENST00000520410 TBC1D10CQ8IV04 446 aa19■□□□□ 0.63
IGHV3-42-201ENST00000520410 CCDC144CPQ8IYA2 1237 aa19■□□□□ 0.63
IGHV3-42-201ENST00000520410 ESR2Q92731 530 aa19■□□□□ 0.63
IGHV3-42-201ENST00000520410 A1CFQ9NQ94 594 aaKnown RBP19■□□□□ 0.63
IGHV3-42-201ENST00000520410 CEP290O15078 2479 aa18.99■□□□□ 0.63
IGHV3-42-201ENST00000520410 A0A1W2PQ45 241 aaPredicted RBP18.99■□□□□ 0.63
IGHV3-42-201ENST00000520410 A0A1W2PQY0 241 aa18.99■□□□□ 0.63
IGHV3-42-201ENST00000520410 PQBP1O60828 265 aaKnown RBP18.99■□□□□ 0.63
IGHV3-42-201ENST00000520410 ZNF467Q7Z7K2 595 aaPredicted RBP18.99■□□□□ 0.63
IGHV3-42-201ENST00000520410 ABHD16BQ9H3Z7 469 aa18.99■□□□□ 0.63
IGHV3-42-201ENST00000520410 STARD7Q9NQZ5 370 aa18.99■□□□□ 0.63
IGHV3-42-201ENST00000520410 PHF24Q9UPV7 400 aa18.99■□□□□ 0.63
IGHV3-42-201ENST00000520410 ZNF536O15090 1300 aa18.99■□□□□ 0.63
IGHV3-42-201ENST00000520410 NEDD4P46934 1319 aa18.99■□□□□ 0.63
IGHV3-42-201ENST00000520410 CCDC144BQ3MJ40 725 aa18.98■□□□□ 0.63
IGHV3-42-201ENST00000520410 MUM1L1Q5H9M0 696 aa18.98■□□□□ 0.63
IGHV3-42-201ENST00000520410 MAMDC4Q6UXC1 1216 aa18.98■□□□□ 0.63
IGHV3-42-201ENST00000520410 EEPD1Q7L9B9 569 aa18.98■□□□□ 0.63
IGHV3-42-201ENST00000520410 NUP133Q8WUM0 1156 aa18.98■□□□□ 0.63
IGHV3-42-201ENST00000520410 OSBPL3Q9H4L5 887 aa18.98■□□□□ 0.63
IGHV3-42-201ENST00000520410 TRIOBPQ9H2D6 2365 aa18.97■□□□□ 0.63
IGHV3-42-201ENST00000520410 PTPDC1A2A3K4 754 aa18.97■□□□□ 0.63
IGHV3-42-201ENST00000520410 ASB14A6NK59 587 aa18.97■□□□□ 0.63
IGHV3-42-201ENST00000520410 PLA2G6O60733 806 aa18.97■□□□□ 0.63
IGHV3-42-201ENST00000520410 PCP11498 1178 aaKnown RBP18.97■□□□□ 0.63
IGHV3-42-201ENST00000520410 TLE2Q04725 743 aa18.97■□□□□ 0.63
IGHV3-42-201ENST00000520410 IMMTQ16891 758 aaKnown RBP18.97■□□□□ 0.63
IGHV3-42-201ENST00000520410 IQCA1Q86XH1 822 aa18.97■□□□□ 0.63
IGHV3-42-201ENST00000520410 DHX16O60231 1041 aaKnown RBP18.96■□□□□ 0.63
IGHV3-42-201ENST00000520410 KDM4AO75164 1064 aa18.96■□□□□ 0.63
IGHV3-42-201ENST00000520410 ADAMTS4O75173 837 aa18.96■□□□□ 0.63
IGHV3-42-201ENST00000520410 ICAM1P05362 532 aa18.96■□□□□ 0.63
IGHV3-42-201ENST00000520410 FGRP09769 529 aa18.96■□□□□ 0.63
IGHV3-42-201ENST00000520410 ACLYP53396 1101 aa18.96■□□□□ 0.63
IGHV3-42-201ENST00000520410 KCNA10Q16322 511 aa18.96■□□□□ 0.63
IGHV3-42-201ENST00000520410 BADQ92934 168 aa18.96■□□□□ 0.63
IGHV3-42-201ENST00000520410 GLT1D1Q96MS3 346 aa18.96■□□□□ 0.63
IGHV3-42-201ENST00000520410 KAT14Q9H8E8 782 aa18.96■□□□□ 0.63
IGHV3-42-201ENST00000520410 PDLIM7Q9NR12 457 aa18.96■□□□□ 0.63
IGHV3-42-201ENST00000520410 TCP11L1Q9NUJ3 509 aa18.96■□□□□ 0.63
IGHV3-42-201ENST00000520410 MYADML2A6NDP7 307 aa18.95■□□□□ 0.62
IGHV3-42-201ENST00000520410 B4E1Z4 1266 aa18.95■□□□□ 0.62
IGHV3-42-201ENST00000520410 DUSP11O75319 330 aaKnown RBP18.95■□□□□ 0.62
IGHV3-42-201ENST00000520410 CLTBP09497 229 aa18.95■□□□□ 0.62
IGHV3-42-201ENST00000520410 GOLGA8HP0CJ92 632 aa18.95■□□□□ 0.62
IGHV3-42-201ENST00000520410 PDHBP11177 359 aa18.95■□□□□ 0.62
IGHV3-42-201ENST00000520410 TNFAIP2Q03169 654 aa18.95■□□□□ 0.62
IGHV3-42-201ENST00000520410 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.95■□□□□ 0.62
IGHV3-42-201ENST00000520410 FAM133AQ8N9E0 248 aa18.95■□□□□ 0.62
IGHV3-42-201ENST00000520410 FGD4Q96M96 766 aa18.95■□□□□ 0.62
IGHV3-42-201ENST00000520410 RANBP17Q9H2T7 1088 aaKnown RBP18.95■□□□□ 0.62
IGHV3-42-201ENST00000520410 CTNNA3Q9UI47 895 aa18.95■□□□□ 0.62
IGHV3-42-201ENST00000520410 DDX49Q9Y6V7 483 aaKnown RBP18.95■□□□□ 0.62
IGHV3-42-201ENST00000520410 SOWAHBA6NEL2 793 aa18.94■□□□□ 0.62
IGHV3-42-201ENST00000520410 MOXD2PA6NHM9 499 aa18.94■□□□□ 0.62
IGHV3-42-201ENST00000520410 RAG1P15918 1043 aa18.94■□□□□ 0.62
IGHV3-42-201ENST00000520410 CALML3P27482 149 aa18.94■□□□□ 0.62
IGHV3-42-201ENST00000520410 IRX5P78411 483 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms