RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 TKFCQ3LXA3 575 aa12.87□□□□□ -0.35
PVT1-208ENST00000519481 FAM109BQ6ICB4 259 aaPredicted RBP12.87□□□□□ -0.35
PVT1-208ENST00000519481 CCDC129Q6ZRS4 1044 aa12.87□□□□□ -0.35
PVT1-208ENST00000519481 TICAM2Q86XR7 235 aa12.87□□□□□ -0.35
PVT1-208ENST00000519481 PCSK9Q8NBP7 692 aaKnown RBP12.87□□□□□ -0.35
PVT1-208ENST00000519481 STARD7Q9NQZ5 370 aa12.87□□□□□ -0.35
PVT1-208ENST00000519481 HELLSQ9NRZ9 838 aa12.87□□□□□ -0.35
PVT1-208ENST00000519481 TOMM22Q9NS69 142 aa12.87□□□□□ -0.35
PVT1-208ENST00000519481 STXBP5LQ9Y2K9 1186 aa12.87□□□□□ -0.35
PVT1-208ENST00000519481 LAMA3Q16787 3333 aa12.87□□□□□ -0.35
PVT1-208ENST00000519481 DCDC2CA8MYV0 355 aa12.86□□□□□ -0.35
PVT1-208ENST00000519481 PLA2G6O60733 806 aa12.86□□□□□ -0.35
PVT1-208ENST00000519481 PQBP1O60828 265 aaKnown RBP12.86□□□□□ -0.35
PVT1-208ENST00000519481 ADAMTS4O75173 837 aa12.86□□□□□ -0.35
PVT1-208ENST00000519481 RAG1P15918 1043 aa12.86□□□□□ -0.35
PVT1-208ENST00000519481 ACLYP53396 1101 aa12.86□□□□□ -0.35
PVT1-208ENST00000519481 PDE1AP54750 535 aa12.86□□□□□ -0.35
PVT1-208ENST00000519481 HDAC1Q13547 482 aaPredicted RBP12.86□□□□□ -0.35
PVT1-208ENST00000519481 AAMPQ13685 434 aa12.86□□□□□ -0.35
PVT1-208ENST00000519481 RCSD1Q6JBY9 416 aa12.86□□□□□ -0.35
PVT1-208ENST00000519481 VTI1AQ96AJ9 217 aa12.86□□□□□ -0.35
PVT1-208ENST00000519481 LENG1Q96BZ8 264 aaPredicted RBP12.86□□□□□ -0.35
PVT1-208ENST00000519481 CHMP4CQ96CF2 233 aa12.86□□□□□ -0.35
PVT1-208ENST00000519481 GLT1D1Q96MS3 346 aa12.86□□□□□ -0.35
PVT1-208ENST00000519481 RNF146Q9NTX7 359 aa12.86□□□□□ -0.35
PVT1-208ENST00000519481 TMEM39AQ9NV64 488 aa12.86□□□□□ -0.35
PVT1-208ENST00000519481 ANAPC4Q9UJX5 808 aa12.86□□□□□ -0.35
PVT1-208ENST00000519481 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.86□□□□□ -0.35
PVT1-208ENST00000519481 SALL3Q9BXA9 1300 aa12.86□□□□□ -0.35
PVT1-208ENST00000519481 SYNRGQ9UMZ2 1314 aa12.86□□□□□ -0.35
PVT1-208ENST00000519481 TRIM43BA6NCK2 446 aa12.85□□□□□ -0.35
PVT1-208ENST00000519481 ASB14A6NK59 587 aa12.85□□□□□ -0.35
PVT1-208ENST00000519481 C6orf222P0C671 652 aaPredicted RBP12.85□□□□□ -0.35
PVT1-208ENST00000519481 ALAS1P13196 640 aa12.85□□□□□ -0.35
PVT1-208ENST00000519481 SHHQ15465 462 aa12.85□□□□□ -0.35
PVT1-208ENST00000519481 ALX1Q15699 326 aa12.85□□□□□ -0.35
PVT1-208ENST00000519481 KCNA10Q16322 511 aa12.85□□□□□ -0.35
PVT1-208ENST00000519481 CCDC96Q2M329 555 aa12.85□□□□□ -0.35
PVT1-208ENST00000519481 CCDC144BQ3MJ40 725 aa12.85□□□□□ -0.35
PVT1-208ENST00000519481 MCMDC2Q4G0Z9 681 aa12.85□□□□□ -0.35
PVT1-208ENST00000519481 ZNF697Q5TEC3 545 aa12.85□□□□□ -0.35
PVT1-208ENST00000519481 KCTD1Q719H9 257 aa12.85□□□□□ -0.35
PVT1-208ENST00000519481 ARMCX2Q7L311 632 aa12.85□□□□□ -0.35
PVT1-208ENST00000519481 SH3RF1Q7Z6J0 888 aa12.85□□□□□ -0.35
PVT1-208ENST00000519481 KLHDC9Q8NEP7 349 aa12.85□□□□□ -0.35
PVT1-208ENST00000519481 TRIM43Q96BQ3 446 aaPredicted RBP12.85□□□□□ -0.35
PVT1-208ENST00000519481 TRERF1Q96PN7 1200 aa12.85□□□□□ -0.35
PVT1-208ENST00000519481 MTMR7Q9Y216 660 aa12.85□□□□□ -0.35
PVT1-208ENST00000519481 MROH7Q68CQ1 1323 aa12.85□□□□□ -0.35
PVT1-208ENST00000519481 TRIM6-TRIM34B2RNG4 842 aa12.84□□□□□ -0.35
PVT1-208ENST00000519481 KIAA0355O15063 1070 aa12.84□□□□□ -0.35
PVT1-208ENST00000519481 ORC4O43929 436 aa12.84□□□□□ -0.35
PVT1-208ENST00000519481 CST5P28325 142 aaPredicted RBP12.84□□□□□ -0.35
PVT1-208ENST00000519481 MFAP1P55081 439 aaKnown RBP12.84□□□□□ -0.35
PVT1-208ENST00000519481 RRP12Q5JTH9 1297 aaKnown RBP12.84□□□□□ -0.35
PVT1-208ENST00000519481 CCDC174Q6PII3 467 aa12.84□□□□□ -0.35
PVT1-208ENST00000519481 NOL8Q76FK4 1167 aaKnown RBP12.84□□□□□ -0.35
PVT1-208ENST00000519481 CCDC144CPQ8IYA2 1237 aa12.84□□□□□ -0.35
PVT1-208ENST00000519481 DCAF4Q8WV16 495 aa12.84□□□□□ -0.35
PVT1-208ENST00000519481 AGBL1Q96MI9 1066 aa12.84□□□□□ -0.35
PVT1-208ENST00000519481 TOX2Q96NM4 488 aa12.84□□□□□ -0.35
PVT1-208ENST00000519481 A1CFQ9NQ94 594 aaKnown RBP12.84□□□□□ -0.35
PVT1-208ENST00000519481 ELP1O95163 1332 aa12.84□□□□□ -0.35
PVT1-208ENST00000519481 NMT2O60551 498 aa12.83□□□□□ -0.36
PVT1-208ENST00000519481 GJA9P57773 515 aa12.83□□□□□ -0.36
PVT1-208ENST00000519481 CNTN2Q02246 1040 aa12.83□□□□□ -0.36
PVT1-208ENST00000519481 TNFAIP2Q03169 654 aa12.83□□□□□ -0.36
PVT1-208ENST00000519481 FPGSQ05932 587 aa12.83□□□□□ -0.36
PVT1-208ENST00000519481 GNASQ5JWF2 1037 aa12.83□□□□□ -0.36
PVT1-208ENST00000519481 C9orf50Q5SZB4 431 aa12.83□□□□□ -0.36
PVT1-208ENST00000519481 VPS53Q5VIR6 699 aa12.83□□□□□ -0.36
PVT1-208ENST00000519481 ANKRD33Q7Z3H0 272 aa12.83□□□□□ -0.36
PVT1-208ENST00000519481 FAM133AQ8N9E0 248 aa12.83□□□□□ -0.36
PVT1-208ENST00000519481 RILPL2Q969X0 211 aa12.83□□□□□ -0.36
PVT1-208ENST00000519481 UPF3AQ9H1J1 476 aaKnown RBP12.83□□□□□ -0.36
PVT1-208ENST00000519481 RWDD1Q9H446 243 aaPredicted RBP12.83□□□□□ -0.36
PVT1-208ENST00000519481 INCENPQ9NQS7 918 aa12.83□□□□□ -0.36
PVT1-208ENST00000519481 IL17RBQ9NRM6 502 aa12.83□□□□□ -0.36
PVT1-208ENST00000519481 CCPG1Q9ULG6 757 aa12.83□□□□□ -0.36
PVT1-208ENST00000519481 PRR12Q9ULL5 1215 aa12.83□□□□□ -0.36
PVT1-208ENST00000519481 A0A0U1RQG5 324 aaPredicted RBP12.82□□□□□ -0.36
PVT1-208ENST00000519481 DLL1O00548 723 aa12.82□□□□□ -0.36
PVT1-208ENST00000519481 FOXP2O15409 715 aa12.82□□□□□ -0.36
PVT1-208ENST00000519481 TLR3O15455 904 aaKnown RBP12.82□□□□□ -0.36
PVT1-208ENST00000519481 ZEB2O60315 1214 aa12.82□□□□□ -0.36
PVT1-208ENST00000519481 FGAP02671 866 aa12.82□□□□□ -0.36
PVT1-208ENST00000519481 ASGR1P07306 291 aa12.82□□□□□ -0.36
PVT1-208ENST00000519481 TOP1P11387 765 aaKnown RBP12.82□□□□□ -0.36
PVT1-208ENST00000519481 PCP11498 1178 aaKnown RBP12.82□□□□□ -0.36
PVT1-208ENST00000519481 SMAD3P84022 425 aaKnown RBP12.82□□□□□ -0.36
PVT1-208ENST00000519481 NSMFQ6X4W1 530 aa12.82□□□□□ -0.36
PVT1-208ENST00000519481 RNPC3Q96LT9 517 aaKnown RBP12.82□□□□□ -0.36
PVT1-208ENST00000519481 FAM227BQ96M60 508 aa12.82□□□□□ -0.36
PVT1-208ENST00000519481 FGD4Q96M96 766 aa12.82□□□□□ -0.36
PVT1-208ENST00000519481 FAM161BQ96MY7 647 aa12.82□□□□□ -0.36
PVT1-208ENST00000519481 LNPKQ9C0E8 428 aa12.82□□□□□ -0.36
PVT1-208ENST00000519481 AP5M1Q9H0R1 490 aa12.82□□□□□ -0.36
PVT1-208ENST00000519481 PNMA2Q9UL42 364 aa12.82□□□□□ -0.36
PVT1-208ENST00000519481 LTBP2Q14767 1821 aa12.82□□□□□ -0.36
PVT1-208ENST00000519481 ZNF536O15090 1300 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms