RNA–Protein interactions for RNA: ENST00000519363.1

PABPC1-210, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-210ENST00000519363 TRAPPC10P48553 1259 aa17.14■□□□□ 0.33
PABPC1-210ENST00000519363 PRKG1Q13976 671 aa17.14■□□□□ 0.33
PABPC1-210ENST00000519363 SH3D19Q5HYK7 790 aa17.14■□□□□ 0.33
PABPC1-210ENST00000519363 ARMC9Q7Z3E5 817 aa17.14■□□□□ 0.33
PABPC1-210ENST00000519363 AMNQ9BXJ7 453 aa17.14■□□□□ 0.33
PABPC1-210ENST00000519363 MORC2Q9Y6X9 1032 aaPredicted RBP17.14■□□□□ 0.33
PABPC1-210ENST00000519363 A0A0G2JMZ2 1700 aa17.13■□□□□ 0.33
PABPC1-210ENST00000519363 SPDYE5A6NIY4 337 aa17.13■□□□□ 0.33
PABPC1-210ENST00000519363 ADCY7P51828 1080 aa17.13■□□□□ 0.33
PABPC1-210ENST00000519363 UBE2HP62256 183 aa17.13■□□□□ 0.33
PABPC1-210ENST00000519363 FKBP1BP68106 108 aa17.13■□□□□ 0.33
PABPC1-210ENST00000519363 PPATQ06203 517 aa17.13■□□□□ 0.33
PABPC1-210ENST00000519363 KLHL40Q2TBA0 621 aa17.13■□□□□ 0.33
PABPC1-210ENST00000519363 ANO1Q5XXA6 986 aa17.13■□□□□ 0.33
PABPC1-210ENST00000519363 MAP1SQ66K74 1059 aaPredicted RBP17.13■□□□□ 0.33
PABPC1-210ENST00000519363 SLF1Q9BQI6 1058 aa17.13■□□□□ 0.33
PABPC1-210ENST00000519363 RIC8AQ9NPQ8 531 aa17.13■□□□□ 0.33
PABPC1-210ENST00000519363 TFIP11Q9UBB9 837 aaKnown RBP17.13■□□□□ 0.33
PABPC1-210ENST00000519363 NOL7Q9UMY1 257 aaKnown RBP17.13■□□□□ 0.33
PABPC1-210ENST00000519363 SMCO2A6NFE2 343 aa17.12■□□□□ 0.33
PABPC1-210ENST00000519363 TRIM75PA6NK02 468 aa17.12■□□□□ 0.33
PABPC1-210ENST00000519363 TRAK2O60296 914 aa17.12■□□□□ 0.33
PABPC1-210ENST00000519363 FDX1P10109 184 aa17.12■□□□□ 0.33
PABPC1-210ENST00000519363 LDLRAD1Q5T700 205 aa17.12■□□□□ 0.33
PABPC1-210ENST00000519363 KRT25Q7Z3Z0 450 aa17.12■□□□□ 0.33
PABPC1-210ENST00000519363 FBXO11Q86XK2 927 aa17.12■□□□□ 0.33
PABPC1-210ENST00000519363 ERO1BQ86YB8 467 aa17.12■□□□□ 0.33
PABPC1-210ENST00000519363 REXO1Q8N1G1 1221 aaKnown RBP17.12■□□□□ 0.33
PABPC1-210ENST00000519363 LINC00301Q8NCQ3 95 aa17.12■□□□□ 0.33
PABPC1-210ENST00000519363 KCNG4Q8TDN1 519 aa17.12■□□□□ 0.33
PABPC1-210ENST00000519363 COA7Q96BR5 231 aa17.12■□□□□ 0.33
PABPC1-210ENST00000519363 FTOQ9C0B1 505 aaKnown RBP eCLIP17.12■□□□□ 0.33
PABPC1-210ENST00000519363 COL11A1P12107 1806 aaPredicted RBP17.12■□□□□ 0.33
PABPC1-210ENST00000519363 SMCHD1A6NHR9 2005 aa17.11■□□□□ 0.33
PABPC1-210ENST00000519363 BMP15O95972 392 aa17.11■□□□□ 0.33
PABPC1-210ENST00000519363 TOB1P50616 345 aaPredicted RBP17.11■□□□□ 0.33
PABPC1-210ENST00000519363 HMGCS2P54868 508 aa17.11■□□□□ 0.33
PABPC1-210ENST00000519363 PPIL2Q13356 520 aa17.11■□□□□ 0.33
PABPC1-210ENST00000519363 TTLL12Q14166 644 aaPredicted RBP17.11■□□□□ 0.33
PABPC1-210ENST00000519363 PRPF38AQ8NAV1 312 aaKnown RBP17.11■□□□□ 0.33
PABPC1-210ENST00000519363 CUL5Q93034 780 aa17.11■□□□□ 0.33
PABPC1-210ENST00000519363 RPAP3Q9H6T3 665 aaPredicted RBP17.11■□□□□ 0.33
PABPC1-210ENST00000519363 NMRK2Q9NPI5 230 aa17.11■□□□□ 0.33
PABPC1-210ENST00000519363 TMOD4Q9NZQ9 345 aa17.11■□□□□ 0.33
PABPC1-210ENST00000519363 PNMA2Q9UL42 364 aa17.11■□□□□ 0.33
PABPC1-210ENST00000519363 PPP1R9AQ9ULJ8 1098 aa17.11■□□□□ 0.33
PABPC1-210ENST00000519363 PCDHA6Q9UN73 950 aa17.11■□□□□ 0.33
PABPC1-210ENST00000519363 PCDHA8Q9Y5H6 950 aa17.11■□□□□ 0.33
PABPC1-210ENST00000519363 PCDHA1Q9Y5I3 950 aa17.11■□□□□ 0.33
PABPC1-210ENST00000519363 MYPNQ86TC9 1320 aa17.11■□□□□ 0.33
PABPC1-210ENST00000519363 CCDC194A0A1B0GVG4 234 aa17.1■□□□□ 0.33
PABPC1-210ENST00000519363 SLC39A14Q15043 492 aa17.1■□□□□ 0.33
PABPC1-210ENST00000519363 STK38Q15208 465 aa17.1■□□□□ 0.33
PABPC1-210ENST00000519363 PTPAQ15257 358 aa17.1■□□□□ 0.33
PABPC1-210ENST00000519363 EARS2Q5JPH6 523 aaKnown RBP17.1■□□□□ 0.33
PABPC1-210ENST00000519363 KIFC2Q96AC6 838 aa17.1■□□□□ 0.33
PABPC1-210ENST00000519363 TANGO6Q9C0B7 1094 aa17.1■□□□□ 0.33
PABPC1-210ENST00000519363 FBXO28Q9NVF7 368 aa17.1■□□□□ 0.33
PABPC1-210ENST00000519363 CEP131Q9UPN4 1083 aa17.1■□□□□ 0.33
PABPC1-210ENST00000519363 KCNH4Q9UQ05 1017 aa17.1■□□□□ 0.33
PABPC1-210ENST00000519363 CLIC4Q9Y696 253 aa17.1■□□□□ 0.33
PABPC1-210ENST00000519363 DDX49Q9Y6V7 483 aaKnown RBP17.1■□□□□ 0.33
PABPC1-210ENST00000519363 MYH7BA7E2Y1 1941 aa17.09■□□□□ 0.33
PABPC1-210ENST00000519363 A0A0G2JLL6 359 aaPredicted RBP17.09■□□□□ 0.33
PABPC1-210ENST00000519363 FAM205CA6NFA0 338 aa17.09■□□□□ 0.33
PABPC1-210ENST00000519363 TRAF5O00463 557 aa17.09■□□□□ 0.33
PABPC1-210ENST00000519363 CXCL11O14625 94 aa17.09■□□□□ 0.33
PABPC1-210ENST00000519363 ADAMTS3O15072 1205 aa17.09■□□□□ 0.33
PABPC1-210ENST00000519363 PPP6R2O75170 966 aa17.09■□□□□ 0.33
PABPC1-210ENST00000519363 GADD45BO75293 160 aaPredicted RBP17.09■□□□□ 0.33
PABPC1-210ENST00000519363 CLK2P49760 499 aaKnown RBP17.09■□□□□ 0.33
PABPC1-210ENST00000519363 MRPL12P52815 198 aaKnown RBP17.09■□□□□ 0.33
PABPC1-210ENST00000519363 DGKZQ13574 1117 aa17.09■□□□□ 0.33
PABPC1-210ENST00000519363 SF3A1Q15459 793 aaKnown RBP17.09■□□□□ 0.33
PABPC1-210ENST00000519363 MCTP2Q6DN12 878 aa17.09■□□□□ 0.33
PABPC1-210ENST00000519363 PIK3AP1Q6ZUJ8 805 aa17.09■□□□□ 0.33
PABPC1-210ENST00000519363 PRRT2Q7Z6L0 340 aaPredicted RBP17.09■□□□□ 0.33
PABPC1-210ENST00000519363 JMYQ8N9B5 988 aa17.09■□□□□ 0.33
PABPC1-210ENST00000519363 PROCA1Q8NCQ7 364 aaPredicted RBP17.09■□□□□ 0.33
PABPC1-210ENST00000519363 GPT2Q8TD30 523 aa17.09■□□□□ 0.33
PABPC1-210ENST00000519363 CLMNQ96JQ2 1002 aa17.09■□□□□ 0.33
PABPC1-210ENST00000519363 ELP3Q9H9T3 547 aa17.09■□□□□ 0.33
PABPC1-210ENST00000519363 ABCB11O95342 1321 aa17.08■□□□□ 0.32
PABPC1-210ENST00000519363 SPTLC2O15270 562 aa17.08■□□□□ 0.32
PABPC1-210ENST00000519363 FLOT1O75955 427 aa17.08■□□□□ 0.32
PABPC1-210ENST00000519363 ICAM1P05362 532 aa17.08■□□□□ 0.32
PABPC1-210ENST00000519363 CEBPZQ03701 1054 aaKnown RBP17.08■□□□□ 0.32
PABPC1-210ENST00000519363 ORC2Q13416 577 aaPredicted RBP17.08■□□□□ 0.32
PABPC1-210ENST00000519363 NOM1Q5C9Z4 860 aaKnown RBP17.08■□□□□ 0.32
PABPC1-210ENST00000519363 MOB2Q70IA6 237 aa17.08■□□□□ 0.32
PABPC1-210ENST00000519363 RASGRP4Q8TDF6 673 aa17.08■□□□□ 0.32
PABPC1-210ENST00000519363 PSTPIP2Q9H939 334 aa17.08■□□□□ 0.32
PABPC1-210ENST00000519363 SLC38A10Q9HBR0 1119 aa17.08■□□□□ 0.32
PABPC1-210ENST00000519363 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.08■□□□□ 0.32
PABPC1-210ENST00000519363 USP17L15C9J2P7 530 aa17.07■□□□□ 0.32
PABPC1-210ENST00000519363 USP17L13C9JLJ4 530 aa17.07■□□□□ 0.32
PABPC1-210ENST00000519363 USP17L11C9JVI0 530 aa17.07■□□□□ 0.32
PABPC1-210ENST00000519363 USP17L18D6R9N7 530 aa17.07■□□□□ 0.32
PABPC1-210ENST00000519363 USP17L22D6RA61 530 aa17.07■□□□□ 0.32
PABPC1-210ENST00000519363 USP17L17D6RBQ6 530 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms