RNA–Protein interactions for RNA: ENST00000518872.1

SYNPO-203, Transcript of synaptopodin, humanhuman

TSL 5

Gene SYNPO, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-203ENST00000518872 PDHBP11177 359 aa34.93■■■■□ 3.18
SYNPO-203ENST00000518872 ANKRD35Q8N283 1001 aa34.93■■■■□ 3.18
SYNPO-203ENST00000518872 ARRDC4Q8NCT1 418 aa34.93■■■■□ 3.18
SYNPO-203ENST00000518872 SLC4A3P48751 1232 aa34.92■■■■□ 3.18
SYNPO-203ENST00000518872 IQCA1Q86XH1 822 aa34.92■■■■□ 3.18
SYNPO-203ENST00000518872 ANKS1AQ92625 1134 aa34.92■■■■□ 3.18
SYNPO-203ENST00000518872 AGBL1Q96MI9 1066 aa34.92■■■■□ 3.18
SYNPO-203ENST00000518872 RANBP17Q9H2T7 1088 aaKnown RBP34.92■■■■□ 3.18
SYNPO-203ENST00000518872 CHMP4CQ96CF2 233 aa34.91■■■■□ 3.18
SYNPO-203ENST00000518872 PRO3102Q9H379 93 aa34.91■■■■□ 3.18
SYNPO-203ENST00000518872 CNNM2Q9H8M5 875 aa34.91■■■■□ 3.18
SYNPO-203ENST00000518872 RNF146Q9NTX7 359 aa34.91■■■■□ 3.18
SYNPO-203ENST00000518872 MTMR7Q9Y216 660 aa34.91■■■■□ 3.18
SYNPO-203ENST00000518872 KDM4AO75164 1064 aa34.9■■■■□ 3.18
SYNPO-203ENST00000518872 ZNF865P0CJ78 1059 aaPredicted RBP34.9■■■■□ 3.18
SYNPO-203ENST00000518872 FGD4Q96M96 766 aa34.9■■■■□ 3.18
SYNPO-203ENST00000518872 KRT23Q9C075 422 aa34.9■■■■□ 3.18
SYNPO-203ENST00000518872 CNPY2Q9Y2B0 182 aa34.9■■■■□ 3.18
SYNPO-203ENST00000518872 ICAM1P05362 532 aa34.89■■■■□ 3.18
SYNPO-203ENST00000518872 ZNF543Q08ER8 600 aa34.89■■■■□ 3.18
SYNPO-203ENST00000518872 SYDE2Q5VT97 1194 aa34.89■■■■□ 3.18
SYNPO-203ENST00000518872 TTBK2Q6IQ55 1244 aa34.89■■■■□ 3.18
SYNPO-203ENST00000518872 B4E1Z4 1266 aa34.88■■■■□ 3.17
SYNPO-203ENST00000518872 CHRDL2Q6WN34 429 aa34.88■■■■□ 3.17
SYNPO-203ENST00000518872 FAM133AQ8N9E0 248 aa34.88■■■■□ 3.17
SYNPO-203ENST00000518872 TRERF1Q96PN7 1200 aa34.88■■■■□ 3.17
SYNPO-203ENST00000518872 A1CFQ9NQ94 594 aaKnown RBP34.88■■■■□ 3.17
SYNPO-203ENST00000518872 HOMER2Q9NSB8 354 aa34.88■■■■□ 3.17
SYNPO-203ENST00000518872 RANBP2P49792 3224 aaKnown RBP34.88■■■■□ 3.17
SYNPO-203ENST00000518872 SNAI1O95863 264 aaPredicted RBP34.87■■■■□ 3.17
SYNPO-203ENST00000518872 AKR1A1P14550 325 aa34.87■■■■□ 3.17
SYNPO-203ENST00000518872 TAL1P17542 331 aaPredicted RBP34.87■■■■□ 3.17
SYNPO-203ENST00000518872 C7orf61Q8IZ16 206 aa34.87■■■■□ 3.17
SYNPO-203ENST00000518872 ZKSCAN3Q9BRR0 538 aa34.87■■■■□ 3.17
SYNPO-203ENST00000518872 ZSWIM5Q9P217 1185 aa34.87■■■■□ 3.17
SYNPO-203ENST00000518872 PNMA2Q9UL42 364 aa34.87■■■■□ 3.17
SYNPO-203ENST00000518872 SGSM2O43147 1006 aa34.86■■■■□ 3.17
SYNPO-203ENST00000518872 RARBP10826 455 aa34.86■■■■□ 3.17
SYNPO-203ENST00000518872 ALAS1P13196 640 aa34.86■■■■□ 3.17
SYNPO-203ENST00000518872 GPATCH4Q5T3I0 446 aaKnown RBP34.86■■■■□ 3.17
SYNPO-203ENST00000518872 ANO1Q5XXA6 986 aa34.86■■■■□ 3.17
SYNPO-203ENST00000518872 CCDC174Q6PII3 467 aa34.86■■■■□ 3.17
SYNPO-203ENST00000518872 ZSCAN10Q96SZ4 725 aaPredicted RBP34.86■■■■□ 3.17
SYNPO-203ENST00000518872 FRMPD2Q68DX3 1309 aaPredicted RBP34.85■■■■□ 3.17
SYNPO-203ENST00000518872 SLC16A2P36021 539 aa34.85■■■■□ 3.17
SYNPO-203ENST00000518872 LRRC26Q2I0M4 334 aa34.85■■■■□ 3.17
SYNPO-203ENST00000518872 SENP6Q9GZR1 1112 aaPredicted RBP34.85■■■■□ 3.17
SYNPO-203ENST00000518872 CCPG1Q9ULG6 757 aa34.85■■■■□ 3.17
SYNPO-203ENST00000518872 KBTBD13C9JR72 458 aa34.84■■■■□ 3.17
SYNPO-203ENST00000518872 PNMA1Q8ND90 353 aa34.84■■■■□ 3.17
SYNPO-203ENST00000518872 ABHD16BQ9H3Z7 469 aa34.84■■■■□ 3.17
SYNPO-203ENST00000518872 GPCPD1Q9NPB8 672 aa34.84■■■■□ 3.17
SYNPO-203ENST00000518872 LCTP09848 1927 aa34.84■■■■□ 3.17
SYNPO-203ENST00000518872 POTEB2H3BUK9 544 aa34.83■■■■□ 3.17
SYNPO-203ENST00000518872 SNAP25P60880 206 aa34.83■■■■□ 3.17
SYNPO-203ENST00000518872 LRRC41Q15345 812 aa34.83■■■■□ 3.17
SYNPO-203ENST00000518872 GJC2Q5T442 439 aaPredicted RBP34.83■■■■□ 3.17
SYNPO-203ENST00000518872 ENAHQ8N8S7 591 aaPredicted RBP34.83■■■■□ 3.17
SYNPO-203ENST00000518872 CDKN2AIPQ9NXV6 580 aaPredicted RBP34.83■■■■□ 3.17
SYNPO-203ENST00000518872 DNAH12Q6ZR08 3092 aa34.83■■■■□ 3.17
SYNPO-203ENST00000518872 CENPQQ7L2Z9 268 aaPredicted RBP34.82■■■■□ 3.16
SYNPO-203ENST00000518872 XPNPEP3Q9NQH7 507 aa34.82■■■■□ 3.16
SYNPO-203ENST00000518872 RBM27Q9P2N5 1060 aaKnown RBP34.82■■■■□ 3.16
SYNPO-203ENST00000518872 U3KPZ7 1027 aaPredicted RBP34.82■■■■□ 3.16
SYNPO-203ENST00000518872 TNKSO95271 1327 aa34.81■■■■□ 3.16
SYNPO-203ENST00000518872 WDR19Q8NEZ3 1342 aa34.81■■■■□ 3.16
SYNPO-203ENST00000518872 PTH1RQ03431 593 aa34.81■■■■□ 3.16
SYNPO-203ENST00000518872 MUM1L1Q5H9M0 696 aa34.81■■■■□ 3.16
SYNPO-203ENST00000518872 ARMCX2Q7L311 632 aa34.81■■■■□ 3.16
SYNPO-203ENST00000518872 KAT14Q9H8E8 782 aa34.81■■■■□ 3.16
SYNPO-203ENST00000518872 FAM184BQ9ULE4 1060 aa34.81■■■■□ 3.16
SYNPO-203ENST00000518872 A0A1W2PPC1 479 aa34.8■■■■□ 3.16
SYNPO-203ENST00000518872 CYP21A2P08686 494 aa34.8■■■■□ 3.16
SYNPO-203ENST00000518872 CNTN2Q02246 1040 aa34.8■■■■□ 3.16
SYNPO-203ENST00000518872 ACVR2BQ13705 512 aa34.8■■■■□ 3.16
SYNPO-203ENST00000518872 CYP39A1Q9NYL5 469 aa34.8■■■■□ 3.16
SYNPO-203ENST00000518872 RNF180Q86T96 592 aa34.79■■■■□ 3.16
SYNPO-203ENST00000518872 CCDC144CPQ8IYA2 1237 aa34.79■■■■□ 3.16
SYNPO-203ENST00000518872 GDF15Q99988 308 aa34.79■■■■□ 3.16
SYNPO-203ENST00000518872 UBAC1Q9BSL1 405 aa34.79■■■■□ 3.16
SYNPO-203ENST00000518872 KATNBL1Q9H079 304 aa34.79■■■■□ 3.16
SYNPO-203ENST00000518872 PHF24Q9UPV7 400 aa34.79■■■■□ 3.16
SYNPO-203ENST00000518872 LRRC37A2A6NM11 1700 aa34.78■■■■□ 3.16
SYNPO-203ENST00000518872 SOWAHBA6NEL2 793 aa34.78■■■■□ 3.16
SYNPO-203ENST00000518872 ASB14A6NK59 587 aa34.78■■■■□ 3.16
SYNPO-203ENST00000518872 ADAMTS4O75173 837 aa34.78■■■■□ 3.16
SYNPO-203ENST00000518872 SNX17Q15036 470 aa34.78■■■■□ 3.16
SYNPO-203ENST00000518872 ZHX1Q9UKY1 873 aaPredicted RBP34.78■■■■□ 3.16
SYNPO-203ENST00000518872 ZMYND8Q9ULU4 1186 aaPredicted RBP34.78■■■■□ 3.16
SYNPO-203ENST00000518872 BMP8BP34820 402 aa34.77■■■■□ 3.16
SYNPO-203ENST00000518872 FXR1P51114 621 aaKnown RBP eCLIP34.77■■■■□ 3.16
SYNPO-203ENST00000518872 ASPRV1Q53RT3 343 aa34.77■■■■□ 3.16
SYNPO-203ENST00000518872 C1orf53Q5VUE5 145 aa34.77■■■■□ 3.16
SYNPO-203ENST00000518872 MAP4K1Q92918 833 aa34.77■■■■□ 3.16
SYNPO-203ENST00000518872 DUSP11O75319 330 aaKnown RBP34.76■■■■□ 3.16
SYNPO-203ENST00000518872 TRDNQ13061 729 aa34.76■■■■□ 3.16
SYNPO-203ENST00000518872 SEC23AQ15436 765 aa34.76■■■■□ 3.16
SYNPO-203ENST00000518872 MYH6P13533 1939 aa34.76■■■■□ 3.15
SYNPO-203ENST00000518872 LOC102724159A0A0B4J2E5 919 aa34.75■■■■□ 3.15
SYNPO-203ENST00000518872 PGK1P00558 417 aa34.75■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms