RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 FAM86C2PA6NEL3 165 aa10.7□□□□□ -0.7
PVT1-207ENST00000518528 PI4K2BG5E9Z4 385 aa10.7□□□□□ -0.7
PVT1-207ENST00000518528 ATP2A1O14983 1001 aa10.7□□□□□ -0.7
PVT1-207ENST00000518528 CA3P07451 260 aa10.7□□□□□ -0.7
PVT1-207ENST00000518528 TRIM27P14373 513 aa10.7□□□□□ -0.7
PVT1-207ENST00000518528 BEX3Q00994 111 aa10.7□□□□□ -0.7
PVT1-207ENST00000518528 CSPP1Q1MSJ5 1256 aa10.7□□□□□ -0.7
PVT1-207ENST00000518528 AACSQ86V21 672 aa10.7□□□□□ -0.7
PVT1-207ENST00000518528 ARNTL2Q8WYA1 636 aa10.7□□□□□ -0.7
PVT1-207ENST00000518528 FRAT1Q92837 279 aaPredicted RBP10.7□□□□□ -0.7
PVT1-207ENST00000518528 SLC9A7Q96T83 725 aa10.7□□□□□ -0.7
PVT1-207ENST00000518528 TRPV6Q9H1D0 765 aa10.7□□□□□ -0.7
PVT1-207ENST00000518528 SMCHD1A6NHR9 2005 aa10.69□□□□□ -0.7
PVT1-207ENST00000518528 UMODL1Q5DID0 1318 aa10.69□□□□□ -0.7
PVT1-207ENST00000518528 ZNF316A6NFI3 1004 aaPredicted RBP10.69□□□□□ -0.7
PVT1-207ENST00000518528 ASB14A6NK59 587 aa10.69□□□□□ -0.7
PVT1-207ENST00000518528 PRR33A8MZF0 331 aa10.69□□□□□ -0.7
PVT1-207ENST00000518528 RFC2P35250 354 aa10.69□□□□□ -0.7
PVT1-207ENST00000518528 IRX5P78411 483 aaPredicted RBP10.69□□□□□ -0.7
PVT1-207ENST00000518528 C12orf60Q5U649 245 aa10.69□□□□□ -0.7
PVT1-207ENST00000518528 C16orf86Q6ZW13 317 aa10.69□□□□□ -0.7
PVT1-207ENST00000518528 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.69□□□□□ -0.7
PVT1-207ENST00000518528 TLK2Q86UE8 772 aa10.69□□□□□ -0.7
PVT1-207ENST00000518528 CCDC144CPQ8IYA2 1237 aa10.69□□□□□ -0.7
PVT1-207ENST00000518528 LCORLQ8N3X6 602 aa10.69□□□□□ -0.7
PVT1-207ENST00000518528 UIMC1Q96RL1 719 aa10.69□□□□□ -0.7
PVT1-207ENST00000518528 CERS4Q9HA82 394 aa10.69□□□□□ -0.7
PVT1-207ENST00000518528 USP17L12C9JPN9 530 aa10.68□□□□□ -0.7
PVT1-207ENST00000518528 USP17L21D6R901 530 aa10.68□□□□□ -0.7
PVT1-207ENST00000518528 RFXAPO00287 272 aa10.68□□□□□ -0.7
PVT1-207ENST00000518528 CTAGE5O15320 804 aa10.68□□□□□ -0.7
PVT1-207ENST00000518528 DYNC1LI2O43237 492 aaPredicted RBP10.68□□□□□ -0.7
PVT1-207ENST00000518528 ADCY6O43306 1168 aa10.68□□□□□ -0.7
PVT1-207ENST00000518528 B4GALT4O60513 344 aa10.68□□□□□ -0.7
PVT1-207ENST00000518528 FDX1P10109 184 aa10.68□□□□□ -0.7
PVT1-207ENST00000518528 ALADP13716 330 aa10.68□□□□□ -0.7
PVT1-207ENST00000518528 MRE11P49959 708 aa10.68□□□□□ -0.7
PVT1-207ENST00000518528 OAZ1P54368 228 aa10.68□□□□□ -0.7
PVT1-207ENST00000518528 EVX2Q03828 476 aa10.68□□□□□ -0.7
PVT1-207ENST00000518528 TTLL4Q14679 1199 aa10.68□□□□□ -0.7
PVT1-207ENST00000518528 HSP90AB4PQ58FF6 505 aa10.68□□□□□ -0.7
PVT1-207ENST00000518528 DEFB128Q7Z7B8 93 aa10.68□□□□□ -0.7
PVT1-207ENST00000518528 RETREG2Q8NC44 543 aa10.68□□□□□ -0.7
PVT1-207ENST00000518528 KIFC2Q96AC6 838 aa10.68□□□□□ -0.7
PVT1-207ENST00000518528 CLUAP1Q96AJ1 413 aa10.68□□□□□ -0.7
PVT1-207ENST00000518528 SCLYQ96I15 445 aa10.68□□□□□ -0.7
PVT1-207ENST00000518528 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.68□□□□□ -0.7
PVT1-207ENST00000518528 WNT8AQ9H1J5 351 aa10.68□□□□□ -0.7
PVT1-207ENST00000518528 ALDH8A1Q9H2A2 487 aaPredicted RBP10.68□□□□□ -0.7
PVT1-207ENST00000518528 ARMT1Q9H993 441 aa10.68□□□□□ -0.7
PVT1-207ENST00000518528 LMCD1Q9NZU5 365 aa10.68□□□□□ -0.7
PVT1-207ENST00000518528 Q9Y3F1 56 aa10.68□□□□□ -0.7
PVT1-207ENST00000518528 RIPK3Q9Y572 518 aa10.68□□□□□ -0.7
PVT1-207ENST00000518528 A0A0G2JMZ2 1700 aa10.67□□□□□ -0.7
PVT1-207ENST00000518528 CHD9Q3L8U1 2897 aa10.67□□□□□ -0.7
PVT1-207ENST00000518528 F5H6K3 240 aa10.67□□□□□ -0.7
PVT1-207ENST00000518528 GOLIM4O00461 696 aa10.67□□□□□ -0.7
PVT1-207ENST00000518528 MBD4O95243 580 aa10.67□□□□□ -0.7
PVT1-207ENST00000518528 SSTR3P32745 418 aaPredicted RBP10.67□□□□□ -0.7
PVT1-207ENST00000518528 TAP1Q03518 808 aa10.67□□□□□ -0.7
PVT1-207ENST00000518528 KLRC3Q07444 240 aa10.67□□□□□ -0.7
PVT1-207ENST00000518528 BRDTQ58F21 947 aaPredicted RBP10.67□□□□□ -0.7
PVT1-207ENST00000518528 IQSEC1Q6DN90 963 aa10.67□□□□□ -0.7
PVT1-207ENST00000518528 GJD3Q8N144 294 aa10.67□□□□□ -0.7
PVT1-207ENST00000518528 AGBL1Q96MI9 1066 aa10.67□□□□□ -0.7
PVT1-207ENST00000518528 DNAJC2Q99543 621 aaKnown RBP10.67□□□□□ -0.7
PVT1-207ENST00000518528 NUP88Q99567 741 aaPredicted RBP10.67□□□□□ -0.7
PVT1-207ENST00000518528 FTOQ9C0B1 505 aaKnown RBP eCLIP10.67□□□□□ -0.7
PVT1-207ENST00000518528 KCNH6Q9H252 994 aa10.67□□□□□ -0.7
PVT1-207ENST00000518528 ACAD9Q9H845 621 aa10.67□□□□□ -0.7
PVT1-207ENST00000518528 MKNK2Q9HBH9 465 aa10.67□□□□□ -0.7
PVT1-207ENST00000518528 SLC38A10Q9HBR0 1119 aa10.67□□□□□ -0.7
PVT1-207ENST00000518528 RAVER2Q9HCJ3 691 aaKnown RBP10.67□□□□□ -0.7
PVT1-207ENST00000518528 C11orf16Q9NQ32 467 aa10.67□□□□□ -0.7
PVT1-207ENST00000518528 GPHNQ9NQX3 736 aaPredicted RBP10.67□□□□□ -0.7
PVT1-207ENST00000518528 POLR3EQ9NVU0 708 aa10.67□□□□□ -0.7
PVT1-207ENST00000518528 NYAP2Q9P242 653 aa10.67□□□□□ -0.7
PVT1-207ENST00000518528 FEM1BQ9UK73 627 aa10.67□□□□□ -0.7
PVT1-207ENST00000518528 COG6Q9Y2V7 657 aa10.67□□□□□ -0.7
PVT1-207ENST00000518528 PRRC2BQ5JSZ5 2229 aaKnown RBP10.67□□□□□ -0.7
PVT1-207ENST00000518528 MYH1P12882 1939 aa10.66□□□□□ -0.7
PVT1-207ENST00000518528 PLXNA1Q9UIW2 1896 aa10.66□□□□□ -0.7
PVT1-207ENST00000518528 FOCADQ5VW36 1801 aa10.66□□□□□ -0.7
PVT1-207ENST00000518528 TCRBV5S4A2TA0A5A2 114 aa10.66□□□□□ -0.7
PVT1-207ENST00000518528 PRKAB2O43741 272 aa10.66□□□□□ -0.7
PVT1-207ENST00000518528 NDUFB10O96000 172 aa10.66□□□□□ -0.7
PVT1-207ENST00000518528 KCNJ6P48051 423 aa10.66□□□□□ -0.7
PVT1-207ENST00000518528 GRB10Q13322 594 aa10.66□□□□□ -0.7
PVT1-207ENST00000518528 KRT40Q6A162 431 aa10.66□□□□□ -0.7
PVT1-207ENST00000518528 HERC6Q8IVU3 1022 aa10.66□□□□□ -0.7
PVT1-207ENST00000518528 TMEM57Q8N5G2 664 aa10.66□□□□□ -0.7
PVT1-207ENST00000518528 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.66□□□□□ -0.7
PVT1-207ENST00000518528 ZNF287Q9HBT7 754 aa10.66□□□□□ -0.7
PVT1-207ENST00000518528 HOMER2Q9NSB8 354 aa10.66□□□□□ -0.7
PVT1-207ENST00000518528 ISY1Q9ULR0 285 aaKnown RBP10.66□□□□□ -0.7
PVT1-207ENST00000518528 GNEQ9Y223 722 aaKnown RBP10.66□□□□□ -0.7
PVT1-207ENST00000518528 GRIN2DO15399 1336 aa10.65□□□□□ -0.7
PVT1-207ENST00000518528 TNKSO95271 1327 aa10.65□□□□□ -0.7
PVT1-207ENST00000518528 CYP2D7A0A087X1C5 515 aa10.65□□□□□ -0.7
PVT1-207ENST00000518528 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms