RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 SYNGAP1Q96PV0 1343 aa8.75□□□□□ -1.01
TNFRSF11B-202ENST00000517352 TSPY2A6NKD2 308 aa8.74□□□□□ -1.01
TNFRSF11B-202ENST00000517352 PATL2C9JE40 543 aaKnown RBP8.74□□□□□ -1.01
TNFRSF11B-202ENST00000517352 TMEM232C9JQI7 657 aa8.74□□□□□ -1.01
TNFRSF11B-202ENST00000517352 TFAP4Q01664 338 aa8.74□□□□□ -1.01
TNFRSF11B-202ENST00000517352 TNFAIP2Q03169 654 aa8.74□□□□□ -1.01
TNFRSF11B-202ENST00000517352 PPIGQ13427 754 aaKnown RBP eCLIP8.74□□□□□ -1.01
TNFRSF11B-202ENST00000517352 CCDC144BQ3MJ40 725 aa8.74□□□□□ -1.01
TNFRSF11B-202ENST00000517352 SBK1Q52WX2 424 aa8.74□□□□□ -1.01
TNFRSF11B-202ENST00000517352 LENG1Q96BZ8 264 aaPredicted RBP8.74□□□□□ -1.01
TNFRSF11B-202ENST00000517352 TIFAQ96CG3 184 aa8.74□□□□□ -1.01
TNFRSF11B-202ENST00000517352 PPP1R12CQ9BZL4 782 aa8.74□□□□□ -1.01
TNFRSF11B-202ENST00000517352 TSPYL2Q9H2G4 693 aaPredicted RBP8.74□□□□□ -1.01
TNFRSF11B-202ENST00000517352 ACAD9Q9H845 621 aa8.74□□□□□ -1.01
TNFRSF11B-202ENST00000517352 GPHNQ9NQX3 736 aaPredicted RBP8.74□□□□□ -1.01
TNFRSF11B-202ENST00000517352 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.74□□□□□ -1.01
TNFRSF11B-202ENST00000517352 ZNF214Q9UL59 606 aaPredicted RBP8.74□□□□□ -1.01
TNFRSF11B-202ENST00000517352 COL6A3P12111 3177 aa8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 A0A0U1RQG5 324 aaPredicted RBP8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 ASB14A6NK59 587 aa8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 KIAA0355O15063 1070 aa8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 RANBP6O60518 1105 aaKnown RBP8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 TIMP1P01033 207 aa8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 ASGR1P07306 291 aa8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 ZNF865P0CJ78 1059 aaPredicted RBP8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 ALAS1P13196 640 aa8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 RASA1P20936 1047 aa8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 CDK11BP21127 795 aaKnown RBP8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 OAZ1P54368 228 aa8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 SNX17Q15036 470 aa8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 CCDC96Q2M329 555 aa8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 BRDTQ58F21 947 aaPredicted RBP8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 PSRC1Q6PGN9 363 aaPredicted RBP8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 ZNF467Q7Z7K2 595 aaPredicted RBP8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 FAM160B2Q86V87 743 aa8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 SIRT2Q8IXJ6 389 aa8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 IFNL3Q8IZI9 196 aa8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 SPRYD3Q8NCJ5 442 aa8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 CEP95Q96GE4 821 aa8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 TOX2Q96NM4 488 aa8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 COL25A1Q9BXS0 654 aaPredicted RBP8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 ADAMTS5Q9UNA0 930 aa8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 ELP1O95163 1332 aa8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 SYNRGQ9UMZ2 1314 aa8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 DOCK3Q8IZD9 2030 aa8.73□□□□□ -1.01
TNFRSF11B-202ENST00000517352 TMEM265A0A087WTH1 108 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 GSG1L2A8MUP6 293 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 B4DLN1 442 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 SMIM22K7EJ46 135 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 DYNC1LI2O43237 492 aaPredicted RBP8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 CABYRO75952 493 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 CHGBP05060 677 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 IGFBP4P22692 258 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 MCCP23508 829 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 DNAJB2P25686 324 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 MRPL12P52815 198 aaKnown RBP8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 CHMP4BP1P59074 171 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 FAAP100Q0VG06 881 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 RRP12Q5JTH9 1297 aaKnown RBP8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 TSHZ3Q63HK5 1081 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 MFSD5Q6N075 450 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 NSMFQ6X4W1 530 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 ARMCX2Q7L311 632 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 ANKRD33Q7Z3H0 272 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 CCDC144CPQ8IYA2 1237 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 TRERF1Q96PN7 1200 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 SLC38A10Q9HBR0 1119 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 RNF146Q9NTX7 359 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 MTMR4Q9NYA4 1195 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 ADD3Q9UEY8 706 aaKnown RBP8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 SYNPO2Q9UMS6 1093 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 NOD1Q9Y239 953 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 RIPK3Q9Y572 518 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 MYH1P12882 1939 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 DNAH12Q6ZR08 3092 aa8.72□□□□□ -1.01
TNFRSF11B-202ENST00000517352 ZBBXA8MT70 800 aa8.71□□□□□ -1.02
TNFRSF11B-202ENST00000517352 ARVCFO00192 962 aa8.71□□□□□ -1.02
TNFRSF11B-202ENST00000517352 ATP2A1O14983 1001 aa8.71□□□□□ -1.02
TNFRSF11B-202ENST00000517352 ADAMTS4O75173 837 aa8.71□□□□□ -1.02
TNFRSF11B-202ENST00000517352 SNAI1O95863 264 aaPredicted RBP8.71□□□□□ -1.02
TNFRSF11B-202ENST00000517352 FGBP02675 491 aa8.71□□□□□ -1.02
TNFRSF11B-202ENST00000517352 PPARAQ07869 468 aa8.71□□□□□ -1.02
TNFRSF11B-202ENST00000517352 RAB30Q15771 203 aa8.71□□□□□ -1.02
TNFRSF11B-202ENST00000517352 TKFCQ3LXA3 575 aa8.71□□□□□ -1.02
TNFRSF11B-202ENST00000517352 FAM47CQ5HY64 1035 aa8.71□□□□□ -1.02
TNFRSF11B-202ENST00000517352 MAMDC4Q6UXC1 1216 aa8.71□□□□□ -1.02
TNFRSF11B-202ENST00000517352 KIAA1211Q6ZU35 1233 aa8.71□□□□□ -1.02
TNFRSF11B-202ENST00000517352 EEPD1Q7L9B9 569 aa8.71□□□□□ -1.02
TNFRSF11B-202ENST00000517352 RPUSD2Q8IZ73 545 aaKnown RBP8.71□□□□□ -1.02
TNFRSF11B-202ENST00000517352 GMCL1P1Q8NEA9 526 aa8.71□□□□□ -1.02
TNFRSF11B-202ENST00000517352 STAG1Q8WVM7 1258 aa8.71□□□□□ -1.02
TNFRSF11B-202ENST00000517352 OSBP2Q969R2 916 aa8.71□□□□□ -1.02
TNFRSF11B-202ENST00000517352 ZNF576Q9H609 170 aa8.71□□□□□ -1.02
TNFRSF11B-202ENST00000517352 SLC28A3Q9HAS3 691 aa8.71□□□□□ -1.02
TNFRSF11B-202ENST00000517352 CCPG1Q9ULG6 757 aa8.71□□□□□ -1.02
TNFRSF11B-202ENST00000517352 TTC41PQ6P2S7 1318 aa8.71□□□□□ -1.02
TNFRSF11B-202ENST00000517352 CUL9Q8IWT3 2517 aa8.71□□□□□ -1.02
TNFRSF11B-202ENST00000517352 PTPDC1A2A3K4 754 aa8.7□□□□□ -1.02
TNFRSF11B-202ENST00000517352 M0R2C6 588 aa8.7□□□□□ -1.02
TNFRSF11B-202ENST00000517352 ACRP10323 421 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms