RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 IKQ13123 557 aaPredicted RBP17.33■□□□□ 0.36
SCARNA20.5-201ENST00000516991 TKFCQ3LXA3 575 aa17.33■□□□□ 0.36
SCARNA20.5-201ENST00000516991 C9orf50Q5SZB4 431 aa17.33■□□□□ 0.36
SCARNA20.5-201ENST00000516991 PCSK9Q8NBP7 692 aaKnown RBP17.33■□□□□ 0.36
SCARNA20.5-201ENST00000516991 GUCD1Q96NT3 240 aa17.33■□□□□ 0.36
SCARNA20.5-201ENST00000516991 ACAD9Q9H845 621 aa17.33■□□□□ 0.36
SCARNA20.5-201ENST00000516991 ELP1O95163 1332 aa17.32■□□□□ 0.36
SCARNA20.5-201ENST00000516991 TMEM232C9JQI7 657 aa17.32■□□□□ 0.36
SCARNA20.5-201ENST00000516991 PLA2G6O60733 806 aa17.32■□□□□ 0.36
SCARNA20.5-201ENST00000516991 SLC1A4P43007 532 aa17.32■□□□□ 0.36
SCARNA20.5-201ENST00000516991 ARMCX2Q7L311 632 aa17.32■□□□□ 0.36
SCARNA20.5-201ENST00000516991 OTUD7AQ8TE49 926 aaPredicted RBP17.32■□□□□ 0.36
SCARNA20.5-201ENST00000516991 STAG1Q8WVM7 1258 aa17.32■□□□□ 0.36
SCARNA20.5-201ENST00000516991 FGD4Q96M96 766 aa17.32■□□□□ 0.36
SCARNA20.5-201ENST00000516991 GLT1D1Q96MS3 346 aa17.32■□□□□ 0.36
SCARNA20.5-201ENST00000516991 UPF3AQ9H1J1 476 aaKnown RBP17.32■□□□□ 0.36
SCARNA20.5-201ENST00000516991 TMEM39AQ9NV64 488 aa17.32■□□□□ 0.36
SCARNA20.5-201ENST00000516991 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.32■□□□□ 0.36
SCARNA20.5-201ENST00000516991 LAMA2P24043 3122 aaKnown RBP17.32■□□□□ 0.36
SCARNA20.5-201ENST00000516991 SALL3Q9BXA9 1300 aa17.31■□□□□ 0.36
SCARNA20.5-201ENST00000516991 TSPY2A6NKD2 308 aa17.31■□□□□ 0.36
SCARNA20.5-201ENST00000516991 FPGSQ05932 587 aa17.31■□□□□ 0.36
SCARNA20.5-201ENST00000516991 KCNA10Q16322 511 aa17.31■□□□□ 0.36
SCARNA20.5-201ENST00000516991 CCDC144BQ3MJ40 725 aa17.31■□□□□ 0.36
SCARNA20.5-201ENST00000516991 CCSAPQ6IQ19 270 aaPredicted RBP17.31■□□□□ 0.36
SCARNA20.5-201ENST00000516991 RNPC3Q96LT9 517 aaKnown RBP17.31■□□□□ 0.36
SCARNA20.5-201ENST00000516991 HOMER2Q9NSB8 354 aa17.31■□□□□ 0.36
SCARNA20.5-201ENST00000516991 RNF146Q9NTX7 359 aa17.31■□□□□ 0.36
SCARNA20.5-201ENST00000516991 TMEM265A0A087WTH1 108 aa17.3■□□□□ 0.36
SCARNA20.5-201ENST00000516991 C6orf222P0C671 652 aaPredicted RBP17.3■□□□□ 0.36
SCARNA20.5-201ENST00000516991 GJA9P57773 515 aa17.3■□□□□ 0.36
SCARNA20.5-201ENST00000516991 FAM133AQ8N9E0 248 aa17.3■□□□□ 0.36
SCARNA20.5-201ENST00000516991 EVI5LQ96CN4 794 aa17.3■□□□□ 0.36
SCARNA20.5-201ENST00000516991 FAM161BQ96MY7 647 aa17.3■□□□□ 0.36
SCARNA20.5-201ENST00000516991 ANAPC4Q9UJX5 808 aa17.3■□□□□ 0.36
SCARNA20.5-201ENST00000516991 STX8Q9UNK0 236 aa17.3■□□□□ 0.36
SCARNA20.5-201ENST00000516991 LRRC37A2A6NM11 1700 aa17.3■□□□□ 0.36
SCARNA20.5-201ENST00000516991 A0A0C4DFX4 3053 aa17.29■□□□□ 0.36
SCARNA20.5-201ENST00000516991 MYADML2A6NDP7 307 aa17.29■□□□□ 0.36
SCARNA20.5-201ENST00000516991 ASB14A6NK59 587 aa17.29■□□□□ 0.36
SCARNA20.5-201ENST00000516991 MCCP23508 829 aa17.29■□□□□ 0.36
SCARNA20.5-201ENST00000516991 ITGB8P26012 769 aa17.29■□□□□ 0.36
SCARNA20.5-201ENST00000516991 RRP1P56182 461 aaKnown RBP17.29■□□□□ 0.36
SCARNA20.5-201ENST00000516991 FAAP100Q0VG06 881 aa17.29■□□□□ 0.36
SCARNA20.5-201ENST00000516991 TICAM2Q86XR7 235 aa17.29■□□□□ 0.36
SCARNA20.5-201ENST00000516991 CCDC144CPQ8IYA2 1237 aa17.29■□□□□ 0.36
SCARNA20.5-201ENST00000516991 A1CFQ9NQ94 594 aaKnown RBP17.29■□□□□ 0.36
SCARNA20.5-201ENST00000516991 ZNF536O15090 1300 aa17.28■□□□□ 0.36
SCARNA20.5-201ENST00000516991 A0A0U1RQG5 324 aaPredicted RBP17.28■□□□□ 0.36
SCARNA20.5-201ENST00000516991 FOXP2O15409 715 aa17.28■□□□□ 0.36
SCARNA20.5-201ENST00000516991 ORC4O43929 436 aa17.28■□□□□ 0.36
SCARNA20.5-201ENST00000516991 ASGR1P07306 291 aa17.28■□□□□ 0.36
SCARNA20.5-201ENST00000516991 NKX3-2P78367 333 aa17.28■□□□□ 0.36
SCARNA20.5-201ENST00000516991 ALX1Q15699 326 aa17.28■□□□□ 0.36
SCARNA20.5-201ENST00000516991 RCSD1Q6JBY9 416 aa17.28■□□□□ 0.36
SCARNA20.5-201ENST00000516991 CCDC174Q6PII3 467 aa17.28■□□□□ 0.36
SCARNA20.5-201ENST00000516991 CCDC129Q6ZRS4 1044 aa17.28■□□□□ 0.36
SCARNA20.5-201ENST00000516991 KATNBL1Q9H079 304 aa17.28■□□□□ 0.36
SCARNA20.5-201ENST00000516991 TBX21Q9UL17 535 aa17.28■□□□□ 0.36
SCARNA20.5-201ENST00000516991 TLR3O15455 904 aaKnown RBP17.27■□□□□ 0.36
SCARNA20.5-201ENST00000516991 ADCY6O43306 1168 aa17.27■□□□□ 0.36
SCARNA20.5-201ENST00000516991 RANBP6O60518 1105 aaKnown RBP17.27■□□□□ 0.36
SCARNA20.5-201ENST00000516991 TIMP1P01033 207 aa17.27■□□□□ 0.36
SCARNA20.5-201ENST00000516991 ALAS1P13196 640 aa17.27■□□□□ 0.36
SCARNA20.5-201ENST00000516991 CNTN2Q02246 1040 aa17.27■□□□□ 0.36
SCARNA20.5-201ENST00000516991 CTDSPL2Q05D32 466 aa17.27■□□□□ 0.36
SCARNA20.5-201ENST00000516991 GNASQ5JWF2 1037 aa17.27■□□□□ 0.36
SCARNA20.5-201ENST00000516991 ANKRD45Q5TZF3 282 aa17.27■□□□□ 0.36
SCARNA20.5-201ENST00000516991 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.27■□□□□ 0.36
SCARNA20.5-201ENST00000516991 DCAF4Q8WV16 495 aa17.27■□□□□ 0.36
SCARNA20.5-201ENST00000516991 AGBL1Q96MI9 1066 aa17.27■□□□□ 0.36
SCARNA20.5-201ENST00000516991 TRERF1Q96PN7 1200 aa17.27■□□□□ 0.36
SCARNA20.5-201ENST00000516991 SEMA6BQ9H3T3 888 aa17.27■□□□□ 0.36
SCARNA20.5-201ENST00000516991 HELLSQ9NRZ9 838 aa17.27■□□□□ 0.36
SCARNA20.5-201ENST00000516991 NOVP48745 357 aa17.26■□□□□ 0.35
SCARNA20.5-201ENST00000516991 CDK7P50613 346 aa17.26■□□□□ 0.35
SCARNA20.5-201ENST00000516991 EPHB4P54760 987 aa17.26■□□□□ 0.35
SCARNA20.5-201ENST00000516991 TNFAIP2Q03169 654 aa17.26■□□□□ 0.35
SCARNA20.5-201ENST00000516991 PPIGQ13427 754 aaKnown RBP eCLIP17.26■□□□□ 0.35
SCARNA20.5-201ENST00000516991 CCDC96Q2M329 555 aa17.26■□□□□ 0.35
SCARNA20.5-201ENST00000516991 KCTD1Q719H9 257 aa17.26■□□□□ 0.35
SCARNA20.5-201ENST00000516991 VTI1AQ96AJ9 217 aa17.26■□□□□ 0.35
SCARNA20.5-201ENST00000516991 CDX2Q99626 313 aaPredicted RBP17.26■□□□□ 0.35
SCARNA20.5-201ENST00000516991 IL17RBQ9NRM6 502 aa17.26■□□□□ 0.35
SCARNA20.5-201ENST00000516991 PRR12Q9ULL5 1215 aa17.26■□□□□ 0.35
SCARNA20.5-201ENST00000516991 ZMYM6O95789 1325 aa17.25■□□□□ 0.35
SCARNA20.5-201ENST00000516991 SOWAHBA6NEL2 793 aa17.25■□□□□ 0.35
SCARNA20.5-201ENST00000516991 ARVCFO00192 962 aa17.25■□□□□ 0.35
SCARNA20.5-201ENST00000516991 CABYRO75952 493 aa17.25■□□□□ 0.35
SCARNA20.5-201ENST00000516991 PDE1AP54750 535 aa17.25■□□□□ 0.35
SCARNA20.5-201ENST00000516991 HDAC1Q13547 482 aaPredicted RBP17.25■□□□□ 0.35
SCARNA20.5-201ENST00000516991 MFSD5Q6N075 450 aa17.25■□□□□ 0.35
SCARNA20.5-201ENST00000516991 NOL8Q76FK4 1167 aaKnown RBP17.25■□□□□ 0.35
SCARNA20.5-201ENST00000516991 SEZ6LQ9BYH1 1024 aa17.25■□□□□ 0.35
SCARNA20.5-201ENST00000516991 CCPG1Q9ULG6 757 aa17.25■□□□□ 0.35
SCARNA20.5-201ENST00000516991 NMT2O60551 498 aa17.24■□□□□ 0.35
SCARNA20.5-201ENST00000516991 ICAM1P05362 532 aa17.24■□□□□ 0.35
SCARNA20.5-201ENST00000516991 FGRP09769 529 aa17.24■□□□□ 0.35
SCARNA20.5-201ENST00000516991 VPS53Q5VIR6 699 aa17.24■□□□□ 0.35
SCARNA20.5-201ENST00000516991 TLK2Q86UE8 772 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms