RNA–Protein interactions for RNA: ENST00000516918.1

SCARNA11.1-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 132 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.1-201ENST00000516918 PRDM1O75626 825 aa8.35□□□□□ -1.07
SCARNA11.1-201ENST00000516918 PTGS1P23219 599 aa8.35□□□□□ -1.07
SCARNA11.1-201ENST00000516918 GJA9P57773 515 aa8.35□□□□□ -1.07
SCARNA11.1-201ENST00000516918 CNTN2Q02246 1040 aa8.35□□□□□ -1.07
SCARNA11.1-201ENST00000516918 RASIP1Q5U651 963 aa8.35□□□□□ -1.07
SCARNA11.1-201ENST00000516918 PSRC1Q6PGN9 363 aaPredicted RBP8.35□□□□□ -1.07
SCARNA11.1-201ENST00000516918 CXCL17Q6UXB2 119 aa8.35□□□□□ -1.07
SCARNA11.1-201ENST00000516918 FAM126BQ8IXS8 530 aa8.35□□□□□ -1.07
SCARNA11.1-201ENST00000516918 RPAP2Q8IXW5 612 aaPredicted RBP8.35□□□□□ -1.07
SCARNA11.1-201ENST00000516918 CCDC144CPQ8IYA2 1237 aa8.35□□□□□ -1.07
SCARNA11.1-201ENST00000516918 STRBPQ96SI9 672 aaKnown RBP8.35□□□□□ -1.07
SCARNA11.1-201ENST00000516918 UPF3AQ9H1J1 476 aaKnown RBP8.35□□□□□ -1.07
SCARNA11.1-201ENST00000516918 ABHD16BQ9H3Z7 469 aa8.35□□□□□ -1.07
SCARNA11.1-201ENST00000516918 HOMER2Q9NSB8 354 aa8.35□□□□□ -1.07
SCARNA11.1-201ENST00000516918 CXXC1Q9P0U4 656 aaPredicted RBP8.35□□□□□ -1.07
SCARNA11.1-201ENST00000516918 NYAP2Q9P242 653 aa8.35□□□□□ -1.07
SCARNA11.1-201ENST00000516918 THEGQ9P2T0 379 aa8.35□□□□□ -1.07
SCARNA11.1-201ENST00000516918 ARPP21Q9UBL0 812 aaPredicted RBP8.35□□□□□ -1.07
SCARNA11.1-201ENST00000516918 MSRAQ9UJ68 235 aa8.35□□□□□ -1.07
SCARNA11.1-201ENST00000516918 ISY1Q9ULR0 285 aaKnown RBP8.35□□□□□ -1.07
SCARNA11.1-201ENST00000516918 COG6Q9Y2V7 657 aa8.35□□□□□ -1.07
SCARNA11.1-201ENST00000516918 DDX49Q9Y6V7 483 aaKnown RBP8.35□□□□□ -1.07
SCARNA11.1-201ENST00000516918 MYH8P13535 1937 aa8.35□□□□□ -1.07
SCARNA11.1-201ENST00000516918 PLXNA1Q9UIW2 1896 aa8.34□□□□□ -1.07
SCARNA11.1-201ENST00000516918 UMODL1Q5DID0 1318 aa8.34□□□□□ -1.07
SCARNA11.1-201ENST00000516918 PARP14Q460N5 1801 aa8.34□□□□□ -1.07
SCARNA11.1-201ENST00000516918 GSG1L2A8MUP6 293 aa8.34□□□□□ -1.07
SCARNA11.1-201ENST00000516918 ATP2A1O14983 1001 aa8.34□□□□□ -1.07
SCARNA11.1-201ENST00000516918 CTAGE5O15320 804 aa8.34□□□□□ -1.07
SCARNA11.1-201ENST00000516918 CCL23P55773 120 aa8.34□□□□□ -1.07
SCARNA11.1-201ENST00000516918 MRPS5P82675 430 aaKnown RBP8.34□□□□□ -1.07
SCARNA11.1-201ENST00000516918 RAB30Q15771 203 aa8.34□□□□□ -1.07
SCARNA11.1-201ENST00000516918 AKNAD1Q5T1N1 836 aa8.34□□□□□ -1.07
SCARNA11.1-201ENST00000516918 ZSCAN25Q6NSZ9 544 aa8.34□□□□□ -1.07
SCARNA11.1-201ENST00000516918 OTOP2Q7RTS6 562 aa8.34□□□□□ -1.07
SCARNA11.1-201ENST00000516918 ZNF467Q7Z7K2 595 aaPredicted RBP8.34□□□□□ -1.07
SCARNA11.1-201ENST00000516918 LRRC47Q8N1G4 583 aaKnown RBP8.34□□□□□ -1.07
SCARNA11.1-201ENST00000516918 MICALL1Q8N3F8 863 aa8.34□□□□□ -1.07
SCARNA11.1-201ENST00000516918 CHST13Q8NET6 341 aa8.34□□□□□ -1.07
SCARNA11.1-201ENST00000516918 ADAMTS19Q8TE59 1207 aa8.34□□□□□ -1.07
SCARNA11.1-201ENST00000516918 ATXN2LQ8WWM7 1075 aaKnown RBP8.34□□□□□ -1.07
SCARNA11.1-201ENST00000516918 HERVK_113Q902F9 699 aa8.34□□□□□ -1.07
SCARNA11.1-201ENST00000516918 ASB2Q96Q27 587 aa8.34□□□□□ -1.07
SCARNA11.1-201ENST00000516918 SLC38A10Q9HBR0 1119 aa8.34□□□□□ -1.07
SCARNA11.1-201ENST00000516918 IL23AQ9NPF7 189 aa8.34□□□□□ -1.07
SCARNA11.1-201ENST00000516918 FEM1BQ9UK73 627 aa8.34□□□□□ -1.07
SCARNA11.1-201ENST00000516918 YBX2Q9Y2T7 364 aaKnown RBP8.34□□□□□ -1.07
SCARNA11.1-201ENST00000516918 ASTN1O14525 1302 aa8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 IGKV6D-41A0A0C4DH26 115 aa8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 DYNC1LI2O43237 492 aaPredicted RBP8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 CD4P01730 458 aa8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 FGBP02675 491 aa8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 MYOGP15173 224 aa8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 RABGGTBP53611 331 aa8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 SNAP25P60880 206 aa8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 TNFAIP2Q03169 654 aa8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 SBK1Q52WX2 424 aa8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 SLFN13Q68D06 897 aa8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 EEPD1Q7L9B9 569 aa8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 ZNF444Q8N0Y2 327 aaPredicted RBP8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 IL27Q8NEV9 243 aa8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 OSBP2Q969R2 916 aa8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 CEP95Q96GE4 821 aa8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 NECAB3Q96P71 396 aaPredicted RBP8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 UHRF1Q96T88 793 aaPredicted RBP8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 KATNBL1Q9H079 304 aa8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 TRPV6Q9H1D0 765 aa8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 MTIF3Q9H2K0 278 aaKnown RBP8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 HIPK3Q9H422 1215 aa8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 SLC28A3Q9HAS3 691 aa8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 ZBTB40Q9NUA8 1239 aa8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 FBXO40Q9UH90 709 aa8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 MCM3APO60318 1980 aa8.33□□□□□ -1.08
SCARNA11.1-201ENST00000516918 EYSQ5T1H1 3165 aa8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 SOWAHBA6NEL2 793 aa8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 ZBBXA8MT70 800 aa8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 TMEM232C9JQI7 657 aa8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 APPP05067 770 aa8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 BMP3P12645 472 aa8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 SMPD1P17405 629 aa8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 TDO2P48775 406 aa8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 PSMC6P62333 389 aa8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 IKQ13123 557 aaPredicted RBP8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 ITGA7Q13683 1181 aa8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 FSCN1Q16658 493 aaKnown RBP8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 TMEM63BQ5T3F8 832 aa8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 TSHZ3Q63HK5 1081 aa8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 TLK2Q86UE8 772 aa8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 FAM133AQ8N9E0 248 aa8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 MKL1Q969V6 931 aa8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 SCLYQ96I15 445 aa8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 AGBL1Q96MI9 1066 aa8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 NOC4LQ9BVI4 516 aaKnown RBP8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 AP5M1Q9H0R1 490 aa8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 ACAD9Q9H845 621 aa8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 EPB41L4AQ9HCS5 686 aaPredicted RBP8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 A1CFQ9NQ94 594 aaKnown RBP8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 PDGFCQ9NRA1 345 aa8.32□□□□□ -1.08
SCARNA11.1-201ENST00000516918 RNF146Q9NTX7 359 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms