RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	MARCKS	P29966	332 aa	Predicted RBP	5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	TRAPPC10	P48553	1259 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	NLRP5	P59047	1200 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	TCP10	Q12799	353 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	TNIP1	Q15025	636 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	CAMK4	Q16566	473 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	UVSSA	Q2YD98	709 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	CERKL	Q49MI3	558 aa	Predicted RBP	5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	ASPRV1	Q53RT3	343 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	EARS2	Q5JPH6	523 aa	Known RBP	5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	WWC2	Q6AWC2	1192 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	CIAPIN1	Q6FI81	312 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	GALNT17	Q6IS24	598 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	TYW1B	Q6NUM6	668 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	USP17L2	Q6R6M4	530 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	SHC4	Q6S5L8	630 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	SIAH1	Q8IUQ4	282 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	GPIHBP1	Q8IV16	184 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	OGFOD1	Q8N543	542 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	ZNF713	Q8N859	430 aa	Predicted RBP	5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	DAGLB	Q8NCG7	672 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	TMC2	Q8TDI7	906 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	PPP1R9B	Q96SB3	815 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	KANSL2	Q9H9L4	492 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	CABP5	Q9NP86	173 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	BARHL2	Q9NY43	387 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	TMOD2	Q9NZR1	351 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	CLIP2	Q9UDT6	1046 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	HERC5	Q9UII4	1024 aa	Known RBP	5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	FBXO2	Q9UK22	296 aa	Predicted RBP	5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	PCDHA4	Q9UN74	947 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	CEP131	Q9UPN4	1083 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	HPSE	Q9Y251	543 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	PCDHB6	Q9Y5E3	794 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	SRPRB	Q9Y5M8	271 aa	Known RBP	5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	SIPA1L1	O43166	1804 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	CNTNAP1	P78357	1384 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	GREB1L	Q9C091	1923 aa	Predicted RBP	5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854		A0A1B0GVL5	298 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	TRIM75P	A6NK02	468 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	FAM196B	A6NMK8	535 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	TCP10L2	B9ZVM9	353 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	FZD9	O00144	591 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	MPHOSPH10	O00566	681 aa	Known RBP	5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	ADAMTS3	O15072	1205 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	TBC1D12	O60347	775 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	KIN	O60870	393 aa	Known RBP	5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	BMP15	O95972	392 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	CCDC192	P0DO97	292 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	EEF2	P13639	858 aa	Known RBP	5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	PFKFB1	P16118	471 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	RPS12	P25398	132 aa	Known RBP	5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	NDUFA8	P51970	172 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	EIF6	P56537	245 aa	Known RBP	5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	ZNF280A	P59817	542 aa	Predicted RBP	5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	JAG1	P78504	1218 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	MAP3K10	Q02779	954 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	TYRO3	Q06418	890 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	ZNF543	Q08ER8	600 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	RRP1B	Q14684	758 aa	Known RBP	5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	ABCB5	Q2M3G0	1257 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	NOM1	Q5C9Z4	860 aa	Known RBP	5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	GPATCH4	Q5T3I0	446 aa	Known RBP	5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	RBM26	Q5T8P6	1007 aa	Known RBP	5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	RESP18	Q5W5W9	173 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	TMEM179	Q6ZVK1	233 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	RASGRP2	Q7LDG7	609 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	FAM83A	Q86UY5	434 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	CLEC10A	Q8IUN9	316 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	CKAP2L	Q8IYA6	745 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	ELOA2	Q8IYF1	753 aa	Predicted RBP	5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	BLID	Q8IZY5	108 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	LRRC47	Q8N1G4	583 aa	Known RBP	5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	KRI1	Q8N9T8	703 aa	Known RBP	5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	CCDC148	Q8NFR7	591 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	JDP2	Q8WYK2	163 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	5.14	□□□□□ -1.59	2e-6	■■□□□ 13
ATP2C1-223	ENST00000515854	MTMR8	Q96EF0	704 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	RRP36	Q96EU6	259 aa	Known RBP	5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	TIGD1	Q96MW7	591 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	PIGS	Q96S52	555 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	TRIM34	Q9BYJ4	488 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	UBA5	Q9GZZ9	404 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	ZMYND12	Q9H0C1	365 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	CPVL	Q9H3G5	476 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	PGAP2	Q9UHJ9	254 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	SYNPO2	Q9UMS6	1093 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	NOL7	Q9UMY1	257 aa	Known RBP	5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	MTMR7	Q9Y216	660 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	BCS1L	Q9Y276	419 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	MRVI1	Q9Y6F6	885 aa		5.14	□□□□□ -1.59
ATP2C1-223	ENST00000515854	BRCA1	P38398	1863 aa	Known RBP	5.13	□□□□□ -1.59
ATP2C1-223	ENST00000515854	FER1L6	Q2WGJ9	1857 aa		5.13	□□□□□ -1.59
ATP2C1-223	ENST00000515854	PNMA6F	A0A0J9YX94	578 aa		5.13	□□□□□ -1.59
ATP2C1-223	ENST00000515854	ESYT2	A0FGR8	921 aa		5.13	□□□□□ -1.59
ATP2C1-223	ENST00000515854	CLRN2	A0PK11	232 aa		5.13	□□□□□ -1.59
ATP2C1-223	ENST00000515854	WNT10B	O00744	389 aa		5.13	□□□□□ -1.59
ATP2C1-223	ENST00000515854	WNT7A	O00755	349 aa		5.13	□□□□□ -1.59
ATP2C1-223	ENST00000515854	GPR37	O15354	613 aa		5.13	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms