RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 DZANK1Q9NVP4 752 aa9.8□□□□□ -0.84
SFXN1-211ENST00000515736 RNF181Q9P0P0 153 aa9.8□□□□□ -0.84
SFXN1-211ENST00000515736 PCDHGC4Q9Y5F7 938 aa9.8□□□□□ -0.84
SFXN1-211ENST00000515736 TNRC6CQ9HCJ0 1690 aaKnown RBP9.8□□□□□ -0.84
SFXN1-211ENST00000515736 ENC1O14682 589 aa9.79□□□□□ -0.84
SFXN1-211ENST00000515736 KHNYNO15037 678 aaKnown RBP9.79□□□□□ -0.84
SFXN1-211ENST00000515736 ANXA1P04083 346 aa9.79□□□□□ -0.84
SFXN1-211ENST00000515736 BMP1P13497 986 aa9.79□□□□□ -0.84
SFXN1-211ENST00000515736 NFKB1P19838 968 aa9.79□□□□□ -0.84
SFXN1-211ENST00000515736 KCNA3P22001 575 aa9.79□□□□□ -0.84
SFXN1-211ENST00000515736 MCM4P33991 863 aa9.79□□□□□ -0.84
SFXN1-211ENST00000515736 LAMC2Q13753 1193 aa9.79□□□□□ -0.84
SFXN1-211ENST00000515736 CWF19L2Q2TBE0 894 aaKnown RBP9.79□□□□□ -0.84
SFXN1-211ENST00000515736 SKOR2Q2VWA4 1001 aaPredicted RBP9.79□□□□□ -0.84
SFXN1-211ENST00000515736 PCNX4Q63HM2 1172 aa9.79□□□□□ -0.84
SFXN1-211ENST00000515736 AGMOQ6ZNB7 445 aa9.79□□□□□ -0.84
SFXN1-211ENST00000515736 DNAJC10Q8IXB1 793 aa9.79□□□□□ -0.84
SFXN1-211ENST00000515736 CEP120Q8N960 986 aa9.79□□□□□ -0.84
SFXN1-211ENST00000515736 EVI5LQ96CN4 794 aa9.79□□□□□ -0.84
SFXN1-211ENST00000515736 SUCLG2Q96I99 432 aa9.79□□□□□ -0.84
SFXN1-211ENST00000515736 NECAB3Q96P71 396 aaPredicted RBP9.79□□□□□ -0.84
SFXN1-211ENST00000515736 PNMA5Q96PV4 448 aa9.79□□□□□ -0.84
SFXN1-211ENST00000515736 TRIM55Q9BYV6 548 aa9.79□□□□□ -0.84
SFXN1-211ENST00000515736 EFCC1Q9HA90 598 aa9.79□□□□□ -0.84
SFXN1-211ENST00000515736 PRKAG3Q9UGI9 489 aa9.79□□□□□ -0.84
SFXN1-211ENST00000515736 DNMT3LQ9UJW3 386 aa9.79□□□□□ -0.84
SFXN1-211ENST00000515736 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.79□□□□□ -0.84
SFXN1-211ENST00000515736 DLEC1Q9Y238 1755 aa9.78□□□□□ -0.84
SFXN1-211ENST00000515736 DCDC2BA2VCK2 349 aa9.78□□□□□ -0.84
SFXN1-211ENST00000515736 PRAMEF22A3QJZ6 481 aa9.78□□□□□ -0.84
SFXN1-211ENST00000515736 GOLGA6L22H0YM25 854 aa9.78□□□□□ -0.84
SFXN1-211ENST00000515736 SGSM2O43147 1006 aa9.78□□□□□ -0.84
SFXN1-211ENST00000515736 TRPA1O75762 1119 aa9.78□□□□□ -0.84
SFXN1-211ENST00000515736 MAP3K6O95382 1288 aa9.78□□□□□ -0.84
SFXN1-211ENST00000515736 TFE3P19532 575 aaPredicted RBP9.78□□□□□ -0.84
SFXN1-211ENST00000515736 PLAURQ03405 335 aa9.78□□□□□ -0.84
SFXN1-211ENST00000515736 TNP2Q05952 138 aa9.78□□□□□ -0.84
SFXN1-211ENST00000515736 APOBRQ0VD83 1088 aa9.78□□□□□ -0.84
SFXN1-211ENST00000515736 UBAP2LQ14157 1087 aaKnown RBP9.78□□□□□ -0.84
SFXN1-211ENST00000515736 SPRED3Q2MJR0 410 aa9.78□□□□□ -0.84
SFXN1-211ENST00000515736 TTBK2Q6IQ55 1244 aa9.78□□□□□ -0.84
SFXN1-211ENST00000515736 INTS5Q6P9B9 1019 aaKnown RBP9.78□□□□□ -0.84
SFXN1-211ENST00000515736 TRIM46Q7Z4K8 759 aa9.78□□□□□ -0.84
SFXN1-211ENST00000515736 SLITRK4Q8IW52 837 aa9.78□□□□□ -0.84
SFXN1-211ENST00000515736 CCDC191Q8NCU4 936 aa9.78□□□□□ -0.84
SFXN1-211ENST00000515736 CPLX3Q8WVH0 158 aa9.78□□□□□ -0.84
SFXN1-211ENST00000515736 HNRNPLLQ8WVV9 542 aaKnown RBP9.78□□□□□ -0.84
SFXN1-211ENST00000515736 NKD1Q969G9 470 aa9.78□□□□□ -0.84
SFXN1-211ENST00000515736 RILPL2Q969X0 211 aa9.78□□□□□ -0.84
SFXN1-211ENST00000515736 INTS4Q96HW7 963 aaKnown RBP9.78□□□□□ -0.84
SFXN1-211ENST00000515736 SRPK1Q96SB4 655 aaKnown RBP9.78□□□□□ -0.84
SFXN1-211ENST00000515736 MYD88Q99836 296 aa9.78□□□□□ -0.84
SFXN1-211ENST00000515736 BHLHE41Q9C0J9 482 aaPredicted RBP9.78□□□□□ -0.84
SFXN1-211ENST00000515736 BICC1Q9H694 974 aaKnown RBP9.78□□□□□ -0.84
SFXN1-211ENST00000515736 IL1RAPL2Q9NP60 686 aa9.78□□□□□ -0.84
SFXN1-211ENST00000515736 GPR108Q9NPR9 543 aa9.78□□□□□ -0.84
SFXN1-211ENST00000515736 USP16Q9Y5T5 823 aa9.78□□□□□ -0.84
SFXN1-211ENST00000515736 CEP350Q5VT06 3117 aa9.78□□□□□ -0.84
SFXN1-211ENST00000515736 TIAM2Q8IVF5 1701 aa9.77□□□□□ -0.85
SFXN1-211ENST00000515736 METTL12A8MUP2 240 aa9.77□□□□□ -0.85
SFXN1-211ENST00000515736 NFKBIEO00221 500 aa9.77□□□□□ -0.85
SFXN1-211ENST00000515736 POLRMTO00411 1230 aaKnown RBP9.77□□□□□ -0.85
SFXN1-211ENST00000515736 MYL6BP14649 208 aa9.77□□□□□ -0.85
SFXN1-211ENST00000515736 HSPA4P34932 840 aa9.77□□□□□ -0.85
SFXN1-211ENST00000515736 CRKP46108 304 aa9.77□□□□□ -0.85
SFXN1-211ENST00000515736 RPS26P62854 115 aaKnown RBP9.77□□□□□ -0.85
SFXN1-211ENST00000515736 AIMP1Q12904 312 aaKnown RBP9.77□□□□□ -0.85
SFXN1-211ENST00000515736 TRIM28Q13263 835 aaKnown RBP9.77□□□□□ -0.85
SFXN1-211ENST00000515736 GRIN2CQ14957 1233 aa9.77□□□□□ -0.85
SFXN1-211ENST00000515736 KIAA1211Q6ZU35 1233 aa9.77□□□□□ -0.85
SFXN1-211ENST00000515736 KAZALD1Q96I82 304 aa9.77□□□□□ -0.85
SFXN1-211ENST00000515736 SRRTQ9BXP5 876 aaKnown RBP9.77□□□□□ -0.85
SFXN1-211ENST00000515736 SEC31BQ9NQW1 1179 aa9.77□□□□□ -0.85
SFXN1-211ENST00000515736 CWC25Q9NXE8 425 aaPredicted RBP9.77□□□□□ -0.85
SFXN1-211ENST00000515736 PLA2G2EQ9NZK7 142 aa9.77□□□□□ -0.85
SFXN1-211ENST00000515736 HCN2Q9UL51 889 aa9.77□□□□□ -0.85
SFXN1-211ENST00000515736 NUP98P52948 1817 aa9.77□□□□□ -0.85
SFXN1-211ENST00000515736 CACNA1SQ13698 1873 aa9.76□□□□□ -0.85
SFXN1-211ENST00000515736 LAMB2P55268 1798 aa9.76□□□□□ -0.85
SFXN1-211ENST00000515736 H7C1W4 665 aa9.76□□□□□ -0.85
SFXN1-211ENST00000515736 ENPP3O14638 875 aa9.76□□□□□ -0.85
SFXN1-211ENST00000515736 STARD3NLO95772 234 aa9.76□□□□□ -0.85
SFXN1-211ENST00000515736 AVPP01185 164 aa9.76□□□□□ -0.85
SFXN1-211ENST00000515736 MAPTP10636 758 aaKnown RBP9.76□□□□□ -0.85
SFXN1-211ENST00000515736 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.76□□□□□ -0.85
SFXN1-211ENST00000515736 HSP90AB3PQ58FF7 597 aa9.76□□□□□ -0.85
SFXN1-211ENST00000515736 TMEM102Q8N9M5 508 aaPredicted RBP9.76□□□□□ -0.85
SFXN1-211ENST00000515736 NXPE3Q969Y0 559 aa9.76□□□□□ -0.85
SFXN1-211ENST00000515736 ANAPC16Q96DE5 110 aa9.76□□□□□ -0.85
SFXN1-211ENST00000515736 SHDQ96IW2 340 aa9.76□□□□□ -0.85
SFXN1-211ENST00000515736 HHIPQ96QV1 700 aa9.76□□□□□ -0.85
SFXN1-211ENST00000515736 RRAGCQ9HB90 399 aa9.76□□□□□ -0.85
SFXN1-211ENST00000515736 DIAPH3Q9NSV4 1193 aa9.76□□□□□ -0.85
SFXN1-211ENST00000515736 MYH7P12883 1935 aa9.76□□□□□ -0.85
SFXN1-211ENST00000515736 A0A096LPE4 126 aa9.75□□□□□ -0.85
SFXN1-211ENST00000515736 A0A1W2PPZ6 126 aa9.75□□□□□ -0.85
SFXN1-211ENST00000515736 PAGE1O75459 146 aa9.75□□□□□ -0.85
SFXN1-211ENST00000515736 CIAO1O76071 339 aa9.75□□□□□ -0.85
SFXN1-211ENST00000515736 CLSTN1O94985 981 aa9.75□□□□□ -0.85
SFXN1-211ENST00000515736 CYP19A1P11511 503 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms