RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-224	ENST00000515711	RESP18	Q5W5W9	173 aa		13.65	□□□□□ -0.22
LMNA-224	ENST00000515711	PIK3AP1	Q6ZUJ8	805 aa		13.65	□□□□□ -0.22
LMNA-224	ENST00000515711	RASGRP2	Q7LDG7	609 aa		13.65	□□□□□ -0.22
LMNA-224	ENST00000515711	TEX2	Q8IWB9	1127 aa		13.65	□□□□□ -0.22
LMNA-224	ENST00000515711	MTMR8	Q96EF0	704 aa		13.65	□□□□□ -0.22
LMNA-224	ENST00000515711	FUCA2	Q9BTY2	467 aa		13.65	□□□□□ -0.22
LMNA-224	ENST00000515711	TMEM39B	Q9GZU3	492 aa		13.65	□□□□□ -0.22
LMNA-224	ENST00000515711	GPCPD1	Q9NPB8	672 aa		13.65	□□□□□ -0.22
LMNA-224	ENST00000515711	PGAP2	Q9UHJ9	254 aa		13.65	□□□□□ -0.22
LMNA-224	ENST00000515711	CLEC11A	Q9Y240	323 aa		13.65	□□□□□ -0.22
LMNA-224	ENST00000515711	PCDHB6	Q9Y5E3	794 aa		13.65	□□□□□ -0.22
LMNA-224	ENST00000515711	SRPRB	Q9Y5M8	271 aa	Known RBP	13.65	□□□□□ -0.22
LMNA-224	ENST00000515711	PPP2R3B	Q9Y5P8	575 aa		13.65	□□□□□ -0.22
LMNA-224	ENST00000515711	THSD7B	Q9C0I4	1608 aa		13.64	□□□□□ -0.23
LMNA-224	ENST00000515711		F5H6K3	240 aa		13.64	□□□□□ -0.23
LMNA-224	ENST00000515711	ZBTB5	O15062	677 aa		13.64	□□□□□ -0.23
LMNA-224	ENST00000515711	XRCC6	P12956	609 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
LMNA-224	ENST00000515711	PFKFB1	P16118	471 aa		13.64	□□□□□ -0.23
LMNA-224	ENST00000515711	ADCY7	P51828	1080 aa		13.64	□□□□□ -0.23
LMNA-224	ENST00000515711	KLRC3	Q07444	240 aa		13.64	□□□□□ -0.23
LMNA-224	ENST00000515711	UVSSA	Q2YD98	709 aa		13.64	□□□□□ -0.23
LMNA-224	ENST00000515711	DCAF15	Q66K64	600 aa		13.64	□□□□□ -0.23
LMNA-224	ENST00000515711	MAP1S	Q66K74	1059 aa	Predicted RBP	13.64	□□□□□ -0.23
LMNA-224	ENST00000515711	SASS6	Q6UVJ0	657 aa		13.64	□□□□□ -0.23
LMNA-224	ENST00000515711	ADGRF4	Q8IZF3	695 aa		13.64	□□□□□ -0.23
LMNA-224	ENST00000515711	CCDC34	Q96HJ3	373 aa		13.64	□□□□□ -0.23
LMNA-224	ENST00000515711	CAPNS2	Q96L46	248 aa		13.64	□□□□□ -0.23
LMNA-224	ENST00000515711	UBA5	Q9GZZ9	404 aa		13.64	□□□□□ -0.23
LMNA-224	ENST00000515711	FBXO2	Q9UK22	296 aa	Predicted RBP	13.64	□□□□□ -0.23
LMNA-224	ENST00000515711	HPSE	Q9Y251	543 aa		13.64	□□□□□ -0.23
LMNA-224	ENST00000515711	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.63	□□□□□ -0.23
LMNA-224	ENST00000515711		A0A1B0GVL5	298 aa		13.63	□□□□□ -0.23
LMNA-224	ENST00000515711	IQCA1L	A6NCM1	817 aa		13.63	□□□□□ -0.23
LMNA-224	ENST00000515711	SMCO2	A6NFE2	343 aa		13.63	□□□□□ -0.23
LMNA-224	ENST00000515711	LAD1	O00515	517 aa		13.63	□□□□□ -0.23
LMNA-224	ENST00000515711	NDUFB10	O96000	172 aa		13.63	□□□□□ -0.23
LMNA-224	ENST00000515711	BMP3	P12645	472 aa		13.63	□□□□□ -0.23
LMNA-224	ENST00000515711	CAP2	P40123	477 aa		13.63	□□□□□ -0.23
LMNA-224	ENST00000515711	SYK	P43405	635 aa		13.63	□□□□□ -0.23
LMNA-224	ENST00000515711	NDUFA8	P51970	172 aa		13.63	□□□□□ -0.23
LMNA-224	ENST00000515711	ATP2C1	P98194	919 aa	Predicted RBP	13.63	□□□□□ -0.23
LMNA-224	ENST00000515711	RASA3	Q14644	834 aa		13.63	□□□□□ -0.23
LMNA-224	ENST00000515711	NONO	Q15233	471 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
LMNA-224	ENST00000515711	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.63	□□□□□ -0.23
LMNA-224	ENST00000515711	MCTP2	Q6DN12	878 aa		13.63	□□□□□ -0.23
LMNA-224	ENST00000515711	CYP4F22	Q6NT55	531 aa		13.63	□□□□□ -0.23
LMNA-224	ENST00000515711	TYW1B	Q6NUM6	668 aa		13.63	□□□□□ -0.23
LMNA-224	ENST00000515711	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.63	□□□□□ -0.23
LMNA-224	ENST00000515711	PYM1	Q9BRP8	204 aa	Known RBP	13.63	□□□□□ -0.23
LMNA-224	ENST00000515711	RBSN	Q9H1K0	784 aa		13.63	□□□□□ -0.23
LMNA-224	ENST00000515711	JMJD4	Q9H9V9	463 aa		13.63	□□□□□ -0.23
LMNA-224	ENST00000515711	GPRC5D	Q9NZD1	345 aa		13.63	□□□□□ -0.23
LMNA-224	ENST00000515711	HOOK1	Q9UJC3	728 aa	Known RBP	13.63	□□□□□ -0.23
LMNA-224	ENST00000515711	PCDHA6	Q9UN73	950 aa		13.63	□□□□□ -0.23
LMNA-224	ENST00000515711	TMX2	Q9Y320	296 aa		13.63	□□□□□ -0.23
LMNA-224	ENST00000515711	PCDHA8	Q9Y5H6	950 aa		13.63	□□□□□ -0.23
LMNA-224	ENST00000515711	FAM205C	A6NFA0	338 aa		13.62	□□□□□ -0.23
LMNA-224	ENST00000515711	ZNF202	O95125	648 aa		13.62	□□□□□ -0.23
LMNA-224	ENST00000515711	TYRO3	Q06418	890 aa		13.62	□□□□□ -0.23
LMNA-224	ENST00000515711	FMR1	Q06787	632 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
LMNA-224	ENST00000515711	CAMK4	Q16566	473 aa		13.62	□□□□□ -0.23
LMNA-224	ENST00000515711	EARS2	Q5JPH6	523 aa	Known RBP	13.62	□□□□□ -0.23
LMNA-224	ENST00000515711	SHC4	Q6S5L8	630 aa		13.62	□□□□□ -0.23
LMNA-224	ENST00000515711	BTNL9	Q6UXG8	535 aa		13.62	□□□□□ -0.23
LMNA-224	ENST00000515711	KCTD1	Q719H9	257 aa		13.62	□□□□□ -0.23
LMNA-224	ENST00000515711	SIAH1	Q8IUQ4	282 aa		13.62	□□□□□ -0.23
LMNA-224	ENST00000515711	REXO1	Q8N1G1	1221 aa	Known RBP	13.62	□□□□□ -0.23
LMNA-224	ENST00000515711	CPVL	Q9H3G5	476 aa		13.62	□□□□□ -0.23
LMNA-224	ENST00000515711	VAT1L	Q9HCJ6	419 aa		13.62	□□□□□ -0.23
LMNA-224	ENST00000515711	HACL1	Q9UJ83	578 aa		13.62	□□□□□ -0.23
LMNA-224	ENST00000515711	PITPNM2	Q9BZ72	1349 aa		13.62	□□□□□ -0.23
LMNA-224	ENST00000515711	MYH7B	A7E2Y1	1941 aa		13.61	□□□□□ -0.23
LMNA-224	ENST00000515711	SHTN1	A0MZ66	631 aa		13.61	□□□□□ -0.23
LMNA-224	ENST00000515711	RAD21	O60216	631 aa		13.61	□□□□□ -0.23
LMNA-224	ENST00000515711	PLA2G6	O60733	806 aa		13.61	□□□□□ -0.23
LMNA-224	ENST00000515711	AOC2	O75106	756 aa		13.61	□□□□□ -0.23
LMNA-224	ENST00000515711	SLURP2	P0DP57	97 aa		13.61	□□□□□ -0.23
LMNA-224	ENST00000515711	ATP2B1	P20020	1258 aa		13.61	□□□□□ -0.23
LMNA-224	ENST00000515711	RRP1B	Q14684	758 aa	Known RBP	13.61	□□□□□ -0.23
LMNA-224	ENST00000515711	CDC37	Q16543	378 aa	Predicted RBP	13.61	□□□□□ -0.23
LMNA-224	ENST00000515711	STX1A	Q16623	288 aa		13.61	□□□□□ -0.23
LMNA-224	ENST00000515711	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.61	□□□□□ -0.23
LMNA-224	ENST00000515711	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.61	□□□□□ -0.23
LMNA-224	ENST00000515711	SYDE2	Q5VT97	1194 aa		13.61	□□□□□ -0.23
LMNA-224	ENST00000515711	TTBK2	Q6IQ55	1244 aa		13.61	□□□□□ -0.23
LMNA-224	ENST00000515711	CUL5	Q93034	780 aa		13.61	□□□□□ -0.23
LMNA-224	ENST00000515711	TEPSIN	Q96N21	525 aa		13.61	□□□□□ -0.23
LMNA-224	ENST00000515711	NAP1L4	Q99733	375 aa	Known RBP	13.61	□□□□□ -0.23
LMNA-224	ENST00000515711	SDF4	Q9BRK5	362 aa		13.61	□□□□□ -0.23
LMNA-224	ENST00000515711	RIC8A	Q9NPQ8	531 aa		13.61	□□□□□ -0.23
LMNA-224	ENST00000515711	USP25	Q9UHP3	1055 aa		13.61	□□□□□ -0.23
LMNA-224	ENST00000515711	PARP14	Q460N5	1801 aa		13.6	□□□□□ -0.23
LMNA-224	ENST00000515711	USP17L10	C9JJH3	530 aa		13.6	□□□□□ -0.23
LMNA-224	ENST00000515711	CTNND1	O60716	968 aa	Known RBP	13.6	□□□□□ -0.23
LMNA-224	ENST00000515711	LMOD1	P29536	600 aa	Predicted RBP	13.6	□□□□□ -0.23
LMNA-224	ENST00000515711	PRPH	P41219	470 aa		13.6	□□□□□ -0.23
LMNA-224	ENST00000515711	STAT2	P52630	851 aa		13.6	□□□□□ -0.23
LMNA-224	ENST00000515711	MRPL12	P52815	198 aa	Known RBP	13.6	□□□□□ -0.23
LMNA-224	ENST00000515711	CCDC173	Q0VFZ6	552 aa		13.6	□□□□□ -0.23
LMNA-224	ENST00000515711	IK	Q13123	557 aa	Predicted RBP	13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms