RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 DOCK3Q8IZD9 2030 aa13.85□□□□□ -0.19
SNF8-215ENST00000515572 CCDC196A0A1B0GTZ2 297 aa13.84□□□□□ -0.19
SNF8-215ENST00000515572 GOLGA8BA8MQT2 603 aa13.84□□□□□ -0.19
SNF8-215ENST00000515572 STRNO43815 780 aa13.84□□□□□ -0.19
SNF8-215ENST00000515572 ICAM1P05362 532 aa13.84□□□□□ -0.19
SNF8-215ENST00000515572 ERCC3P19447 782 aa13.84□□□□□ -0.19
SNF8-215ENST00000515572 CTGFP29279 349 aa13.84□□□□□ -0.19
SNF8-215ENST00000515572 APOBRQ0VD83 1088 aa13.84□□□□□ -0.19
SNF8-215ENST00000515572 TRAF1Q13077 416 aa13.84□□□□□ -0.19
SNF8-215ENST00000515572 TOB2Q14106 344 aaPredicted RBP13.84□□□□□ -0.19
SNF8-215ENST00000515572 RTN1Q16799 776 aa13.84□□□□□ -0.19
SNF8-215ENST00000515572 TKFCQ3LXA3 575 aa13.84□□□□□ -0.19
SNF8-215ENST00000515572 GPR142Q7Z601 462 aa13.84□□□□□ -0.19
SNF8-215ENST00000515572 PLEKHH3Q7Z736 793 aa13.84□□□□□ -0.19
SNF8-215ENST00000515572 NCAPG2Q86XI2 1143 aa13.84□□□□□ -0.19
SNF8-215ENST00000515572 ABRAQ8N0Z2 381 aa13.84□□□□□ -0.19
SNF8-215ENST00000515572 SOCS4Q8WXH5 440 aa13.84□□□□□ -0.19
SNF8-215ENST00000515572 TBC1D32Q96NH3 1257 aa13.84□□□□□ -0.19
SNF8-215ENST00000515572 SPZ1Q9BXG8 430 aa13.84□□□□□ -0.19
SNF8-215ENST00000515572 RAVER2Q9HCJ3 691 aaKnown RBP13.84□□□□□ -0.19
SNF8-215ENST00000515572 TRIM17Q9Y577 477 aa13.84□□□□□ -0.19
SNF8-215ENST00000515572 IVNS1ABPQ9Y6Y0 642 aa13.84□□□□□ -0.19
SNF8-215ENST00000515572 ZNF536O15090 1300 aa13.84□□□□□ -0.19
SNF8-215ENST00000515572 ZNFX1Q9P2E3 1918 aaKnown RBP13.84□□□□□ -0.19
SNF8-215ENST00000515572 NID2Q14112 1375 aa13.83□□□□□ -0.19
SNF8-215ENST00000515572 RXRAP19793 462 aa13.83□□□□□ -0.2
SNF8-215ENST00000515572 NEK4P51957 841 aa13.83□□□□□ -0.2
SNF8-215ENST00000515572 CDC37Q16543 378 aaPredicted RBP13.83□□□□□ -0.2
SNF8-215ENST00000515572 WDR78Q5VTH9 848 aa13.83□□□□□ -0.2
SNF8-215ENST00000515572 CCDC174Q6PII3 467 aa13.83□□□□□ -0.2
SNF8-215ENST00000515572 CHST13Q8NET6 341 aa13.83□□□□□ -0.2
SNF8-215ENST00000515572 MTMR8Q96EF0 704 aa13.83□□□□□ -0.2
SNF8-215ENST00000515572 ZNF274Q96GC6 653 aaPredicted RBP13.83□□□□□ -0.2
SNF8-215ENST00000515572 CPVLQ9H3G5 476 aa13.83□□□□□ -0.2
SNF8-215ENST00000515572 RIOX1Q9H6W3 641 aa13.83□□□□□ -0.2
SNF8-215ENST00000515572 JMJD4Q9H9V9 463 aa13.83□□□□□ -0.2
SNF8-215ENST00000515572 SRRDQ9UH36 339 aa13.83□□□□□ -0.2
SNF8-215ENST00000515572 FBXO40Q9UH90 709 aa13.83□□□□□ -0.2
SNF8-215ENST00000515572 CCPG1Q9ULG6 757 aa13.83□□□□□ -0.2
SNF8-215ENST00000515572 NAP1L2Q9ULW6 460 aaPredicted RBP13.83□□□□□ -0.2
SNF8-215ENST00000515572 RBBP6Q7Z6E9 1792 aaKnown RBP13.83□□□□□ -0.2
SNF8-215ENST00000515572 SLC15A5A6NIM6 579 aa13.82□□□□□ -0.2
SNF8-215ENST00000515572 GOLGA8AA7E2F4 631 aa13.82□□□□□ -0.2
SNF8-215ENST00000515572 ECM2O94769 699 aaPredicted RBP13.82□□□□□ -0.2
SNF8-215ENST00000515572 FCER1AP12319 257 aa13.82□□□□□ -0.2
SNF8-215ENST00000515572 PTPREP23469 700 aa13.82□□□□□ -0.2
SNF8-215ENST00000515572 METAP2P50579 478 aaKnown RBP eCLIP13.82□□□□□ -0.2
SNF8-215ENST00000515572 SNAP25P60880 206 aa13.82□□□□□ -0.2
SNF8-215ENST00000515572 CAP1Q01518 475 aa13.82□□□□□ -0.2
SNF8-215ENST00000515572 IRF5Q13568 498 aa13.82□□□□□ -0.2
SNF8-215ENST00000515572 RABEP1Q15276 862 aa13.82□□□□□ -0.2
SNF8-215ENST00000515572 TMTC3Q6ZXV5 915 aa13.82□□□□□ -0.2
SNF8-215ENST00000515572 CCDC144CPQ8IYA2 1237 aa13.82□□□□□ -0.2
SNF8-215ENST00000515572 AGBL1Q96MI9 1066 aa13.82□□□□□ -0.2
SNF8-215ENST00000515572 KIF2CQ99661 725 aa13.82□□□□□ -0.2
SNF8-215ENST00000515572 NUDT12Q9BQG2 462 aa13.82□□□□□ -0.2
SNF8-215ENST00000515572 VAT1LQ9HCJ6 419 aa13.82□□□□□ -0.2
SNF8-215ENST00000515572 PLXNA1Q9UIW2 1896 aa13.82□□□□□ -0.2
SNF8-215ENST00000515572 SMCHD1A6NHR9 2005 aa13.81□□□□□ -0.2
SNF8-215ENST00000515572 BAZ2BQ9UIF8 2168 aaKnown RBP13.81□□□□□ -0.2
SNF8-215ENST00000515572 ZBTB5O15062 677 aa13.81□□□□□ -0.2
SNF8-215ENST00000515572 CYTH3O43739 400 aa13.81□□□□□ -0.2
SNF8-215ENST00000515572 ALAS1P13196 640 aa13.81□□□□□ -0.2
SNF8-215ENST00000515572 PDIA3P30101 505 aaKnown RBP13.81□□□□□ -0.2
SNF8-215ENST00000515572 SLC4A3P48751 1232 aa13.81□□□□□ -0.2
SNF8-215ENST00000515572 AK2P54819 239 aa13.81□□□□□ -0.2
SNF8-215ENST00000515572 GRB14Q14449 540 aa13.81□□□□□ -0.2
SNF8-215ENST00000515572 KCTD2Q14681 263 aa13.81□□□□□ -0.2
SNF8-215ENST00000515572 QRICH1Q2TAL8 776 aa13.81□□□□□ -0.2
SNF8-215ENST00000515572 MORN1Q5T089 497 aa13.81□□□□□ -0.2
SNF8-215ENST00000515572 FBXO46Q6PJ61 603 aaPredicted RBP13.81□□□□□ -0.2
SNF8-215ENST00000515572 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.81□□□□□ -0.2
SNF8-215ENST00000515572 RAB11FIP4Q86YS3 637 aa13.81□□□□□ -0.2
SNF8-215ENST00000515572 SRBD1Q8N5C6 995 aaKnown RBP13.81□□□□□ -0.2
SNF8-215ENST00000515572 RRP36Q96EU6 259 aaKnown RBP13.81□□□□□ -0.2
SNF8-215ENST00000515572 AMNQ9BXJ7 453 aa13.81□□□□□ -0.2
SNF8-215ENST00000515572 ACAD9Q9H845 621 aa13.81□□□□□ -0.2
SNF8-215ENST00000515572 SEC63Q9UGP8 760 aaKnown RBP13.81□□□□□ -0.2
SNF8-215ENST00000515572 HPS5Q9UPZ3 1129 aa13.81□□□□□ -0.2
SNF8-215ENST00000515572 PTPN22Q9Y2R2 807 aa13.81□□□□□ -0.2
SNF8-215ENST00000515572 RIPK3Q9Y572 518 aa13.81□□□□□ -0.2
SNF8-215ENST00000515572 PNMA6FA0A0J9YX94 578 aa13.8□□□□□ -0.2
SNF8-215ENST00000515572 PLEKHA8P1O95397 391 aa13.8□□□□□ -0.2
SNF8-215ENST00000515572 RGS2P41220 211 aa13.8□□□□□ -0.2
SNF8-215ENST00000515572 FLT3LGP49771 235 aa13.8□□□□□ -0.2
SNF8-215ENST00000515572 PRKCZQ05513 592 aa13.8□□□□□ -0.2
SNF8-215ENST00000515572 MAP2K5Q13163 448 aa13.8□□□□□ -0.2
SNF8-215ENST00000515572 SLC35G1Q2M3R5 365 aa13.8□□□□□ -0.2
SNF8-215ENST00000515572 NBPF11Q86T75 865 aa13.8□□□□□ -0.2
SNF8-215ENST00000515572 FBXO11Q86XK2 927 aa13.8□□□□□ -0.2
SNF8-215ENST00000515572 RAET1EQ8TD07 263 aa13.8□□□□□ -0.2
SNF8-215ENST00000515572 TRERF1Q96PN7 1200 aa13.8□□□□□ -0.2
SNF8-215ENST00000515572 MMP19Q99542 508 aa13.8□□□□□ -0.2
SNF8-215ENST00000515572 MAF1Q9H063 256 aa13.8□□□□□ -0.2
SNF8-215ENST00000515572 RNF146Q9NTX7 359 aa13.8□□□□□ -0.2
SNF8-215ENST00000515572 SLC5A4Q9NY91 659 aa13.8□□□□□ -0.2
SNF8-215ENST00000515572 GJD2Q9UKL4 321 aa13.8□□□□□ -0.2
SNF8-215ENST00000515572 ABCB11O95342 1321 aa13.8□□□□□ -0.2
SNF8-215ENST00000515572 XRCC5P13010 732 aaKnown RBP13.79□□□□□ -0.2
SNF8-215ENST00000515572 ADORA2AP29274 412 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms