RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 MAGEA10P43363 369 aaPredicted RBP16.1■□□□□ 0.17
TCOF1-215ENST00000515516 NOVP48745 357 aa16.1■□□□□ 0.17
TCOF1-215ENST00000515516 RTP1P59025 263 aa16.1■□□□□ 0.17
TCOF1-215ENST00000515516 MAMDC4Q6UXC1 1216 aa16.1■□□□□ 0.17
TCOF1-215ENST00000515516 SLC39A5Q6ZMH5 540 aa16.1■□□□□ 0.17
TCOF1-215ENST00000515516 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.1■□□□□ 0.17
TCOF1-215ENST00000515516 ESR2Q92731 530 aa16.1■□□□□ 0.17
TCOF1-215ENST00000515516 AGBL1Q96MI9 1066 aa16.1■□□□□ 0.17
TCOF1-215ENST00000515516 TTC14Q96N46 770 aa16.1■□□□□ 0.17
TCOF1-215ENST00000515516 TRERF1Q96PN7 1200 aa16.1■□□□□ 0.17
TCOF1-215ENST00000515516 GDF15Q99988 308 aa16.1■□□□□ 0.17
TCOF1-215ENST00000515516 TMEM47Q9BQJ4 181 aa16.1■□□□□ 0.17
TCOF1-215ENST00000515516 UBE2OQ9C0C9 1292 aaKnown RBP16.1■□□□□ 0.17
TCOF1-215ENST00000515516 RNF146Q9NTX7 359 aa16.1■□□□□ 0.17
TCOF1-215ENST00000515516 PRR12Q9ULL5 1215 aa16.1■□□□□ 0.17
TCOF1-215ENST00000515516 ATP11BQ9Y2G3 1177 aa16.1■□□□□ 0.17
TCOF1-215ENST00000515516 NT5C2P49902 561 aa16.09■□□□□ 0.17
TCOF1-215ENST00000515516 CTNNA3Q9UI47 895 aa16.09■□□□□ 0.17
TCOF1-215ENST00000515516 SNAI1O95863 264 aaPredicted RBP16.08■□□□□ 0.16
TCOF1-215ENST00000515516 PGK1P00558 417 aa16.08■□□□□ 0.16
TCOF1-215ENST00000515516 SNAP25P60880 206 aa16.08■□□□□ 0.16
TCOF1-215ENST00000515516 ACVR2BQ13705 512 aa16.08■□□□□ 0.16
TCOF1-215ENST00000515516 IMMTQ16891 758 aaKnown RBP16.08■□□□□ 0.16
TCOF1-215ENST00000515516 CCDC178Q5BJE1 867 aa16.08■□□□□ 0.16
TCOF1-215ENST00000515516 FERMT2Q96AC1 680 aa16.08■□□□□ 0.16
TCOF1-215ENST00000515516 ABHD16BQ9H3Z7 469 aa16.08■□□□□ 0.16
TCOF1-215ENST00000515516 SPC25Q9HBM1 224 aa16.08■□□□□ 0.16
TCOF1-215ENST00000515516 GPCPD1Q9NPB8 672 aa16.08■□□□□ 0.16
TCOF1-215ENST00000515516 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.08■□□□□ 0.16
TCOF1-215ENST00000515516 CCPG1Q9ULG6 757 aa16.08■□□□□ 0.16
TCOF1-215ENST00000515516 IRX6P78412 446 aaPredicted RBP16.07■□□□□ 0.16
TCOF1-215ENST00000515516 MDM2Q00987 491 aaPredicted RBP16.07■□□□□ 0.16
TCOF1-215ENST00000515516 SYDE2Q5VT97 1194 aa16.07■□□□□ 0.16
TCOF1-215ENST00000515516 IQCA1Q86XH1 822 aa16.07■□□□□ 0.16
TCOF1-215ENST00000515516 TBC1D10CQ8IV04 446 aa16.07■□□□□ 0.16
TCOF1-215ENST00000515516 DSCC1Q9BVC3 393 aa16.07■□□□□ 0.16
TCOF1-215ENST00000515516 PNMA2Q9UL42 364 aa16.07■□□□□ 0.16
TCOF1-215ENST00000515516 PHF24Q9UPV7 400 aa16.07■□□□□ 0.16
TCOF1-215ENST00000515516 ZNF536O15090 1300 aa16.07■□□□□ 0.16
TCOF1-215ENST00000515516 FRMPD2Q68DX3 1309 aaPredicted RBP16.07■□□□□ 0.16
TCOF1-215ENST00000515516 CEP290O15078 2479 aa16.06■□□□□ 0.16
TCOF1-215ENST00000515516 ASB14A6NK59 587 aa16.06■□□□□ 0.16
TCOF1-215ENST00000515516 ICAM1P05362 532 aa16.06■□□□□ 0.16
TCOF1-215ENST00000515516 SLC16A2P36021 539 aa16.06■□□□□ 0.16
TCOF1-215ENST00000515516 TTBK2Q6IQ55 1244 aa16.06■□□□□ 0.16
TCOF1-215ENST00000515516 BTNL9Q6UXG8 535 aa16.06■□□□□ 0.16
TCOF1-215ENST00000515516 ARMCX2Q7L311 632 aa16.06■□□□□ 0.16
TCOF1-215ENST00000515516 TDHQ8IZJ6 230 aa16.06■□□□□ 0.16
TCOF1-215ENST00000515516 TSEN34Q9BSV6 310 aaKnown RBP16.06■□□□□ 0.16
TCOF1-215ENST00000515516 A1CFQ9NQ94 594 aaKnown RBP16.06■□□□□ 0.16
TCOF1-215ENST00000515516 PRDM5Q9NQX1 630 aaPredicted RBP16.06■□□□□ 0.16
TCOF1-215ENST00000515516 DUSP11O75319 330 aaKnown RBP16.05■□□□□ 0.16
TCOF1-215ENST00000515516 CNTN2Q02246 1040 aa16.05■□□□□ 0.16
TCOF1-215ENST00000515516 TRIM60Q495X7 471 aa16.05■□□□□ 0.16
TCOF1-215ENST00000515516 NSMFQ6X4W1 530 aa16.05■□□□□ 0.16
TCOF1-215ENST00000515516 NOL8Q76FK4 1167 aaKnown RBP16.05■□□□□ 0.16
TCOF1-215ENST00000515516 RASGRP2Q7LDG7 609 aa16.05■□□□□ 0.16
TCOF1-215ENST00000515516 DGKHQ86XP1 1220 aa16.05■□□□□ 0.16
TCOF1-215ENST00000515516 CCDC144CPQ8IYA2 1237 aa16.05■□□□□ 0.16
TCOF1-215ENST00000515516 FAM133AQ8N9E0 248 aa16.05■□□□□ 0.16
TCOF1-215ENST00000515516 NUP133Q8WUM0 1156 aa16.05■□□□□ 0.16
TCOF1-215ENST00000515516 RUFY2Q8WXA3 655 aa16.05■□□□□ 0.16
TCOF1-215ENST00000515516 ZKSCAN3Q9BRR0 538 aa16.05■□□□□ 0.16
TCOF1-215ENST00000515516 RANBP17Q9H2T7 1088 aaKnown RBP16.05■□□□□ 0.16
TCOF1-215ENST00000515516 NEDD4P46934 1319 aa16.04■□□□□ 0.16
TCOF1-215ENST00000515516 KDM4AO75164 1064 aa16.04■□□□□ 0.16
TCOF1-215ENST00000515516 PDHBP11177 359 aa16.04■□□□□ 0.16
TCOF1-215ENST00000515516 CCDC144BQ3MJ40 725 aa16.04■□□□□ 0.16
TCOF1-215ENST00000515516 GPATCH4Q5T3I0 446 aaKnown RBP16.04■□□□□ 0.16
TCOF1-215ENST00000515516 TTC22Q5TAA0 569 aa16.04■□□□□ 0.16
TCOF1-215ENST00000515516 C1orf53Q5VUE5 145 aa16.04■□□□□ 0.16
TCOF1-215ENST00000515516 LENG1Q96BZ8 264 aaPredicted RBP16.04■□□□□ 0.16
TCOF1-215ENST00000515516 KRT23Q9C075 422 aa16.04■□□□□ 0.16
TCOF1-215ENST00000515516 KAT14Q9H8E8 782 aa16.04■□□□□ 0.16
TCOF1-215ENST00000515516 CNNM2Q9H8M5 875 aa16.04■□□□□ 0.16
TCOF1-215ENST00000515516 CYP39A1Q9NYL5 469 aa16.04■□□□□ 0.16
TCOF1-215ENST00000515516 PARP14Q460N5 1801 aa16.03■□□□□ 0.16
TCOF1-215ENST00000515516 SYNRGQ9UMZ2 1314 aa16.03■□□□□ 0.16
TCOF1-215ENST00000515516 A0A1W2PQ45 241 aaPredicted RBP16.03■□□□□ 0.16
TCOF1-215ENST00000515516 A0A1W2PQY0 241 aa16.03■□□□□ 0.16
TCOF1-215ENST00000515516 SOWAHBA6NEL2 793 aa16.03■□□□□ 0.16
TCOF1-215ENST00000515516 MOXD2PA6NHM9 499 aa16.03■□□□□ 0.16
TCOF1-215ENST00000515516 ADAMTS4O75173 837 aa16.03■□□□□ 0.16
TCOF1-215ENST00000515516 C6orf222P0C671 652 aaPredicted RBP16.03■□□□□ 0.16
TCOF1-215ENST00000515516 PDE4AP27815 886 aa16.03■□□□□ 0.16
TCOF1-215ENST00000515516 ACLYP53396 1101 aa16.03■□□□□ 0.16
TCOF1-215ENST00000515516 ZNF543Q08ER8 600 aa16.03■□□□□ 0.16
TCOF1-215ENST00000515516 SNX17Q15036 470 aa16.03■□□□□ 0.16
TCOF1-215ENST00000515516 MUM1L1Q5H9M0 696 aa16.03■□□□□ 0.16
TCOF1-215ENST00000515516 PCSK9Q8NBP7 692 aaKnown RBP16.03■□□□□ 0.16
TCOF1-215ENST00000515516 VTI1AQ96AJ9 217 aa16.03■□□□□ 0.16
TCOF1-215ENST00000515516 FGD4Q96M96 766 aa16.03■□□□□ 0.16
TCOF1-215ENST00000515516 STARD7Q9NQZ5 370 aa16.03■□□□□ 0.16
TCOF1-215ENST00000515516 MYH4Q9Y623 1939 aa16.02■□□□□ 0.16
TCOF1-215ENST00000515516 B4E1Z4 1266 aa16.02■□□□□ 0.16
TCOF1-215ENST00000515516 TNFAIP2Q03169 654 aa16.02■□□□□ 0.16
TCOF1-215ENST00000515516 TLE2Q04725 743 aa16.02■□□□□ 0.16
TCOF1-215ENST00000515516 KCNA10Q16322 511 aa16.02■□□□□ 0.16
TCOF1-215ENST00000515516 KLHDC9Q8NEP7 349 aa16.02■□□□□ 0.16
TCOF1-215ENST00000515516 GLT1D1Q96MS3 346 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms