RNA–Protein interactions for RNA: ENST00000515332.5

SGMS2-209, Transcript of sphingomyelin synthase 2, human

TSL 3

Gene SGMS2, Length 498 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGMS2-209	ENST00000515332	TCF20	Q9UGU0	1960 aa	Known RBP	29.22	■■■□□ 2.27
SGMS2-209	ENST00000515332	UMODL1	Q5DID0	1318 aa		29.22	■■■□□ 2.27
SGMS2-209	ENST00000515332	CTAGE5	O15320	804 aa		29.22	■■■□□ 2.27
SGMS2-209	ENST00000515332	ADD2	P35612	726 aa		29.22	■■■□□ 2.27
SGMS2-209	ENST00000515332	BEX3	Q00994	111 aa		29.22	■■■□□ 2.27
SGMS2-209	ENST00000515332	BCL11A	Q9H165	835 aa		29.22	■■■□□ 2.27
SGMS2-209	ENST00000515332	MCM3AP	O60318	1980 aa		29.22	■■■□□ 2.27
SGMS2-209	ENST00000515332	ZBED9	Q6R2W3	1325 aa		29.21	■■■□□ 2.27
SGMS2-209	ENST00000515332	BMP1	P13497	986 aa		29.21	■■■□□ 2.27
SGMS2-209	ENST00000515332	RABGGTB	P53611	331 aa		29.21	■■■□□ 2.27
SGMS2-209	ENST00000515332	ARMCX2	Q7L311	632 aa		29.21	■■■□□ 2.27
SGMS2-209	ENST00000515332	HIPK3	Q9H422	1215 aa		29.21	■■■□□ 2.27
SGMS2-209	ENST00000515332	CHGB	P05060	677 aa		29.2	■■■□□ 2.26
SGMS2-209	ENST00000515332	TFF2	Q03403	129 aa		29.2	■■■□□ 2.26
SGMS2-209	ENST00000515332	CTR9	Q6PD62	1173 aa		29.2	■■■□□ 2.26
SGMS2-209	ENST00000515332	ANKRD35	Q8N283	1001 aa		29.2	■■■□□ 2.26
SGMS2-209	ENST00000515332	DDRGK1	Q96HY6	314 aa		29.2	■■■□□ 2.26
SGMS2-209	ENST00000515332	RAVER2	Q9HCJ3	691 aa	Known RBP	29.2	■■■□□ 2.26
SGMS2-209	ENST00000515332	CCL23	P55773	120 aa		29.19	■■■□□ 2.26
SGMS2-209	ENST00000515332	CLASRP	Q8N2M8	674 aa	Known RBP	29.19	■■■□□ 2.26
SGMS2-209	ENST00000515332	PRPF38A	Q8NAV1	312 aa	Known RBP	29.19	■■■□□ 2.26
SGMS2-209	ENST00000515332	C1QTNF1	Q9BXJ1	281 aa		29.19	■■■□□ 2.26
SGMS2-209	ENST00000515332	PAG1	Q9NWQ8	432 aa		29.19	■■■□□ 2.26
SGMS2-209	ENST00000515332	CTDP1	Q9Y5B0	961 aa	Predicted RBP	29.19	■■■□□ 2.26
SGMS2-209	ENST00000515332	SLC4A4	Q9Y6R1	1079 aa		29.19	■■■□□ 2.26
SGMS2-209	ENST00000515332		F5H6K3	240 aa		29.18	■■■□□ 2.26
SGMS2-209	ENST00000515332	ZBED4	O75132	1171 aa		29.18	■■■□□ 2.26
SGMS2-209	ENST00000515332	NDUFB10	O96000	172 aa		29.18	■■■□□ 2.26
SGMS2-209	ENST00000515332	MYOG	P15173	224 aa		29.18	■■■□□ 2.26
SGMS2-209	ENST00000515332	KLRC3	Q07444	240 aa		29.18	■■■□□ 2.26
SGMS2-209	ENST00000515332	HSP90AB4P	Q58FF6	505 aa		29.18	■■■□□ 2.26
SGMS2-209	ENST00000515332	PPP2R2D	Q66LE6	453 aa		29.18	■■■□□ 2.26
SGMS2-209	ENST00000515332	CXCL17	Q6UXB2	119 aa		29.18	■■■□□ 2.26
SGMS2-209	ENST00000515332	CCDC144CP	Q8IYA2	1237 aa		29.18	■■■□□ 2.26
SGMS2-209	ENST00000515332	KATNBL1	Q9H079	304 aa		29.18	■■■□□ 2.26
SGMS2-209	ENST00000515332	ATP2A1	O14983	1001 aa		29.17	■■■□□ 2.26
SGMS2-209	ENST00000515332	IFIT2	P09913	472 aa	Known RBP	29.17	■■■□□ 2.26
SGMS2-209	ENST00000515332	KCNQ1	P51787	676 aa		29.17	■■■□□ 2.26
SGMS2-209	ENST00000515332	SLC43A3	Q8NBI5	491 aa		29.17	■■■□□ 2.26
SGMS2-209	ENST00000515332	KIFC2	Q96AC6	838 aa		29.17	■■■□□ 2.26
SGMS2-209	ENST00000515332	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	29.16	■■■□□ 2.26
SGMS2-209	ENST00000515332	NKX3-2	P78367	333 aa		29.16	■■■□□ 2.26
SGMS2-209	ENST00000515332	NOL8	Q76FK4	1167 aa	Known RBP	29.16	■■■□□ 2.26
SGMS2-209	ENST00000515332	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	29.16	■■■□□ 2.26
SGMS2-209	ENST00000515332	STK11IP	Q8N1F8	1099 aa		29.16	■■■□□ 2.26
SGMS2-209	ENST00000515332	BOLA2	Q9H3K6	86 aa		29.16	■■■□□ 2.26
SGMS2-209	ENST00000515332	ASTN1	O14525	1302 aa		29.16	■■■□□ 2.26
SGMS2-209	ENST00000515332	GREB1L	Q9C091	1923 aa	Predicted RBP	29.16	■■■□□ 2.26
SGMS2-209	ENST00000515332	ITGA7	Q13683	1181 aa		29.15	■■■□□ 2.26
SGMS2-209	ENST00000515332	SKIV2L	Q15477	1246 aa	Known RBP	29.15	■■■□□ 2.26
SGMS2-209	ENST00000515332	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	29.15	■■■□□ 2.26
SGMS2-209	ENST00000515332	NYAP2	Q9P242	653 aa		29.15	■■■□□ 2.26
SGMS2-209	ENST00000515332	SLC4A7	Q9Y6M7	1214 aa		29.15	■■■□□ 2.26
SGMS2-209	ENST00000515332	HOXD11	P31277	338 aa	Predicted RBP	29.14	■■■□□ 2.26
SGMS2-209	ENST00000515332	CNTN2	Q02246	1040 aa		29.14	■■■□□ 2.26
SGMS2-209	ENST00000515332	TNFAIP2	Q03169	654 aa		29.14	■■■□□ 2.26
SGMS2-209	ENST00000515332	KIF1BP	Q96EK5	621 aa		29.14	■■■□□ 2.26
SGMS2-209	ENST00000515332	NOC4L	Q9BVI4	516 aa	Known RBP	29.14	■■■□□ 2.26
SGMS2-209	ENST00000515332	TRPV6	Q9H1D0	765 aa		29.14	■■■□□ 2.26
SGMS2-209	ENST00000515332	WNT8A	Q9H1J5	351 aa		29.14	■■■□□ 2.26
SGMS2-209	ENST00000515332	SLC38A10	Q9HBR0	1119 aa		29.14	■■■□□ 2.26
SGMS2-209	ENST00000515332	FBXO40	Q9UH90	709 aa		29.14	■■■□□ 2.26
SGMS2-209	ENST00000515332	RASA1	P20936	1047 aa		29.13	■■■□□ 2.25
SGMS2-209	ENST00000515332	AAK1	Q2M2I8	961 aa		29.13	■■■□□ 2.25
SGMS2-209	ENST00000515332	CHST13	Q8NET6	341 aa		29.13	■■■□□ 2.25
SGMS2-209	ENST00000515332	HOMER2	Q9NSB8	354 aa		29.13	■■■□□ 2.25
SGMS2-209	ENST00000515332	PCDHA11	Q9Y5I1	949 aa		29.13	■■■□□ 2.25
SGMS2-209	ENST00000515332	GRIN2D	O15399	1336 aa		29.13	■■■□□ 2.25
SGMS2-209	ENST00000515332	ZBBX	A8MT70	800 aa		29.12	■■■□□ 2.25
SGMS2-209	ENST00000515332	CABYR	O75952	493 aa		29.12	■■■□□ 2.25
SGMS2-209	ENST00000515332	PTGS1	P23219	599 aa		29.12	■■■□□ 2.25
SGMS2-209	ENST00000515332	UBE3C	Q15386	1083 aa		29.12	■■■□□ 2.25
SGMS2-209	ENST00000515332	ARPP21	Q9UBL0	812 aa	Predicted RBP	29.12	■■■□□ 2.25
SGMS2-209	ENST00000515332	CLIP2	Q9UDT6	1046 aa		29.12	■■■□□ 2.25
SGMS2-209	ENST00000515332	RFXAP	O00287	272 aa		29.11	■■■□□ 2.25
SGMS2-209	ENST00000515332	B4GALT4	O60513	344 aa		29.11	■■■□□ 2.25
SGMS2-209	ENST00000515332	FSCN1	Q16658	493 aa	Known RBP	29.11	■■■□□ 2.25
SGMS2-209	ENST00000515332	TLK2	Q86UE8	772 aa		29.11	■■■□□ 2.25
SGMS2-209	ENST00000515332	SCLY	Q96I15	445 aa		29.11	■■■□□ 2.25
SGMS2-209	ENST00000515332	PUS7L	Q9H0K6	701 aa	Known RBP	29.11	■■■□□ 2.25
SGMS2-209	ENST00000515332	MKNK2	Q9HBH9	465 aa		29.11	■■■□□ 2.25
SGMS2-209	ENST00000515332	GNE	Q9Y223	722 aa	Known RBP	29.11	■■■□□ 2.25
SGMS2-209	ENST00000515332	ERC2	O15083	957 aa		29.1	■■■□□ 2.25
SGMS2-209	ENST00000515332	RPUSD2	Q8IZ73	545 aa	Known RBP	29.1	■■■□□ 2.25
SGMS2-209	ENST00000515332	VWCE	Q96DN2	955 aa		29.1	■■■□□ 2.25
SGMS2-209	ENST00000515332	ATP2A2	P16615	1042 aa	Known RBP	29.09	■■■□□ 2.25
SGMS2-209	ENST00000515332	PSMC6	P62333	389 aa		29.09	■■■□□ 2.25
SGMS2-209	ENST00000515332	FAM133A	Q8N9E0	248 aa		29.09	■■■□□ 2.25
SGMS2-209	ENST00000515332	LRFN3	Q9BTN0	628 aa		29.09	■■■□□ 2.25
SGMS2-209	ENST00000515332	AP5M1	Q9H0R1	490 aa		29.09	■■■□□ 2.25
SGMS2-209	ENST00000515332	EPHX3	Q9H6B9	360 aa		29.09	■■■□□ 2.25
SGMS2-209	ENST00000515332	FEM1B	Q9UK73	627 aa		29.09	■■■□□ 2.25
SGMS2-209	ENST00000515332	DYNC1LI2	O43237	492 aa	Predicted RBP	29.08	■■■□□ 2.25
SGMS2-209	ENST00000515332	ATP5J	P18859	108 aa		29.08	■■■□□ 2.25
SGMS2-209	ENST00000515332	HAUS7	Q99871	368 aa		29.08	■■■□□ 2.25
SGMS2-209	ENST00000515332	CERS4	Q9HA82	394 aa		29.08	■■■□□ 2.25
SGMS2-209	ENST00000515332	MTCH2	Q9Y6C9	303 aa		29.08	■■■□□ 2.25
SGMS2-209	ENST00000515332	DDX49	Q9Y6V7	483 aa	Known RBP	29.08	■■■□□ 2.25
SGMS2-209	ENST00000515332	TRANK1	O15050	2925 aa		29.08	■■■□□ 2.25
SGMS2-209	ENST00000515332	OAZ1	P54368	228 aa		29.07	■■■□□ 2.24

Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms