RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 EARS2Q5JPH6 523 aaKnown RBP11.66□□□□□ -0.54
SNF8-214ENST00000515174 TTC38Q5R3I4 469 aa11.66□□□□□ -0.54
SNF8-214ENST00000515174 CST9Q5W186 159 aa11.66□□□□□ -0.54
SNF8-214ENST00000515174 WWC2Q6AWC2 1192 aa11.66□□□□□ -0.54
SNF8-214ENST00000515174 USP50Q70EL3 339 aaPredicted RBP11.66□□□□□ -0.54
SNF8-214ENST00000515174 KRT25Q7Z3Z0 450 aa11.66□□□□□ -0.54
SNF8-214ENST00000515174 SIAH1Q8IUQ4 282 aa11.66□□□□□ -0.54
SNF8-214ENST00000515174 TRPM4Q8TD43 1214 aa11.66□□□□□ -0.54
SNF8-214ENST00000515174 GMCL1Q96IK5 515 aa11.66□□□□□ -0.54
SNF8-214ENST00000515174 PYM1Q9BRP8 204 aaKnown RBP11.66□□□□□ -0.54
SNF8-214ENST00000515174 TRIM34Q9BYJ4 488 aa11.66□□□□□ -0.54
SNF8-214ENST00000515174 ZNF408Q9H9D4 720 aa11.66□□□□□ -0.54
SNF8-214ENST00000515174 C6orf50Q9HD87 102 aa11.66□□□□□ -0.54
SNF8-214ENST00000515174 ANO10Q9NW15 660 aa11.66□□□□□ -0.54
SNF8-214ENST00000515174 SEC63Q9UGP8 760 aaKnown RBP11.66□□□□□ -0.54
SNF8-214ENST00000515174 PGAP2Q9UHJ9 254 aa11.66□□□□□ -0.54
SNF8-214ENST00000515174 TUBE1Q9UJT0 475 aa11.66□□□□□ -0.54
SNF8-214ENST00000515174 KCNH3Q9ULD8 1083 aa11.66□□□□□ -0.54
SNF8-214ENST00000515174 TLL2Q9Y6L7 1015 aa11.66□□□□□ -0.54
SNF8-214ENST00000515174 ASTN2O75129 1339 aaPredicted RBP11.65□□□□□ -0.54
SNF8-214ENST00000515174 MYO1BO43795 1136 aa11.65□□□□□ -0.54
SNF8-214ENST00000515174 EEF2P13639 858 aaKnown RBP11.65□□□□□ -0.54
SNF8-214ENST00000515174 STX1AQ16623 288 aa11.65□□□□□ -0.54
SNF8-214ENST00000515174 ABCB5Q2M3G0 1257 aa11.65□□□□□ -0.54
SNF8-214ENST00000515174 RBM26Q5T8P6 1007 aaKnown RBP11.65□□□□□ -0.54
SNF8-214ENST00000515174 TYW1BQ6NUM6 668 aa11.65□□□□□ -0.54
SNF8-214ENST00000515174 BTNL9Q6UXG8 535 aa11.65□□□□□ -0.54
SNF8-214ENST00000515174 ZSCAN29Q8IWY8 852 aaPredicted RBP11.65□□□□□ -0.54
SNF8-214ENST00000515174 CKAP2LQ8IYA6 745 aa11.65□□□□□ -0.54
SNF8-214ENST00000515174 C4orf32Q8N8J7 132 aa11.65□□□□□ -0.54
SNF8-214ENST00000515174 BPIFA3Q9BQP9 254 aa11.65□□□□□ -0.54
SNF8-214ENST00000515174 MYOZ2Q9NPC6 264 aa11.65□□□□□ -0.54
SNF8-214ENST00000515174 HOOK1Q9UJC3 728 aaKnown RBP11.65□□□□□ -0.54
SNF8-214ENST00000515174 PCDHA6Q9UN73 950 aa11.65□□□□□ -0.54
SNF8-214ENST00000515174 PCDHA8Q9Y5H6 950 aa11.65□□□□□ -0.54
SNF8-214ENST00000515174 CCDC194A0A1B0GVG4 234 aa11.64□□□□□ -0.55
SNF8-214ENST00000515174 SMCO2A6NFE2 343 aa11.64□□□□□ -0.55
SNF8-214ENST00000515174 GOLGA8HP0CJ92 632 aa11.64□□□□□ -0.55
SNF8-214ENST00000515174 PRPHP41219 470 aa11.64□□□□□ -0.55
SNF8-214ENST00000515174 MDM2Q00987 491 aaPredicted RBP11.64□□□□□ -0.55
SNF8-214ENST00000515174 KIF4BQ2VIQ3 1234 aa11.64□□□□□ -0.55
SNF8-214ENST00000515174 TBC1D10BQ4KMP7 808 aaPredicted RBP11.64□□□□□ -0.55
SNF8-214ENST00000515174 MCTP2Q6DN12 878 aa11.64□□□□□ -0.55
SNF8-214ENST00000515174 KRBA2Q6ZNG9 492 aa11.64□□□□□ -0.55
SNF8-214ENST00000515174 SAMD7Q7Z3H4 446 aa11.64□□□□□ -0.55
SNF8-214ENST00000515174 CCDC34Q96HJ3 373 aa11.64□□□□□ -0.55
SNF8-214ENST00000515174 CLIC6Q96NY7 704 aa11.64□□□□□ -0.55
SNF8-214ENST00000515174 PIGSQ96S52 555 aa11.64□□□□□ -0.55
SNF8-214ENST00000515174 CSRNP1Q96S65 589 aa11.64□□□□□ -0.55
SNF8-214ENST00000515174 JMJD4Q9H9V9 463 aa11.64□□□□□ -0.55
SNF8-214ENST00000515174 PHIPQ8WWQ0 1821 aa11.63□□□□□ -0.55
SNF8-214ENST00000515174 MPHOSPH10O00566 681 aaKnown RBP11.63□□□□□ -0.55
SNF8-214ENST00000515174 WNT10BO00744 389 aa11.63□□□□□ -0.55
SNF8-214ENST00000515174 ZBTB5O15062 677 aa11.63□□□□□ -0.55
SNF8-214ENST00000515174 PLA2G6O60733 806 aa11.63□□□□□ -0.55
SNF8-214ENST00000515174 LONP1P36776 959 aaKnown RBP11.63□□□□□ -0.55
SNF8-214ENST00000515174 TNNI2P48788 182 aa11.63□□□□□ -0.55
SNF8-214ENST00000515174 ZNF165P49910 485 aa11.63□□□□□ -0.55
SNF8-214ENST00000515174 NAPAP54920 295 aa11.63□□□□□ -0.55
SNF8-214ENST00000515174 TRAF1Q13077 416 aa11.63□□□□□ -0.55
SNF8-214ENST00000515174 PTGDRQ13258 359 aa11.63□□□□□ -0.55
SNF8-214ENST00000515174 SEPT2Q15019 361 aa11.63□□□□□ -0.55
SNF8-214ENST00000515174 IQCB1Q15051 598 aa11.63□□□□□ -0.55
SNF8-214ENST00000515174 NBPF9Q3BBW0 867 aa11.63□□□□□ -0.55
SNF8-214ENST00000515174 TPRNQ4KMQ1 711 aa11.63□□□□□ -0.55
SNF8-214ENST00000515174 ANO6Q4KMQ2 910 aa11.63□□□□□ -0.55
SNF8-214ENST00000515174 CT47A1Q5JQC4 288 aaPredicted RBP11.63□□□□□ -0.55
SNF8-214ENST00000515174 NT5DC1Q5TFE4 455 aa11.63□□□□□ -0.55
SNF8-214ENST00000515174 PIK3AP1Q6ZUJ8 805 aa11.63□□□□□ -0.55
SNF8-214ENST00000515174 HEATR3Q7Z4Q2 680 aa11.63□□□□□ -0.55
SNF8-214ENST00000515174 ADGRF4Q8IZF3 695 aa11.63□□□□□ -0.55
SNF8-214ENST00000515174 RNF214Q8ND24 703 aa11.63□□□□□ -0.55
SNF8-214ENST00000515174 NAT10Q9H0A0 1025 aaKnown RBP11.63□□□□□ -0.55
SNF8-214ENST00000515174 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.63□□□□□ -0.55
SNF8-214ENST00000515174 VEZTQ9HBM0 779 aa11.63□□□□□ -0.55
SNF8-214ENST00000515174 ADARB2Q9NS39 739 aaKnown RBP11.63□□□□□ -0.55
SNF8-214ENST00000515174 GPRC5DQ9NZD1 345 aa11.63□□□□□ -0.55
SNF8-214ENST00000515174 CNOT7Q9UIV1 285 aaKnown RBP11.63□□□□□ -0.55
SNF8-214ENST00000515174 FAM205CA6NFA0 338 aa11.62□□□□□ -0.55
SNF8-214ENST00000515174 TCP10L2B9ZVM9 353 aa11.62□□□□□ -0.55
SNF8-214ENST00000515174 F5H6K3 240 aa11.62□□□□□ -0.55
SNF8-214ENST00000515174 SARSP49591 514 aaKnown RBP11.62□□□□□ -0.55
SNF8-214ENST00000515174 MRPL12P52815 198 aaKnown RBP11.62□□□□□ -0.55
SNF8-214ENST00000515174 NLRP12P59046 1061 aa11.62□□□□□ -0.55
SNF8-214ENST00000515174 ICA1Q05084 483 aa11.62□□□□□ -0.55
SNF8-214ENST00000515174 KLRC3Q07444 240 aa11.62□□□□□ -0.55
SNF8-214ENST00000515174 SEMA3FQ13275 785 aa11.62□□□□□ -0.55
SNF8-214ENST00000515174 TNFAIP1Q13829 316 aa11.62□□□□□ -0.55
SNF8-214ENST00000515174 ZNF174Q15697 407 aa11.62□□□□□ -0.55
SNF8-214ENST00000515174 SLFN13Q68D06 897 aa11.62□□□□□ -0.55
SNF8-214ENST00000515174 SAPCD2Q86UD0 394 aa11.62□□□□□ -0.55
SNF8-214ENST00000515174 LRRC47Q8N1G4 583 aaKnown RBP11.62□□□□□ -0.55
SNF8-214ENST00000515174 SPATA20Q8TB22 786 aa11.62□□□□□ -0.55
SNF8-214ENST00000515174 GPKOWQ92917 476 aaPredicted RBP eCLIP11.62□□□□□ -0.55
SNF8-214ENST00000515174 GLIS2Q9BZE0 524 aaPredicted RBP11.62□□□□□ -0.55
SNF8-214ENST00000515174 UBA5Q9GZZ9 404 aa11.62□□□□□ -0.55
SNF8-214ENST00000515174 CSRNP2Q9H175 543 aa11.62□□□□□ -0.55
SNF8-214ENST00000515174 CBX8Q9HC52 389 aa11.62□□□□□ -0.55
SNF8-214ENST00000515174 RIC8AQ9NPQ8 531 aa11.62□□□□□ -0.55
SNF8-214ENST00000515174 SCAF8Q9UPN6 1271 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms