RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 OAZ1P54368 228 aa8.29□□□□□ -1.08
SMAD1-213ENST00000514778 EVCP57679 992 aa8.29□□□□□ -1.08
SMAD1-213ENST00000514778 HERVK_113P62684 666 aa8.29□□□□□ -1.08
SMAD1-213ENST00000514778 TROAPQ12815 778 aa8.29□□□□□ -1.08
SMAD1-213ENST00000514778 ZYXQ15942 572 aaKnown RBP8.29□□□□□ -1.08
SMAD1-213ENST00000514778 ADCK5Q3MIX3 580 aa8.29□□□□□ -1.08
SMAD1-213ENST00000514778 ASPRV1Q53RT3 343 aa8.29□□□□□ -1.08
SMAD1-213ENST00000514778 CLEC10AQ8IUN9 316 aa8.29□□□□□ -1.08
SMAD1-213ENST00000514778 LRRC47Q8N1G4 583 aaKnown RBP8.29□□□□□ -1.08
SMAD1-213ENST00000514778 NKX2-3Q8TAU0 364 aa8.29□□□□□ -1.08
SMAD1-213ENST00000514778 JAKMIP1Q96N16 626 aaKnown RBP8.29□□□□□ -1.08
SMAD1-213ENST00000514778 P2RX7Q99572 595 aaKnown RBP8.29□□□□□ -1.08
SMAD1-213ENST00000514778 SLF1Q9BQI6 1058 aa8.29□□□□□ -1.08
SMAD1-213ENST00000514778 LZTS2Q9BRK4 669 aa8.29□□□□□ -1.08
SMAD1-213ENST00000514778 ZKSCAN3Q9BRR0 538 aa8.29□□□□□ -1.08
SMAD1-213ENST00000514778 BACH2Q9BYV9 841 aa8.29□□□□□ -1.08
SMAD1-213ENST00000514778 TANGO6Q9C0B7 1094 aa8.29□□□□□ -1.08
SMAD1-213ENST00000514778 MAF1Q9H063 256 aa8.29□□□□□ -1.08
SMAD1-213ENST00000514778 LY9Q9HBG7 655 aa8.29□□□□□ -1.08
SMAD1-213ENST00000514778 RABGAP1Q9Y3P9 1069 aa8.29□□□□□ -1.08
SMAD1-213ENST00000514778 CCDC69A6NI79 296 aa8.28□□□□□ -1.08
SMAD1-213ENST00000514778 GPR25O00155 361 aa8.28□□□□□ -1.08
SMAD1-213ENST00000514778 FLOT1O75955 427 aa8.28□□□□□ -1.08
SMAD1-213ENST00000514778 TBC1D8O95759 1140 aa8.28□□□□□ -1.08
SMAD1-213ENST00000514778 HSPA1AP0DMV8 641 aaKnown RBP8.28□□□□□ -1.08
SMAD1-213ENST00000514778 HSPA1BP0DMV9 641 aaKnown RBP8.28□□□□□ -1.08
SMAD1-213ENST00000514778 BCRP11274 1271 aa8.28□□□□□ -1.08
SMAD1-213ENST00000514778 KIF5BP33176 963 aa8.28□□□□□ -1.08
SMAD1-213ENST00000514778 GNAQP50148 359 aa8.28□□□□□ -1.08
SMAD1-213ENST00000514778 CCNA1P78396 465 aa8.28□□□□□ -1.08
SMAD1-213ENST00000514778 SP3Q02447 781 aa8.28□□□□□ -1.08
SMAD1-213ENST00000514778 ZNF543Q08ER8 600 aa8.28□□□□□ -1.08
SMAD1-213ENST00000514778 TRAF1Q13077 416 aa8.28□□□□□ -1.08
SMAD1-213ENST00000514778 ANKRD1Q15327 319 aa8.28□□□□□ -1.08
SMAD1-213ENST00000514778 FAM110CQ1W6H9 321 aa8.28□□□□□ -1.08
SMAD1-213ENST00000514778 KIAA1755Q5JYT7 1200 aa8.28□□□□□ -1.08
SMAD1-213ENST00000514778 FAM83BQ5T0W9 1011 aa8.28□□□□□ -1.08
SMAD1-213ENST00000514778 SYNE3Q6ZMZ3 975 aa8.28□□□□□ -1.08
SMAD1-213ENST00000514778 SPICE1Q8N0Z3 855 aa8.28□□□□□ -1.08
SMAD1-213ENST00000514778 GPRC5AQ8NFJ5 357 aa8.28□□□□□ -1.08
SMAD1-213ENST00000514778 ERO1AQ96HE7 468 aa8.28□□□□□ -1.08
SMAD1-213ENST00000514778 C22orf23Q9BZE7 217 aa8.28□□□□□ -1.08
SMAD1-213ENST00000514778 PRDM10Q9NQV6 1147 aa8.28□□□□□ -1.08
SMAD1-213ENST00000514778 PPP1R9AQ9ULJ8 1098 aa8.28□□□□□ -1.08
SMAD1-213ENST00000514778 SLC12A7Q9Y666 1083 aa8.28□□□□□ -1.08
SMAD1-213ENST00000514778 PTPRFP10586 1907 aa8.28□□□□□ -1.08
SMAD1-213ENST00000514778 CCDC196A0A1B0GTZ2 297 aa8.27□□□□□ -1.09
SMAD1-213ENST00000514778 PALM3A6NDB9 673 aaPredicted RBP8.27□□□□□ -1.09
SMAD1-213ENST00000514778 GOLGA8CPA6NN73 597 aa8.27□□□□□ -1.09
SMAD1-213ENST00000514778 SPDYE16A6NNV3 312 aaPredicted RBP8.27□□□□□ -1.09
SMAD1-213ENST00000514778 TMEM232C9JQI7 657 aa8.27□□□□□ -1.09
SMAD1-213ENST00000514778 VWA5AO00534 786 aa8.27□□□□□ -1.09
SMAD1-213ENST00000514778 FKTNO75072 461 aa8.27□□□□□ -1.09
SMAD1-213ENST00000514778 ZBED4O75132 1171 aa8.27□□□□□ -1.09
SMAD1-213ENST00000514778 SLC25A27O95847 323 aa8.27□□□□□ -1.09
SMAD1-213ENST00000514778 PARP1P09874 1014 aaKnown RBP8.27□□□□□ -1.09
SMAD1-213ENST00000514778 CYP2C8P10632 490 aa8.27□□□□□ -1.09
SMAD1-213ENST00000514778 CASTP20810 708 aaKnown RBP8.27□□□□□ -1.09
SMAD1-213ENST00000514778 MAPK4P31152 587 aa8.27□□□□□ -1.09
SMAD1-213ENST00000514778 PRMT2P55345 433 aa8.27□□□□□ -1.09
SMAD1-213ENST00000514778 FGD1P98174 961 aa8.27□□□□□ -1.09
SMAD1-213ENST00000514778 KIF22Q14807 665 aa8.27□□□□□ -1.09
SMAD1-213ENST00000514778 GRM4Q14833 912 aa8.27□□□□□ -1.09
SMAD1-213ENST00000514778 ZNF654Q8IZM8 581 aa8.27□□□□□ -1.09
SMAD1-213ENST00000514778 SHCBP1Q8NEM2 672 aa8.27□□□□□ -1.09
SMAD1-213ENST00000514778 CTCFLQ8NI51 663 aaPredicted RBP8.27□□□□□ -1.09
SMAD1-213ENST00000514778 CHMP4CQ96CF2 233 aa8.27□□□□□ -1.09
SMAD1-213ENST00000514778 SLC38A10Q9HBR0 1119 aa8.27□□□□□ -1.09
SMAD1-213ENST00000514778 RBM28Q9NW13 759 aaKnown RBP8.27□□□□□ -1.09
SMAD1-213ENST00000514778 RBPJLQ9UBG7 517 aa8.27□□□□□ -1.09
SMAD1-213ENST00000514778 RABGEF1Q9UJ41 708 aa8.27□□□□□ -1.09
SMAD1-213ENST00000514778 NID2Q14112 1375 aa8.26□□□□□ -1.09
SMAD1-213ENST00000514778 FOXN1O15353 648 aa8.26□□□□□ -1.09
SMAD1-213ENST00000514778 RAD21O60216 631 aa8.26□□□□□ -1.09
SMAD1-213ENST00000514778 HSPA8P11142 646 aaKnown RBP8.26□□□□□ -1.09
SMAD1-213ENST00000514778 LACTBP83111 547 aaPredicted RBP8.26□□□□□ -1.09
SMAD1-213ENST00000514778 DGKZQ13574 1117 aa8.26□□□□□ -1.09
SMAD1-213ENST00000514778 PKN2Q16513 984 aaKnown RBP8.26□□□□□ -1.09
SMAD1-213ENST00000514778 CCDC96Q2M329 555 aa8.26□□□□□ -1.09
SMAD1-213ENST00000514778 TKFCQ3LXA3 575 aa8.26□□□□□ -1.09
SMAD1-213ENST00000514778 NFXL1Q6ZNB6 911 aa8.26□□□□□ -1.09
SMAD1-213ENST00000514778 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.26□□□□□ -1.09
SMAD1-213ENST00000514778 CHST3Q7LGC8 479 aa8.26□□□□□ -1.09
SMAD1-213ENST00000514778 TEX2Q8IWB9 1127 aa8.26□□□□□ -1.09
SMAD1-213ENST00000514778 FANCBQ8NB91 859 aa8.26□□□□□ -1.09
SMAD1-213ENST00000514778 ZNF274Q96GC6 653 aaPredicted RBP8.26□□□□□ -1.09
SMAD1-213ENST00000514778 RANBP17Q9H2T7 1088 aaKnown RBP8.26□□□□□ -1.09
SMAD1-213ENST00000514778 MROH8Q9H579 483 aa8.26□□□□□ -1.09
SMAD1-213ENST00000514778 MAD2L2Q9UI95 211 aa8.26□□□□□ -1.09
SMAD1-213ENST00000514778 KLRF2D3W0D1 207 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 ZBTB43O43298 467 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 STRNO43815 780 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 COL9A1P20849 921 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 HOXD10P28358 340 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 FCGRTP55899 365 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 ERVK-9P63128 1117 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 ERVK-24P63145 666 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 IKQ13123 557 aaPredicted RBP8.25□□□□□ -1.09
SMAD1-213ENST00000514778 RABEP1Q15276 862 aa8.25□□□□□ -1.09
SMAD1-213ENST00000514778 SYDE2Q5VT97 1194 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms