RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 ANKRD35Q8N283 1001 aa12.34□□□□□ -0.43
HMGXB3-205ENST00000514469 CHMP4CQ96CF2 233 aa12.34□□□□□ -0.43
HMGXB3-205ENST00000514469 DDX11Q96FC9 970 aa12.34□□□□□ -0.43
HMGXB3-205ENST00000514469 AGBL1Q96MI9 1066 aa12.34□□□□□ -0.43
HMGXB3-205ENST00000514469 TMEM47Q9BQJ4 181 aa12.34□□□□□ -0.43
HMGXB3-205ENST00000514469 DSCC1Q9BVC3 393 aa12.34□□□□□ -0.43
HMGXB3-205ENST00000514469 RNF41Q9H4P4 317 aaPredicted RBP12.34□□□□□ -0.43
HMGXB3-205ENST00000514469 ACAD9Q9H845 621 aa12.34□□□□□ -0.43
HMGXB3-205ENST00000514469 HOMER2Q9NSB8 354 aa12.34□□□□□ -0.43
HMGXB3-205ENST00000514469 PRR12Q9ULL5 1215 aa12.34□□□□□ -0.43
HMGXB3-205ENST00000514469 CNPY2Q9Y2B0 182 aa12.34□□□□□ -0.43
HMGXB3-205ENST00000514469 LAMA3Q16787 3333 aa12.33□□□□□ -0.44
HMGXB3-205ENST00000514469 SNAI1O95863 264 aaPredicted RBP12.33□□□□□ -0.44
HMGXB3-205ENST00000514469 RARBP10826 455 aa12.33□□□□□ -0.44
HMGXB3-205ENST00000514469 MAGEA10P43363 369 aaPredicted RBP12.33□□□□□ -0.44
HMGXB3-205ENST00000514469 NT5C2P49902 561 aa12.33□□□□□ -0.44
HMGXB3-205ENST00000514469 IRX6P78412 446 aaPredicted RBP12.33□□□□□ -0.44
HMGXB3-205ENST00000514469 SNX17Q15036 470 aa12.33□□□□□ -0.44
HMGXB3-205ENST00000514469 TTC22Q5TAA0 569 aa12.33□□□□□ -0.44
HMGXB3-205ENST00000514469 BTNL9Q6UXG8 535 aa12.33□□□□□ -0.44
HMGXB3-205ENST00000514469 IL25Q9H293 177 aa12.33□□□□□ -0.44
HMGXB3-205ENST00000514469 RANBP17Q9H2T7 1088 aaKnown RBP12.33□□□□□ -0.44
HMGXB3-205ENST00000514469 A1CFQ9NQ94 594 aaKnown RBP12.33□□□□□ -0.44
HMGXB3-205ENST00000514469 XPNPEP3Q9NQH7 507 aa12.33□□□□□ -0.44
HMGXB3-205ENST00000514469 RNF146Q9NTX7 359 aa12.33□□□□□ -0.44
HMGXB3-205ENST00000514469 ZNFX1Q9P2E3 1918 aaKnown RBP12.33□□□□□ -0.44
HMGXB3-205ENST00000514469 ZNF213O14771 459 aa12.32□□□□□ -0.44
HMGXB3-205ENST00000514469 ADAMTS4O75173 837 aa12.32□□□□□ -0.44
HMGXB3-205ENST00000514469 ICAM1P05362 532 aa12.32□□□□□ -0.44
HMGXB3-205ENST00000514469 SNHG28P0DPA3 235 aa12.32□□□□□ -0.44
HMGXB3-205ENST00000514469 PDHBP11177 359 aa12.32□□□□□ -0.44
HMGXB3-205ENST00000514469 ATN1P54259 1190 aaPredicted RBP12.32□□□□□ -0.44
HMGXB3-205ENST00000514469 RTP1P59025 263 aa12.32□□□□□ -0.44
HMGXB3-205ENST00000514469 CCDC174Q6PII3 467 aa12.32□□□□□ -0.44
HMGXB3-205ENST00000514469 FAM133AQ8N9E0 248 aa12.32□□□□□ -0.44
HMGXB3-205ENST00000514469 ESR2Q92731 530 aa12.32□□□□□ -0.44
HMGXB3-205ENST00000514469 LENG1Q96BZ8 264 aaPredicted RBP12.32□□□□□ -0.44
HMGXB3-205ENST00000514469 TTC14Q96N46 770 aa12.32□□□□□ -0.44
HMGXB3-205ENST00000514469 PCDH10Q9P2E7 1040 aa12.32□□□□□ -0.44
HMGXB3-205ENST00000514469 PHF24Q9UPV7 400 aa12.32□□□□□ -0.44
HMGXB3-205ENST00000514469 MTMR7Q9Y216 660 aa12.32□□□□□ -0.44
HMGXB3-205ENST00000514469 RAD50Q92878 1312 aa12.32□□□□□ -0.44
HMGXB3-205ENST00000514469 SYNRGQ9UMZ2 1314 aa12.32□□□□□ -0.44
HMGXB3-205ENST00000514469 LTBP2Q14767 1821 aa12.32□□□□□ -0.44
HMGXB3-205ENST00000514469 ALAS1P13196 640 aa12.31□□□□□ -0.44
HMGXB3-205ENST00000514469 ADCYAP1R1P41586 468 aa12.31□□□□□ -0.44
HMGXB3-205ENST00000514469 SNAP25P60880 206 aa12.31□□□□□ -0.44
HMGXB3-205ENST00000514469 CNTN2Q02246 1040 aa12.31□□□□□ -0.44
HMGXB3-205ENST00000514469 MUM1L1Q5H9M0 696 aa12.31□□□□□ -0.44
HMGXB3-205ENST00000514469 SYDE2Q5VT97 1194 aa12.31□□□□□ -0.44
HMGXB3-205ENST00000514469 C1orf53Q5VUE5 145 aa12.31□□□□□ -0.44
HMGXB3-205ENST00000514469 TTBK2Q6IQ55 1244 aa12.31□□□□□ -0.44
HMGXB3-205ENST00000514469 SLC39A5Q6ZMH5 540 aa12.31□□□□□ -0.44
HMGXB3-205ENST00000514469 ARMCX2Q7L311 632 aa12.31□□□□□ -0.44
HMGXB3-205ENST00000514469 RNF180Q86T96 592 aa12.31□□□□□ -0.44
HMGXB3-205ENST00000514469 TRERF1Q96PN7 1200 aa12.31□□□□□ -0.44
HMGXB3-205ENST00000514469 KATNBL1Q9H079 304 aa12.31□□□□□ -0.44
HMGXB3-205ENST00000514469 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.31□□□□□ -0.44
HMGXB3-205ENST00000514469 ZHX1Q9UKY1 873 aaPredicted RBP12.31□□□□□ -0.44
HMGXB3-205ENST00000514469 FAM184BQ9ULE4 1060 aa12.31□□□□□ -0.44
HMGXB3-205ENST00000514469 ASTN1O14525 1302 aa12.31□□□□□ -0.44
HMGXB3-205ENST00000514469 FRMPD2Q68DX3 1309 aaPredicted RBP12.31□□□□□ -0.44
HMGXB3-205ENST00000514469 SOWAHBA6NEL2 793 aa12.3□□□□□ -0.44
HMGXB3-205ENST00000514469 POTEB2H3BUK9 544 aa12.3□□□□□ -0.44
HMGXB3-205ENST00000514469 ADCY6O43306 1168 aa12.3□□□□□ -0.44
HMGXB3-205ENST00000514469 PGK1P00558 417 aa12.3□□□□□ -0.44
HMGXB3-205ENST00000514469 MYCNP04198 464 aaPredicted RBP12.3□□□□□ -0.44
HMGXB3-205ENST00000514469 SLC16A2P36021 539 aa12.3□□□□□ -0.44
HMGXB3-205ENST00000514469 ZNF543Q08ER8 600 aa12.3□□□□□ -0.44
HMGXB3-205ENST00000514469 ACVR2BQ13705 512 aa12.3□□□□□ -0.44
HMGXB3-205ENST00000514469 IMMTQ16891 758 aaKnown RBP12.3□□□□□ -0.44
HMGXB3-205ENST00000514469 DGKHQ86XP1 1220 aa12.3□□□□□ -0.44
HMGXB3-205ENST00000514469 CCDC144CPQ8IYA2 1237 aa12.3□□□□□ -0.44
HMGXB3-205ENST00000514469 ABHD16BQ9H3Z7 469 aa12.3□□□□□ -0.44
HMGXB3-205ENST00000514469 CYP39A1Q9NYL5 469 aa12.3□□□□□ -0.44
HMGXB3-205ENST00000514469 CTNNA3Q9UI47 895 aa12.3□□□□□ -0.44
HMGXB3-205ENST00000514469 CCPG1Q9ULG6 757 aa12.3□□□□□ -0.44
HMGXB3-205ENST00000514469 ATP11BQ9Y2G3 1177 aa12.3□□□□□ -0.44
HMGXB3-205ENST00000514469 TRIOBPQ9H2D6 2365 aa12.29□□□□□ -0.44
HMGXB3-205ENST00000514469 LCTP09848 1927 aa12.29□□□□□ -0.44
HMGXB3-205ENST00000514469 A0A1W2PQ45 241 aaPredicted RBP12.29□□□□□ -0.44
HMGXB3-205ENST00000514469 A0A1W2PQY0 241 aa12.29□□□□□ -0.44
HMGXB3-205ENST00000514469 SOX1O00570 391 aaPredicted RBP12.29□□□□□ -0.44
HMGXB3-205ENST00000514469 KDM4AO75164 1064 aa12.29□□□□□ -0.44
HMGXB3-205ENST00000514469 DUSP11O75319 330 aaKnown RBP12.29□□□□□ -0.44
HMGXB3-205ENST00000514469 CST5P28325 142 aaPredicted RBP12.29□□□□□ -0.44
HMGXB3-205ENST00000514469 TRIM60Q495X7 471 aa12.29□□□□□ -0.44
HMGXB3-205ENST00000514469 CCDC178Q5BJE1 867 aa12.29□□□□□ -0.44
HMGXB3-205ENST00000514469 CCSAPQ6IQ19 270 aaPredicted RBP12.29□□□□□ -0.44
HMGXB3-205ENST00000514469 TDHQ8IZJ6 230 aa12.29□□□□□ -0.44
HMGXB3-205ENST00000514469 KLHDC9Q8NEP7 349 aa12.29□□□□□ -0.44
HMGXB3-205ENST00000514469 FERMT2Q96AC1 680 aa12.29□□□□□ -0.44
HMGXB3-205ENST00000514469 ZKSCAN3Q9BRR0 538 aa12.29□□□□□ -0.44
HMGXB3-205ENST00000514469 TSEN34Q9BSV6 310 aaKnown RBP12.29□□□□□ -0.44
HMGXB3-205ENST00000514469 GPCPD1Q9NPB8 672 aa12.29□□□□□ -0.44
HMGXB3-205ENST00000514469 ASB14A6NK59 587 aa12.28□□□□□ -0.44
HMGXB3-205ENST00000514469 B4E1Z4 1266 aa12.28□□□□□ -0.44
HMGXB3-205ENST00000514469 MDM2Q00987 491 aaPredicted RBP12.28□□□□□ -0.44
HMGXB3-205ENST00000514469 CCDC144BQ3MJ40 725 aa12.28□□□□□ -0.44
HMGXB3-205ENST00000514469 GPATCH4Q5T3I0 446 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms