RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 FRMPD3Q5JV73 1810 aa9.6□□□□□ -0.87
NEDD4-210ENST00000513957 WDR19Q8NEZ3 1342 aa9.59□□□□□ -0.87
NEDD4-210ENST00000513957 SLC27A2O14975 620 aa9.59□□□□□ -0.87
NEDD4-210ENST00000513957 HOXC6P09630 235 aa9.59□□□□□ -0.87
NEDD4-210ENST00000513957 GRK4P32298 578 aa9.59□□□□□ -0.87
NEDD4-210ENST00000513957 UBXN2AP68543 259 aa9.59□□□□□ -0.87
NEDD4-210ENST00000513957 GRB14Q14449 540 aa9.59□□□□□ -0.87
NEDD4-210ENST00000513957 Q3C1V9 767 aa9.59□□□□□ -0.87
NEDD4-210ENST00000513957 TKFCQ3LXA3 575 aa9.59□□□□□ -0.87
NEDD4-210ENST00000513957 ASPRV1Q53RT3 343 aa9.59□□□□□ -0.87
NEDD4-210ENST00000513957 MORN1Q5T089 497 aa9.59□□□□□ -0.87
NEDD4-210ENST00000513957 IFIT1BQ5T764 474 aaKnown RBP9.59□□□□□ -0.87
NEDD4-210ENST00000513957 CREB3L3Q68CJ9 461 aa9.59□□□□□ -0.87
NEDD4-210ENST00000513957 POTEEQ6S8J3 1075 aa9.59□□□□□ -0.87
NEDD4-210ENST00000513957 SKAP1Q86WV1 359 aa9.59□□□□□ -0.87
NEDD4-210ENST00000513957 TMTC2Q8N394 836 aa9.59□□□□□ -0.87
NEDD4-210ENST00000513957 ENAHQ8N8S7 591 aaPredicted RBP9.59□□□□□ -0.87
NEDD4-210ENST00000513957 PNMA1Q8ND90 353 aa9.59□□□□□ -0.87
NEDD4-210ENST00000513957 ZNF333Q96JL9 665 aa9.59□□□□□ -0.87
NEDD4-210ENST00000513957 TMEM87BQ96K49 555 aa9.59□□□□□ -0.87
NEDD4-210ENST00000513957 APBA2Q99767 749 aa9.59□□□□□ -0.87
NEDD4-210ENST00000513957 MOV10L1Q9BXT6 1211 aaKnown RBP9.59□□□□□ -0.87
NEDD4-210ENST00000513957 MAF1Q9H063 256 aa9.59□□□□□ -0.87
NEDD4-210ENST00000513957 PORCNQ9H237 461 aa9.59□□□□□ -0.87
NEDD4-210ENST00000513957 FBXO28Q9NVF7 368 aa9.59□□□□□ -0.87
NEDD4-210ENST00000513957 FBXO40Q9UH90 709 aa9.59□□□□□ -0.87
NEDD4-210ENST00000513957 GJD2Q9UKL4 321 aa9.59□□□□□ -0.87
NEDD4-210ENST00000513957 CTDP1Q9Y5B0 961 aaPredicted RBP9.59□□□□□ -0.87
NEDD4-210ENST00000513957 TMEM232C9JQI7 657 aa9.58□□□□□ -0.88
NEDD4-210ENST00000513957 HMGCRP04035 888 aa9.58□□□□□ -0.88
NEDD4-210ENST00000513957 HMGB1P09429 215 aaKnown RBP9.58□□□□□ -0.88
NEDD4-210ENST00000513957 ERCC3P19447 782 aa9.58□□□□□ -0.88
NEDD4-210ENST00000513957 PTPREP23469 700 aa9.58□□□□□ -0.88
NEDD4-210ENST00000513957 MCCP23508 829 aa9.58□□□□□ -0.88
NEDD4-210ENST00000513957 MCM5P33992 734 aa9.58□□□□□ -0.88
NEDD4-210ENST00000513957 STAT3P40763 770 aa9.58□□□□□ -0.88
NEDD4-210ENST00000513957 ZNF543Q08ER8 600 aa9.58□□□□□ -0.88
NEDD4-210ENST00000513957 IKQ13123 557 aaPredicted RBP9.58□□□□□ -0.88
NEDD4-210ENST00000513957 MAP2K5Q13163 448 aa9.58□□□□□ -0.88
NEDD4-210ENST00000513957 TMEM132BQ14DG7 1078 aa9.58□□□□□ -0.88
NEDD4-210ENST00000513957 SEC23AQ15436 765 aa9.58□□□□□ -0.88
NEDD4-210ENST00000513957 CCDC96Q2M329 555 aa9.58□□□□□ -0.88
NEDD4-210ENST00000513957 TMCO4Q5TGY1 634 aa9.58□□□□□ -0.88
NEDD4-210ENST00000513957 MB21D2Q8IYB1 491 aaPredicted RBP9.58□□□□□ -0.88
NEDD4-210ENST00000513957 ZNF579Q8NAF0 562 aaKnown RBP9.58□□□□□ -0.88
NEDD4-210ENST00000513957 CHST13Q8NET6 341 aa9.58□□□□□ -0.88
NEDD4-210ENST00000513957 USP6NLQ92738 828 aa9.58□□□□□ -0.88
NEDD4-210ENST00000513957 KIFC2Q96AC6 838 aa9.58□□□□□ -0.88
NEDD4-210ENST00000513957 CCDC97Q96F63 343 aaPredicted RBP9.58□□□□□ -0.88
NEDD4-210ENST00000513957 MAP3K14Q99558 947 aa9.58□□□□□ -0.88
NEDD4-210ENST00000513957 NUP88Q99567 741 aaPredicted RBP9.58□□□□□ -0.88
NEDD4-210ENST00000513957 PCDHB8Q9UN66 801 aa9.58□□□□□ -0.88
NEDD4-210ENST00000513957 PCDHB13Q9Y5F0 798 aa9.58□□□□□ -0.88
NEDD4-210ENST00000513957 BRCA2P51587 3418 aa9.57□□□□□ -0.88
NEDD4-210ENST00000513957 IFIT3O14879 490 aaKnown RBP9.57□□□□□ -0.88
NEDD4-210ENST00000513957 ADCY3O60266 1144 aa9.57□□□□□ -0.88
NEDD4-210ENST00000513957 FCER1AP12319 257 aa9.57□□□□□ -0.88
NEDD4-210ENST00000513957 PLS1Q14651 629 aa9.57□□□□□ -0.88
NEDD4-210ENST00000513957 WTAPQ15007 396 aa9.57□□□□□ -0.88
NEDD4-210ENST00000513957 AMHR2Q16671 573 aa9.57□□□□□ -0.88
NEDD4-210ENST00000513957 STOX1Q6ZVD7 989 aa9.57□□□□□ -0.88
NEDD4-210ENST00000513957 NKX2-3Q8TAU0 364 aa9.57□□□□□ -0.88
NEDD4-210ENST00000513957 KCNB2Q92953 911 aa9.57□□□□□ -0.88
NEDD4-210ENST00000513957 ZKSCAN3Q9BRR0 538 aa9.57□□□□□ -0.88
NEDD4-210ENST00000513957 RANBP17Q9H2T7 1088 aaKnown RBP9.57□□□□□ -0.88
NEDD4-210ENST00000513957 PRR12Q9ULL5 1215 aa9.57□□□□□ -0.88
NEDD4-210ENST00000513957 ISY1Q9ULR0 285 aaKnown RBP9.57□□□□□ -0.88
NEDD4-210ENST00000513957 GABRQQ9UN88 632 aa9.57□□□□□ -0.88
NEDD4-210ENST00000513957 DIS3Q9Y2L1 958 aaKnown RBP9.57□□□□□ -0.88
NEDD4-210ENST00000513957 CCDC85CA6NKD9 419 aa9.56□□□□□ -0.88
NEDD4-210ENST00000513957 DDAH1O94760 285 aa9.56□□□□□ -0.88
NEDD4-210ENST00000513957 ICAM1P05362 532 aa9.56□□□□□ -0.88
NEDD4-210ENST00000513957 PARP1P09874 1014 aaKnown RBP9.56□□□□□ -0.88
NEDD4-210ENST00000513957 HSPA4P34932 840 aa9.56□□□□□ -0.88
NEDD4-210ENST00000513957 LIFRP42702 1097 aa9.56□□□□□ -0.88
NEDD4-210ENST00000513957 TRAF1Q13077 416 aa9.56□□□□□ -0.88
NEDD4-210ENST00000513957 KCTD2Q14681 263 aa9.56□□□□□ -0.88
NEDD4-210ENST00000513957 SYDE2Q5VT97 1194 aa9.56□□□□□ -0.88
NEDD4-210ENST00000513957 WDR78Q5VTH9 848 aa9.56□□□□□ -0.88
NEDD4-210ENST00000513957 OLFML2BQ68BL8 750 aa9.56□□□□□ -0.88
NEDD4-210ENST00000513957 SNRNP48Q6IEG0 339 aaKnown RBP9.56□□□□□ -0.88
NEDD4-210ENST00000513957 KCTD1Q719H9 257 aa9.56□□□□□ -0.88
NEDD4-210ENST00000513957 CYB5R4Q7L1T6 521 aa9.56□□□□□ -0.88
NEDD4-210ENST00000513957 CATIPQ7Z7H3 387 aa9.56□□□□□ -0.88
NEDD4-210ENST00000513957 NCAPG2Q86XI2 1143 aa9.56□□□□□ -0.88
NEDD4-210ENST00000513957 MSL3Q8N5Y2 521 aaKnown RBP9.56□□□□□ -0.88
NEDD4-210ENST00000513957 RGS22Q8NE09 1264 aa9.56□□□□□ -0.88
NEDD4-210ENST00000513957 PCMTD1Q96MG8 357 aaPredicted RBP9.56□□□□□ -0.88
NEDD4-210ENST00000513957 TMEM106CQ9BVX2 250 aa9.56□□□□□ -0.88
NEDD4-210ENST00000513957 KIAA0100Q14667 2235 aaKnown RBP9.56□□□□□ -0.88
NEDD4-210ENST00000513957 PFASO15067 1338 aa9.56□□□□□ -0.88
NEDD4-210ENST00000513957 SMCHD1A6NHR9 2005 aa9.55□□□□□ -0.88
NEDD4-210ENST00000513957 LCTP09848 1927 aa9.55□□□□□ -0.88
NEDD4-210ENST00000513957 LOC102724159A0A0B4J2E5 919 aa9.55□□□□□ -0.88
NEDD4-210ENST00000513957 INHAP05111 366 aa9.55□□□□□ -0.88
NEDD4-210ENST00000513957 CALM1P0DP23 149 aa9.55□□□□□ -0.88
NEDD4-210ENST00000513957 CALM2P0DP24 149 aa9.55□□□□□ -0.88
NEDD4-210ENST00000513957 CALM3P0DP25 149 aa9.55□□□□□ -0.88
NEDD4-210ENST00000513957 PSMA5P28066 241 aa9.55□□□□□ -0.88
NEDD4-210ENST00000513957 ADORA2AP29274 412 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms