RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 GH2P01242 217 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 SLC1A4P43007 532 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 CLK2P49760 499 aaKnown RBP9.53□□□□□ -0.88
RNF4-220ENST00000513578 MRPL12P52815 198 aaKnown RBP9.53□□□□□ -0.88
RNF4-220ENST00000513578 JAG1P78504 1218 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 GRIN1Q05586 938 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 ZNF174Q15697 407 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 CCDC96Q2M329 555 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 LONRF3Q496Y0 759 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 CT47A1Q5JQC4 288 aaPredicted RBP9.53□□□□□ -0.88
RNF4-220ENST00000513578 SARM1Q6SZW1 724 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 SH3RF1Q7Z6J0 888 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 HOMER1Q86YM7 354 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 CLEC10AQ8IUN9 316 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 CEP57L1Q8IYX8 460 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 REXO1Q8N1G1 1221 aaKnown RBP9.53□□□□□ -0.88
RNF4-220ENST00000513578 TRIML1Q8N9V2 468 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 CNNM3Q8NE01 707 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 SPATA20Q8TB22 786 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 PIBF1Q8WXW3 757 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 NAP1L4Q99733 375 aaKnown RBP9.53□□□□□ -0.88
RNF4-220ENST00000513578 DNAJC25Q9H1X3 360 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 CPVLQ9H3G5 476 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 ARHGEF10LQ9HCE6 1279 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 VAT1LQ9HCJ6 419 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 GPCPD1Q9NPB8 672 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 ZBTB21Q9ULJ3 1066 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 MTMR7Q9Y216 660 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 DOCK1Q14185 1865 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 ACTN4O43707 911 aaKnown RBP9.52□□□□□ -0.89
RNF4-220ENST00000513578 ABCB7O75027 752 aa9.52□□□□□ -0.89
RNF4-220ENST00000513578 GDF11O95390 407 aa9.52□□□□□ -0.89
RNF4-220ENST00000513578 NDUFB10O96000 172 aa9.52□□□□□ -0.89
RNF4-220ENST00000513578 SLFN14P0C7P3 912 aa9.52□□□□□ -0.89
RNF4-220ENST00000513578 SLURP2P0DP57 97 aa9.52□□□□□ -0.89
RNF4-220ENST00000513578 BMP3P12645 472 aa9.52□□□□□ -0.89
RNF4-220ENST00000513578 ATP2B1P20020 1258 aa9.52□□□□□ -0.89
RNF4-220ENST00000513578 CAP2P40123 477 aa9.52□□□□□ -0.89
RNF4-220ENST00000513578 SARSP49591 514 aaKnown RBP9.52□□□□□ -0.89
RNF4-220ENST00000513578 ADCY7P51828 1080 aa9.52□□□□□ -0.89
RNF4-220ENST00000513578 SEMA3FQ13275 785 aa9.52□□□□□ -0.89
RNF4-220ENST00000513578 NBPF9Q3BBW0 867 aa9.52□□□□□ -0.89
RNF4-220ENST00000513578 TTBK2Q6IQ55 1244 aa9.52□□□□□ -0.89
RNF4-220ENST00000513578 NEK8Q86SG6 692 aa9.52□□□□□ -0.89
RNF4-220ENST00000513578 TRIM44Q96DX7 344 aaPredicted RBP9.52□□□□□ -0.89
RNF4-220ENST00000513578 AK8Q96MA6 479 aa9.52□□□□□ -0.89
RNF4-220ENST00000513578 CCSER1Q9C0I3 900 aa9.52□□□□□ -0.89
RNF4-220ENST00000513578 SH2D4AQ9H788 454 aa9.52□□□□□ -0.89
RNF4-220ENST00000513578 USP17L10C9JJH3 530 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 IKBKBO14920 756 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 POLR2DO15514 142 aaKnown RBP9.51□□□□□ -0.89
RNF4-220ENST00000513578 PPP1R11O60927 126 aaPredicted RBP9.51□□□□□ -0.89
RNF4-220ENST00000513578 ADCY5O95622 1261 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 ASNSP08243 561 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 MCM7P33993 719 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 GMPSP49915 693 aaPredicted RBP9.51□□□□□ -0.89
RNF4-220ENST00000513578 ATP2B2Q01814 1243 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 POSTNQ15063 836 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 ZRSR1Q15695 479 aaKnown RBP9.51□□□□□ -0.89
RNF4-220ENST00000513578 E2F4Q16254 413 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 IL17AQ16552 155 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 INF2Q27J81 1249 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 QRICH1Q2TAL8 776 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 SYDE2Q5VT97 1194 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 PPP4R3AQ6IN85 833 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 MOXD1Q6UVY6 613 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 DTHD1Q6ZMT9 781 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 C11orf57Q6ZUT1 292 aaPredicted RBP9.51□□□□□ -0.89
RNF4-220ENST00000513578 KCTD1Q719H9 257 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.51□□□□□ -0.89
RNF4-220ENST00000513578 FAM43AQ8N2R8 423 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 RASGRP4Q8TDF6 673 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 SYMPKQ92797 1274 aaKnown RBP9.51□□□□□ -0.89
RNF4-220ENST00000513578 CUL5Q93034 780 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 COA7Q96BR5 231 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 HOOK2Q96ED9 719 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 TEPSINQ96N21 525 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 VEZTQ9HBM0 779 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 GOPCQ9HD26 462 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 RTN4Q9NQC3 1192 aaKnown RBP9.51□□□□□ -0.89
RNF4-220ENST00000513578 CCDC39Q9UFE4 941 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 SERTAD1Q9UHV2 236 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 PARP14Q460N5 1801 aa9.51□□□□□ -0.89
RNF4-220ENST00000513578 PHIPQ8WWQ0 1821 aa9.5□□□□□ -0.89
RNF4-220ENST00000513578 A0A1W2PRG0 241 aa9.5□□□□□ -0.89
RNF4-220ENST00000513578 VWA3AA6NCI4 1184 aa9.5□□□□□ -0.89
RNF4-220ENST00000513578 SMTNL1A8MU46 457 aa9.5□□□□□ -0.89
RNF4-220ENST00000513578 PHF20L1A8MW92 1017 aa9.5□□□□□ -0.89
RNF4-220ENST00000513578 SLC26A4O43511 780 aa9.5□□□□□ -0.89
RNF4-220ENST00000513578 MYL1P05976 194 aa9.5□□□□□ -0.89
RNF4-220ENST00000513578 TPM3P06753 285 aa9.5□□□□□ -0.89
RNF4-220ENST00000513578 GCFC2P16383 781 aaKnown RBP9.5□□□□□ -0.89
RNF4-220ENST00000513578 CDC25BP30305 580 aa9.5□□□□□ -0.89
RNF4-220ENST00000513578 AP3B2Q13367 1082 aa9.5□□□□□ -0.89
RNF4-220ENST00000513578 RASA3Q14644 834 aa9.5□□□□□ -0.89
RNF4-220ENST00000513578 CDC37Q16543 378 aaPredicted RBP9.5□□□□□ -0.89
RNF4-220ENST00000513578 SHROOM1Q2M3G4 852 aaPredicted RBP9.5□□□□□ -0.89
RNF4-220ENST00000513578 USP49Q70CQ1 688 aa9.5□□□□□ -0.89
RNF4-220ENST00000513578 LUZP1Q86V48 1076 aa9.5□□□□□ -0.89
RNF4-220ENST00000513578 FAM160B2Q86V87 743 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms