RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 ACRP10323 421 aa11.54□□□□□ -0.56
TCOF1-212ENST00000513538 GJA9P57773 515 aa11.54□□□□□ -0.56
TCOF1-212ENST00000513538 C20orf194Q5TEA3 1177 aa11.54□□□□□ -0.56
TCOF1-212ENST00000513538 LRRC47Q8N1G4 583 aaKnown RBP11.54□□□□□ -0.56
TCOF1-212ENST00000513538 PRPF38AQ8NAV1 312 aaKnown RBP11.54□□□□□ -0.56
TCOF1-212ENST00000513538 KIFC2Q96AC6 838 aa11.54□□□□□ -0.56
TCOF1-212ENST00000513538 TIFAQ96CG3 184 aa11.54□□□□□ -0.56
TCOF1-212ENST00000513538 CEP95Q96GE4 821 aa11.54□□□□□ -0.56
TCOF1-212ENST00000513538 PBX4Q9BYU1 374 aa11.54□□□□□ -0.56
TCOF1-212ENST00000513538 PPP1R12CQ9BZL4 782 aa11.54□□□□□ -0.56
TCOF1-212ENST00000513538 CLIP2Q9UDT6 1046 aa11.54□□□□□ -0.56
TCOF1-212ENST00000513538 ASTN1O14525 1302 aa11.54□□□□□ -0.56
TCOF1-212ENST00000513538 ELP1O95163 1332 aa11.54□□□□□ -0.56
TCOF1-212ENST00000513538 PLIN4Q96Q06 1357 aa11.54□□□□□ -0.56
TCOF1-212ENST00000513538 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.53□□□□□ -0.56
TCOF1-212ENST00000513538 ARVCFO00192 962 aa11.53□□□□□ -0.56
TCOF1-212ENST00000513538 GPAA1O43292 621 aa11.53□□□□□ -0.56
TCOF1-212ENST00000513538 MS4A1P11836 297 aa11.53□□□□□ -0.56
TCOF1-212ENST00000513538 CSF2RAP15509 400 aa11.53□□□□□ -0.56
TCOF1-212ENST00000513538 BEX3Q00994 111 aa11.53□□□□□ -0.56
TCOF1-212ENST00000513538 CNTN2Q02246 1040 aa11.53□□□□□ -0.56
TCOF1-212ENST00000513538 ZSCAN25Q6NSZ9 544 aa11.53□□□□□ -0.56
TCOF1-212ENST00000513538 GIMAP6Q6P9H5 292 aa11.53□□□□□ -0.56
TCOF1-212ENST00000513538 RASGRP2Q7LDG7 609 aa11.53□□□□□ -0.56
TCOF1-212ENST00000513538 CCDC144CPQ8IYA2 1237 aa11.53□□□□□ -0.56
TCOF1-212ENST00000513538 KBTBD3Q8NAB2 608 aa11.53□□□□□ -0.56
TCOF1-212ENST00000513538 APPBP2Q92624 585 aa11.53□□□□□ -0.56
TCOF1-212ENST00000513538 GLT1D1Q96MS3 346 aa11.53□□□□□ -0.56
TCOF1-212ENST00000513538 LRRCC1Q9C099 1032 aa11.53□□□□□ -0.56
TCOF1-212ENST00000513538 MKNK2Q9HBH9 465 aa11.53□□□□□ -0.56
TCOF1-212ENST00000513538 ECHDC1Q9NTX5 307 aa11.53□□□□□ -0.56
TCOF1-212ENST00000513538 MTMR4Q9NYA4 1195 aa11.53□□□□□ -0.56
TCOF1-212ENST00000513538 CXXC1Q9P0U4 656 aaPredicted RBP11.53□□□□□ -0.56
TCOF1-212ENST00000513538 ZNF536O15090 1300 aa11.53□□□□□ -0.56
TCOF1-212ENST00000513538 UMODL1Q5DID0 1318 aa11.53□□□□□ -0.56
TCOF1-212ENST00000513538 A0A0U1RQG5 324 aaPredicted RBP11.52□□□□□ -0.57
TCOF1-212ENST00000513538 ZBED4O75132 1171 aa11.52□□□□□ -0.57
TCOF1-212ENST00000513538 CD4P01730 458 aa11.52□□□□□ -0.57
TCOF1-212ENST00000513538 NKX3-2P78367 333 aa11.52□□□□□ -0.57
TCOF1-212ENST00000513538 PPIGQ13427 754 aaKnown RBP eCLIP11.52□□□□□ -0.57
TCOF1-212ENST00000513538 ADGRE1Q14246 886 aa11.52□□□□□ -0.57
TCOF1-212ENST00000513538 ZNF365Q70YC5 407 aa11.52□□□□□ -0.57
TCOF1-212ENST00000513538 ANKRD35Q8N283 1001 aa11.52□□□□□ -0.57
TCOF1-212ENST00000513538 FAM133AQ8N9E0 248 aa11.52□□□□□ -0.57
TCOF1-212ENST00000513538 PCSK9Q8NBP7 692 aaKnown RBP11.52□□□□□ -0.57
TCOF1-212ENST00000513538 MKL1Q969V6 931 aa11.52□□□□□ -0.57
TCOF1-212ENST00000513538 ABHD16BQ9H3Z7 469 aa11.52□□□□□ -0.57
TCOF1-212ENST00000513538 PRDM12Q9H4Q4 367 aa11.52□□□□□ -0.57
TCOF1-212ENST00000513538 HOMER2Q9NSB8 354 aa11.52□□□□□ -0.57
TCOF1-212ENST00000513538 MROH7Q68CQ1 1323 aa11.52□□□□□ -0.57
TCOF1-212ENST00000513538 SOWAHBA6NEL2 793 aa11.51□□□□□ -0.57
TCOF1-212ENST00000513538 CYP2C18P33260 490 aa11.51□□□□□ -0.57
TCOF1-212ENST00000513538 OAZ1P54368 228 aa11.51□□□□□ -0.57
TCOF1-212ENST00000513538 TJAP1Q5JTD0 557 aa11.51□□□□□ -0.57
TCOF1-212ENST00000513538 GNASQ5JWF2 1037 aa11.51□□□□□ -0.57
TCOF1-212ENST00000513538 TMEM63BQ5T3F8 832 aa11.51□□□□□ -0.57
TCOF1-212ENST00000513538 CXCL17Q6UXB2 119 aa11.51□□□□□ -0.57
TCOF1-212ENST00000513538 SLC43A3Q8NBI5 491 aa11.51□□□□□ -0.57
TCOF1-212ENST00000513538 GMCL1P1Q8NEA9 526 aa11.51□□□□□ -0.57
TCOF1-212ENST00000513538 CHST13Q8NET6 341 aa11.51□□□□□ -0.57
TCOF1-212ENST00000513538 CHMP4CQ96CF2 233 aa11.51□□□□□ -0.57
TCOF1-212ENST00000513538 VWCEQ96DN2 955 aa11.51□□□□□ -0.57
TCOF1-212ENST00000513538 SEC62Q99442 399 aaKnown RBP11.51□□□□□ -0.57
TCOF1-212ENST00000513538 A1CFQ9NQ94 594 aaKnown RBP11.51□□□□□ -0.57
TCOF1-212ENST00000513538 FEM1BQ9UK73 627 aa11.51□□□□□ -0.57
TCOF1-212ENST00000513538 GNEQ9Y223 722 aaKnown RBP11.51□□□□□ -0.57
TCOF1-212ENST00000513538 YBX2Q9Y2T7 364 aaKnown RBP11.51□□□□□ -0.57
TCOF1-212ENST00000513538 GRIN2DO15399 1336 aa11.51□□□□□ -0.57
TCOF1-212ENST00000513538 SCN5AQ14524 2016 aa11.5□□□□□ -0.57
TCOF1-212ENST00000513538 FOXP2O15409 715 aa11.5□□□□□ -0.57
TCOF1-212ENST00000513538 RNF113AO15541 343 aaKnown RBP11.5□□□□□ -0.57
TCOF1-212ENST00000513538 TTLL1O95922 423 aa11.5□□□□□ -0.57
TCOF1-212ENST00000513538 BMP3P12645 472 aa11.5□□□□□ -0.57
TCOF1-212ENST00000513538 TDO2P48775 406 aa11.5□□□□□ -0.57
TCOF1-212ENST00000513538 SLFN13Q68D06 897 aa11.5□□□□□ -0.57
TCOF1-212ENST00000513538 NEDD1Q8NHV4 660 aa11.5□□□□□ -0.57
TCOF1-212ENST00000513538 PPM1EQ8WY54 764 aa11.5□□□□□ -0.57
TCOF1-212ENST00000513538 VTI1AQ96AJ9 217 aa11.5□□□□□ -0.57
TCOF1-212ENST00000513538 AGBL1Q96MI9 1066 aa11.5□□□□□ -0.57
TCOF1-212ENST00000513538 PDGFCQ9NRA1 345 aa11.5□□□□□ -0.57
TCOF1-212ENST00000513538 RNF146Q9NTX7 359 aa11.5□□□□□ -0.57
TCOF1-212ENST00000513538 FBXO40Q9UH90 709 aa11.5□□□□□ -0.57
TCOF1-212ENST00000513538 CHD9Q3L8U1 2897 aa11.5□□□□□ -0.57
TCOF1-212ENST00000513538 MUC3AQ02505 3323 aa11.49□□□□□ -0.57
TCOF1-212ENST00000513538 TMEM232C9JQI7 657 aa11.49□□□□□ -0.57
TCOF1-212ENST00000513538 SMPD1P17405 629 aa11.49□□□□□ -0.57
TCOF1-212ENST00000513538 SNAP25P60880 206 aa11.49□□□□□ -0.57
TCOF1-212ENST00000513538 TNFAIP2Q03169 654 aa11.49□□□□□ -0.57
TCOF1-212ENST00000513538 PSRC1Q6PGN9 363 aaPredicted RBP11.49□□□□□ -0.57
TCOF1-212ENST00000513538 CCDC129Q6ZRS4 1044 aa11.49□□□□□ -0.57
TCOF1-212ENST00000513538 TLK2Q86UE8 772 aa11.49□□□□□ -0.57
TCOF1-212ENST00000513538 IFNL3Q8IZI9 196 aa11.49□□□□□ -0.57
TCOF1-212ENST00000513538 TMEM199Q8N511 208 aa11.49□□□□□ -0.57
TCOF1-212ENST00000513538 HERVK_113Q902F9 699 aa11.49□□□□□ -0.57
TCOF1-212ENST00000513538 SYMPKQ92797 1274 aaKnown RBP11.49□□□□□ -0.57
TCOF1-212ENST00000513538 PURBQ96QR8 312 aaKnown RBP11.49□□□□□ -0.57
TCOF1-212ENST00000513538 WNT8AQ9H1J5 351 aa11.49□□□□□ -0.57
TCOF1-212ENST00000513538 NKX2-4Q9H2Z4 354 aa11.49□□□□□ -0.57
TCOF1-212ENST00000513538 ACAD9Q9H845 621 aa11.49□□□□□ -0.57
TCOF1-212ENST00000513538 SPC25Q9HBM1 224 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms