RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 TTLL5Q6EMB2 1281 aa6.21□□□□□ -1.42
HTT-211ENST00000513326 ANKRD18AQ8IVF6 992 aa6.21□□□□□ -1.42
HTT-211ENST00000513326 VWA5B2Q8N398 1253 aa6.21□□□□□ -1.42
HTT-211ENST00000513326 ZBTB38Q8NAP3 1195 aaPredicted RBP6.21□□□□□ -1.42
HTT-211ENST00000513326 DIS3LQ8TF46 1054 aaKnown RBP6.21□□□□□ -1.42
HTT-211ENST00000513326 MYD88Q99836 296 aa6.21□□□□□ -1.42
HTT-211ENST00000513326 GREM2Q9H772 168 aa6.21□□□□□ -1.42
HTT-211ENST00000513326 CPA4Q9UI42 421 aa6.21□□□□□ -1.42
HTT-211ENST00000513326 HCN2Q9UL51 889 aa6.21□□□□□ -1.42
HTT-211ENST00000513326 ZMYND8Q9ULU4 1186 aaPredicted RBP6.21□□□□□ -1.42
HTT-211ENST00000513326 STXBP5LQ9Y2K9 1186 aa6.21□□□□□ -1.42
HTT-211ENST00000513326 IRS2Q9Y4H2 1338 aa6.21□□□□□ -1.42
HTT-211ENST00000513326 EYSQ5T1H1 3165 aa6.2□□□□□ -1.42
HTT-211ENST00000513326 BTBD19C9JJ37 291 aa6.2□□□□□ -1.42
HTT-211ENST00000513326 GJB1P08034 283 aa6.2□□□□□ -1.42
HTT-211ENST00000513326 RARAP10276 462 aa6.2□□□□□ -1.42
HTT-211ENST00000513326 VAMP1P23763 118 aa6.2□□□□□ -1.42
HTT-211ENST00000513326 IREB2P48200 963 aaKnown RBP6.2□□□□□ -1.42
HTT-211ENST00000513326 PRKCZQ05513 592 aa6.2□□□□□ -1.42
HTT-211ENST00000513326 TRIM28Q13263 835 aaKnown RBP6.2□□□□□ -1.42
HTT-211ENST00000513326 DLGAP5Q15398 846 aa6.2□□□□□ -1.42
HTT-211ENST00000513326 CFAP100Q494V2 611 aa6.2□□□□□ -1.42
HTT-211ENST00000513326 CCDC152Q4G0S7 254 aa6.2□□□□□ -1.42
HTT-211ENST00000513326 OTUD7BQ6GQQ9 843 aa6.2□□□□□ -1.42
HTT-211ENST00000513326 KRT25Q7Z3Z0 450 aa6.2□□□□□ -1.42
HTT-211ENST00000513326 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.2□□□□□ -1.42
HTT-211ENST00000513326 NPAS3Q8IXF0 933 aa6.2□□□□□ -1.42
HTT-211ENST00000513326 ANKRD13AQ8IZ07 590 aa6.2□□□□□ -1.42
HTT-211ENST00000513326 U2AF1L4Q8WU68 220 aaKnown RBP6.2□□□□□ -1.42
HTT-211ENST00000513326 TEPSINQ96N21 525 aa6.2□□□□□ -1.42
HTT-211ENST00000513326 GUCD1Q96NT3 240 aa6.2□□□□□ -1.42
HTT-211ENST00000513326 DUSP9Q99956 384 aaKnown RBP6.2□□□□□ -1.42
HTT-211ENST00000513326 GDF15Q99988 308 aa6.2□□□□□ -1.42
HTT-211ENST00000513326 PCGF6Q9BYE7 350 aa6.2□□□□□ -1.42
HTT-211ENST00000513326 TMEM39BQ9GZU3 492 aa6.2□□□□□ -1.42
HTT-211ENST00000513326 COA1Q9GZY4 146 aa6.2□□□□□ -1.42
HTT-211ENST00000513326 RNF208Q9H0X6 261 aa6.2□□□□□ -1.42
HTT-211ENST00000513326 PHAXQ9H814 394 aaKnown RBP6.2□□□□□ -1.42
HTT-211ENST00000513326 KIAA1522Q9P206 1035 aaPredicted RBP6.2□□□□□ -1.42
HTT-211ENST00000513326 NXF1Q9UBU9 619 aaKnown RBP6.2□□□□□ -1.42
HTT-211ENST00000513326 PARP2Q9UGN5 583 aa6.2□□□□□ -1.42
HTT-211ENST00000513326 RIPOR2Q9Y4F9 1068 aa6.2□□□□□ -1.42
HTT-211ENST00000513326 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.2□□□□□ -1.42
HTT-211ENST00000513326 MYO3BQ8WXR4 1341 aa6.2□□□□□ -1.42
HTT-211ENST00000513326 ADGRA2Q96PE1 1338 aa6.2□□□□□ -1.42
HTT-211ENST00000513326 ARAP2Q8WZ64 1704 aa6.19□□□□□ -1.42
HTT-211ENST00000513326 A0A1W2PPC1 479 aa6.19□□□□□ -1.42
HTT-211ENST00000513326 TLR2O60603 784 aa6.19□□□□□ -1.42
HTT-211ENST00000513326 PDE8AO60658 829 aa6.19□□□□□ -1.42
HTT-211ENST00000513326 MAP3K6O95382 1288 aa6.19□□□□□ -1.42
HTT-211ENST00000513326 PCCAP05165 728 aaPredicted RBP6.19□□□□□ -1.42
HTT-211ENST00000513326 ELNP15502 786 aa6.19□□□□□ -1.42
HTT-211ENST00000513326 SYN1P17600 705 aa6.19□□□□□ -1.42
HTT-211ENST00000513326 CES1P23141 567 aa6.19□□□□□ -1.42
HTT-211ENST00000513326 CTSWP56202 376 aa6.19□□□□□ -1.42
HTT-211ENST00000513326 GRIN2CQ14957 1233 aa6.19□□□□□ -1.42
HTT-211ENST00000513326 C17orf99Q6UX52 265 aa6.19□□□□□ -1.42
HTT-211ENST00000513326 C7orf61Q8IZ16 206 aa6.19□□□□□ -1.42
HTT-211ENST00000513326 C1orf127Q8N9H9 656 aa6.19□□□□□ -1.42
HTT-211ENST00000513326 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.19□□□□□ -1.42
HTT-211ENST00000513326 CCDC74AQ96AQ1 378 aa6.19□□□□□ -1.42
HTT-211ENST00000513326 FRMD6Q96NE9 622 aa6.19□□□□□ -1.42
HTT-211ENST00000513326 SLC30A3Q99726 388 aa6.19□□□□□ -1.42
HTT-211ENST00000513326 HTATIP2Q9BUP3 242 aa6.19□□□□□ -1.42
HTT-211ENST00000513326 CHRDQ9H2X0 955 aa6.19□□□□□ -1.42
HTT-211ENST00000513326 CNTN3Q9P232 1028 aa6.19□□□□□ -1.42
HTT-211ENST00000513326 ZFATQ9P243 1243 aa6.19□□□□□ -1.42
HTT-211ENST00000513326 SRRDQ9UH36 339 aa6.19□□□□□ -1.42
HTT-211ENST00000513326 GABRQQ9UN88 632 aa6.19□□□□□ -1.42
HTT-211ENST00000513326 NR2E3Q9Y5X4 410 aa6.19□□□□□ -1.42
HTT-211ENST00000513326 SNCAIPQ9Y6H5 919 aa6.19□□□□□ -1.42
HTT-211ENST00000513326 MYPNQ86TC9 1320 aa6.19□□□□□ -1.42
HTT-211ENST00000513326 A0A1B0GUL6 1792 aa6.18□□□□□ -1.42
HTT-211ENST00000513326 CHL1O00533 1208 aa6.18□□□□□ -1.42
HTT-211ENST00000513326 MMP20O60882 483 aa6.18□□□□□ -1.42
HTT-211ENST00000513326 NFKB1P19838 968 aa6.18□□□□□ -1.42
HTT-211ENST00000513326 GRK4P32298 578 aa6.18□□□□□ -1.42
HTT-211ENST00000513326 MAGEA10P43363 369 aaPredicted RBP6.18□□□□□ -1.42
HTT-211ENST00000513326 PSMC4P43686 418 aa6.18□□□□□ -1.42
HTT-211ENST00000513326 GTF2A2P52657 109 aa6.18□□□□□ -1.42
HTT-211ENST00000513326 CACNB3P54284 484 aa6.18□□□□□ -1.42
HTT-211ENST00000513326 RIPK4P57078 832 aa6.18□□□□□ -1.42
HTT-211ENST00000513326 DAB2P98082 770 aa6.18□□□□□ -1.42
HTT-211ENST00000513326 GRIK5Q16478 980 aa6.18□□□□□ -1.42
HTT-211ENST00000513326 SUPT20HL1Q3ZLR7 823 aa6.18□□□□□ -1.42
HTT-211ENST00000513326 OR13H1Q8NG92 308 aa6.18□□□□□ -1.42
HTT-211ENST00000513326 TTLL11Q8NHH1 800 aa6.18□□□□□ -1.42
HTT-211ENST00000513326 BHMTQ93088 406 aa6.18□□□□□ -1.42
HTT-211ENST00000513326 ZKSCAN4Q969J2 545 aaPredicted RBP6.18□□□□□ -1.42
HTT-211ENST00000513326 PAWRQ96IZ0 340 aaKnown RBP6.18□□□□□ -1.42
HTT-211ENST00000513326 FAM161BQ96MY7 647 aa6.18□□□□□ -1.42
HTT-211ENST00000513326 TDRD3Q9H7E2 651 aaKnown RBP6.18□□□□□ -1.42
HTT-211ENST00000513326 MRS2Q9HD23 443 aa6.18□□□□□ -1.42
HTT-211ENST00000513326 CD209Q9NNX6 404 aa6.18□□□□□ -1.42
HTT-211ENST00000513326 BSDC1Q9NW68 430 aaPredicted RBP6.18□□□□□ -1.42
HTT-211ENST00000513326 ZNF70Q9UC06 446 aaPredicted RBP6.18□□□□□ -1.42
HTT-211ENST00000513326 PRR12Q9ULL5 1215 aa6.18□□□□□ -1.42
HTT-211ENST00000513326 LAS1LQ9Y4W2 734 aaKnown RBP6.18□□□□□ -1.42
HTT-211ENST00000513326 PPP2R3BQ9Y5P8 575 aa6.18□□□□□ -1.42
HTT-211ENST00000513326 PHF20L1A8MW92 1017 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms