RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 MKNK1Q9BUB5 465 aa8.64□□□□□ -1.03
RFC1-215ENST00000512881 HDAC9Q9UKV0 1011 aa8.64□□□□□ -1.03
RFC1-215ENST00000512881 UTYO14607 1347 aa8.63□□□□□ -1.03
RFC1-215ENST00000512881 PTPRCP08575 1304 aa8.63□□□□□ -1.03
RFC1-215ENST00000512881 A0A0A0MRY4 1105 aa8.63□□□□□ -1.03
RFC1-215ENST00000512881 UBE2Q2LH0YL09 131 aa8.63□□□□□ -1.03
RFC1-215ENST00000512881 SASH1O94885 1247 aa8.63□□□□□ -1.03
RFC1-215ENST00000512881 MOB2Q70IA6 237 aa8.63□□□□□ -1.03
RFC1-215ENST00000512881 FAM35AQ86V20 835 aa8.63□□□□□ -1.03
RFC1-215ENST00000512881 RGL4Q8IZJ4 473 aa8.63□□□□□ -1.03
RFC1-215ENST00000512881 CERS5Q8N5B7 392 aa8.63□□□□□ -1.03
RFC1-215ENST00000512881 ZBED3Q96IU2 234 aaPredicted RBP8.63□□□□□ -1.03
RFC1-215ENST00000512881 CSRNP1Q96S65 589 aa8.63□□□□□ -1.03
RFC1-215ENST00000512881 PUS3Q9BZE2 481 aaKnown RBP8.63□□□□□ -1.03
RFC1-215ENST00000512881 RIPOR2Q9Y4F9 1068 aa8.63□□□□□ -1.03
RFC1-215ENST00000512881 KCNMB2Q9Y691 235 aa8.63□□□□□ -1.03
RFC1-215ENST00000512881 F8W031 263 aaPredicted RBP8.62□□□□□ -1.03
RFC1-215ENST00000512881 CPB1P15086 417 aa8.62□□□□□ -1.03
RFC1-215ENST00000512881 GATA4P43694 442 aa8.62□□□□□ -1.03
RFC1-215ENST00000512881 UBE4AQ14139 1066 aa8.62□□□□□ -1.03
RFC1-215ENST00000512881 DLGAP5Q15398 846 aa8.62□□□□□ -1.03
RFC1-215ENST00000512881 TRIP4Q15650 581 aaPredicted RBP8.62□□□□□ -1.03
RFC1-215ENST00000512881 GRIK4Q16099 956 aa8.62□□□□□ -1.03
RFC1-215ENST00000512881 GRIK5Q16478 980 aa8.62□□□□□ -1.03
RFC1-215ENST00000512881 ALDH1L2Q3SY69 923 aa8.62□□□□□ -1.03
RFC1-215ENST00000512881 RABL6Q3YEC7 729 aaPredicted RBP8.62□□□□□ -1.03
RFC1-215ENST00000512881 PERM1Q5SV97 790 aa8.62□□□□□ -1.03
RFC1-215ENST00000512881 TRMT2AQ8IZ69 625 aaKnown RBP8.62□□□□□ -1.03
RFC1-215ENST00000512881 ANKRD44Q8N8A2 993 aa8.62□□□□□ -1.03
RFC1-215ENST00000512881 ABHD8Q96I13 439 aa8.62□□□□□ -1.03
RFC1-215ENST00000512881 USP44Q9H0E7 712 aa8.62□□□□□ -1.03
RFC1-215ENST00000512881 BICC1Q9H694 974 aaKnown RBP8.62□□□□□ -1.03
RFC1-215ENST00000512881 RNF186Q9NXI6 227 aa8.62□□□□□ -1.03
RFC1-215ENST00000512881 FRRS1LQ9P0K9 344 aa8.62□□□□□ -1.03
RFC1-215ENST00000512881 SERPINA10Q9UK55 444 aa8.62□□□□□ -1.03
RFC1-215ENST00000512881 JAG2Q9Y219 1238 aa8.62□□□□□ -1.03
RFC1-215ENST00000512881 SCN9AQ15858 1988 aa8.62□□□□□ -1.03
RFC1-215ENST00000512881 XYLBO75191 536 aa8.61□□□□□ -1.03
RFC1-215ENST00000512881 TRPA1O75762 1119 aa8.61□□□□□ -1.03
RFC1-215ENST00000512881 ITGB7P26010 798 aa8.61□□□□□ -1.03
RFC1-215ENST00000512881 HIBADHP31937 336 aaKnown RBP8.61□□□□□ -1.03
RFC1-215ENST00000512881 NF2P35240 595 aa8.61□□□□□ -1.03
RFC1-215ENST00000512881 GYG1P46976 350 aa8.61□□□□□ -1.03
RFC1-215ENST00000512881 FKBP1AP62942 108 aaKnown RBP8.61□□□□□ -1.03
RFC1-215ENST00000512881 MLLT1Q03111 559 aaPredicted RBP8.61□□□□□ -1.03
RFC1-215ENST00000512881 PLAURQ03405 335 aa8.61□□□□□ -1.03
RFC1-215ENST00000512881 DOC2BQ14184 412 aa8.61□□□□□ -1.03
RFC1-215ENST00000512881 PCSK7Q16549 785 aa8.61□□□□□ -1.03
RFC1-215ENST00000512881 CFAP100Q494V2 611 aa8.61□□□□□ -1.03
RFC1-215ENST00000512881 LRRC24Q50LG9 513 aa8.61□□□□□ -1.03
RFC1-215ENST00000512881 RASAL3Q86YV0 1011 aa8.61□□□□□ -1.03
RFC1-215ENST00000512881 APOBEC3FQ8IUX4 373 aaKnown RBP8.61□□□□□ -1.03
RFC1-215ENST00000512881 FAM84BQ96KN1 310 aaPredicted RBP8.61□□□□□ -1.03
RFC1-215ENST00000512881 DEFB129Q9H1M3 183 aa8.61□□□□□ -1.03
RFC1-215ENST00000512881 SAGE1Q9NXZ1 904 aa8.61□□□□□ -1.03
RFC1-215ENST00000512881 PCDHAC2Q9Y5I4 1007 aa8.61□□□□□ -1.03
RFC1-215ENST00000512881 FAM205AQ6ZU69 1335 aa8.6□□□□□ -1.03
RFC1-215ENST00000512881 MROH5Q6ZUA9 1318 aa8.6□□□□□ -1.03
RFC1-215ENST00000512881 CCER2I3L3R5 266 aa8.6□□□□□ -1.03
RFC1-215ENST00000512881 RGS9O75916 674 aaPredicted RBP8.6□□□□□ -1.03
RFC1-215ENST00000512881 PRKG1Q13976 671 aa8.6□□□□□ -1.03
RFC1-215ENST00000512881 METTL24Q5JXM2 366 aa8.6□□□□□ -1.03
RFC1-215ENST00000512881 FBXO33Q7Z6M2 555 aa8.6□□□□□ -1.03
RFC1-215ENST00000512881 CMTR1Q8N1G2 835 aaKnown RBP8.6□□□□□ -1.03
RFC1-215ENST00000512881 TDRD7Q8NHU6 1098 aaKnown RBP8.6□□□□□ -1.03
RFC1-215ENST00000512881 PRMT6Q96LA8 375 aaPredicted RBP8.6□□□□□ -1.03
RFC1-215ENST00000512881 NACC1Q96RE7 527 aa8.6□□□□□ -1.03
RFC1-215ENST00000512881 SMC4Q9NTJ3 1288 aa8.6□□□□□ -1.03
RFC1-215ENST00000512881 GTF3C3Q9Y5Q9 886 aa8.6□□□□□ -1.03
RFC1-215ENST00000512881 CLRN2A0PK11 232 aa8.59□□□□□ -1.03
RFC1-215ENST00000512881 MYO1BO43795 1136 aa8.59□□□□□ -1.03
RFC1-215ENST00000512881 CT47B1P0C2W7 299 aaPredicted RBP8.59□□□□□ -1.03
RFC1-215ENST00000512881 ELNP15502 786 aa8.59□□□□□ -1.03
RFC1-215ENST00000512881 SELPP16109 830 aa8.59□□□□□ -1.03
RFC1-215ENST00000512881 BRD2P25440 801 aaKnown RBP8.59□□□□□ -1.03
RFC1-215ENST00000512881 RBM5P52756 815 aaKnown RBP eCLIP8.59□□□□□ -1.03
RFC1-215ENST00000512881 NRLP54845 237 aa8.59□□□□□ -1.03
RFC1-215ENST00000512881 PTPN12Q05209 780 aaKnown RBP8.59□□□□□ -1.03
RFC1-215ENST00000512881 MFSD14BQ5SR56 506 aa8.59□□□□□ -1.03
RFC1-215ENST00000512881 LDLRAD1Q5T700 205 aa8.59□□□□□ -1.03
RFC1-215ENST00000512881 ARMC9Q7Z3E5 817 aa8.59□□□□□ -1.03
RFC1-215ENST00000512881 VPS37DQ86XT2 251 aa8.59□□□□□ -1.03
RFC1-215ENST00000512881 KLHDC4Q8TBB5 520 aa8.59□□□□□ -1.03
RFC1-215ENST00000512881 MCOLN1Q9GZU1 580 aa8.59□□□□□ -1.03
RFC1-215ENST00000512881 TLR7Q9NYK1 1049 aaKnown RBP8.59□□□□□ -1.03
RFC1-215ENST00000512881 NOB1Q9ULX3 412 aaKnown RBP8.59□□□□□ -1.03
RFC1-215ENST00000512881 TRPM7Q96QT4 1865 aa8.59□□□□□ -1.03
RFC1-215ENST00000512881 THSD7BQ9C0I4 1608 aa8.58□□□□□ -1.04
RFC1-215ENST00000512881 AOX1Q06278 1338 aa8.58□□□□□ -1.04
RFC1-215ENST00000512881 CCDC85CA6NKD9 419 aa8.58□□□□□ -1.04
RFC1-215ENST00000512881 PDE8BO95263 885 aa8.58□□□□□ -1.04
RFC1-215ENST00000512881 HOXD8P13378 290 aaPredicted RBP8.58□□□□□ -1.04
RFC1-215ENST00000512881 NAA30Q147X3 362 aaPredicted RBP8.58□□□□□ -1.04
RFC1-215ENST00000512881 SUPT20HL1Q3ZLR7 823 aa8.58□□□□□ -1.04
RFC1-215ENST00000512881 CAVIN4Q5BKX8 364 aa8.58□□□□□ -1.04
RFC1-215ENST00000512881 FMR1NBQ8N0W7 255 aaPredicted RBP8.58□□□□□ -1.04
RFC1-215ENST00000512881 VGLL2Q8N8G2 317 aa8.58□□□□□ -1.04
RFC1-215ENST00000512881 VEZTQ9HBM0 779 aa8.58□□□□□ -1.04
RFC1-215ENST00000512881 TPSG1Q9NRR2 321 aa8.58□□□□□ -1.04
RFC1-215ENST00000512881 ANGEL1Q9UNK9 670 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms