RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 RPUSD2Q8IZ73 545 aaKnown RBP11.16□□□□□ -0.62
NUP54-211ENST00000512151 MIGA1Q8NAN2 632 aa11.16□□□□□ -0.62
NUP54-211ENST00000512151 CFAP54Q96N23 3096 aa11.15□□□□□ -0.62
NUP54-211ENST00000512151 USP34Q70CQ2 3546 aa11.15□□□□□ -0.62
NUP54-211ENST00000512151 PTPRZ1P23471 2315 aaPredicted RBP11.15□□□□□ -0.63
NUP54-211ENST00000512151 DNAJC25-GNG10A0A024R161 153 aa11.15□□□□□ -0.63
NUP54-211ENST00000512151 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.15□□□□□ -0.63
NUP54-211ENST00000512151 GRXCR2A6NFK2 248 aa11.15□□□□□ -0.63
NUP54-211ENST00000512151 STAT3P40763 770 aa11.15□□□□□ -0.63
NUP54-211ENST00000512151 USP5P45974 858 aa11.15□□□□□ -0.63
NUP54-211ENST00000512151 PSMC6P62333 389 aa11.15□□□□□ -0.63
NUP54-211ENST00000512151 NKX3-2P78367 333 aa11.15□□□□□ -0.63
NUP54-211ENST00000512151 ITGA7Q13683 1181 aa11.15□□□□□ -0.63
NUP54-211ENST00000512151 HERC6Q8IVU3 1022 aa11.15□□□□□ -0.63
NUP54-211ENST00000512151 MSL3Q8N5Y2 521 aaKnown RBP11.15□□□□□ -0.63
NUP54-211ENST00000512151 SSH1Q8WYL5 1049 aa11.15□□□□□ -0.63
NUP54-211ENST00000512151 KATNBL1Q9H079 304 aa11.15□□□□□ -0.63
NUP54-211ENST00000512151 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.15□□□□□ -0.63
NUP54-211ENST00000512151 ZNF214Q9UL59 606 aaPredicted RBP11.15□□□□□ -0.63
NUP54-211ENST00000512151 CACNA1HO95180 2353 aa11.14□□□□□ -0.63
NUP54-211ENST00000512151 TET1Q8NFU7 2136 aa11.14□□□□□ -0.63
NUP54-211ENST00000512151 VWA5AO00534 786 aa11.14□□□□□ -0.63
NUP54-211ENST00000512151 MPHOSPH10O00566 681 aaKnown RBP11.14□□□□□ -0.63
NUP54-211ENST00000512151 UQCRFS1P1P0C7P4 283 aa11.14□□□□□ -0.63
NUP54-211ENST00000512151 CYP7A1P22680 504 aa11.14□□□□□ -0.63
NUP54-211ENST00000512151 FOXK2Q01167 660 aa11.14□□□□□ -0.63
NUP54-211ENST00000512151 TMCO2Q7Z6W1 182 aaPredicted RBP11.14□□□□□ -0.63
NUP54-211ENST00000512151 FAM9BQ8IZU0 186 aa11.14□□□□□ -0.63
NUP54-211ENST00000512151 SLC9A7Q96T83 725 aa11.14□□□□□ -0.63
NUP54-211ENST00000512151 SPC25Q9HBM1 224 aa11.14□□□□□ -0.63
NUP54-211ENST00000512151 CYP2C9P11712 490 aa11.13□□□□□ -0.63
NUP54-211ENST00000512151 TCF15Q12870 199 aa11.13□□□□□ -0.63
NUP54-211ENST00000512151 TTC6Q86TZ1 520 aa11.13□□□□□ -0.63
NUP54-211ENST00000512151 DCBLD2Q96PD2 775 aa11.13□□□□□ -0.63
NUP54-211ENST00000512151 VCPKMTQ9H867 229 aa11.13□□□□□ -0.63
NUP54-211ENST00000512151 LMCD1Q9NZU5 365 aa11.13□□□□□ -0.63
NUP54-211ENST00000512151 RIPK3Q9Y572 518 aa11.13□□□□□ -0.63
NUP54-211ENST00000512151 H3BQ06 376 aaPredicted RBP11.12□□□□□ -0.63
NUP54-211ENST00000512151 ZAP70P43403 619 aa11.12□□□□□ -0.63
NUP54-211ENST00000512151 ZP2Q05996 745 aa11.12□□□□□ -0.63
NUP54-211ENST00000512151 PHOSPHO2Q8TCD6 241 aa11.12□□□□□ -0.63
NUP54-211ENST00000512151 MEIS3Q99687 375 aa11.12□□□□□ -0.63
NUP54-211ENST00000512151 SUGCTQ9HAC7 445 aa11.12□□□□□ -0.63
NUP54-211ENST00000512151 ALG13Q9NP73 1137 aaKnown RBP11.12□□□□□ -0.63
NUP54-211ENST00000512151 TRMT13Q9NUP7 481 aaKnown RBP11.12□□□□□ -0.63
NUP54-211ENST00000512151 FAM86C1Q9NVL1 165 aa11.12□□□□□ -0.63
NUP54-211ENST00000512151 PPP1R9AQ9ULJ8 1098 aa11.12□□□□□ -0.63
NUP54-211ENST00000512151 TMX2Q9Y320 296 aa11.12□□□□□ -0.63
NUP54-211ENST00000512151 ZNF536O15090 1300 aa11.12□□□□□ -0.63
NUP54-211ENST00000512151 WDR46O15213 610 aaKnown RBP11.11□□□□□ -0.63
NUP54-211ENST00000512151 GFRA3O60609 400 aa11.11□□□□□ -0.63
NUP54-211ENST00000512151 PFKMP08237 780 aa11.11□□□□□ -0.63
NUP54-211ENST00000512151 CYP2D6P10635 497 aa11.11□□□□□ -0.63
NUP54-211ENST00000512151 AKR1B1P15121 316 aa11.11□□□□□ -0.63
NUP54-211ENST00000512151 TMEM63BQ5T3F8 832 aa11.11□□□□□ -0.63
NUP54-211ENST00000512151 ARMCX2Q7L311 632 aa11.11□□□□□ -0.63
NUP54-211ENST00000512151 ZNF467Q7Z7K2 595 aaPredicted RBP11.11□□□□□ -0.63
NUP54-211ENST00000512151 NEK9Q8TD19 979 aa11.11□□□□□ -0.63
NUP54-211ENST00000512151 MFSD14AQ96MC6 490 aa11.11□□□□□ -0.63
NUP54-211ENST00000512151 ALDH8A1Q9H2A2 487 aaPredicted RBP11.11□□□□□ -0.63
NUP54-211ENST00000512151 ABHD16BQ9H3Z7 469 aa11.11□□□□□ -0.63
NUP54-211ENST00000512151 MTUS1Q9ULD2 1270 aa11.11□□□□□ -0.63
NUP54-211ENST00000512151 GNEQ9Y223 722 aaKnown RBP11.11□□□□□ -0.63
NUP54-211ENST00000512151 DDX49Q9Y6V7 483 aaKnown RBP11.11□□□□□ -0.63
NUP54-211ENST00000512151 SRGAP3O43295 1099 aa11.1□□□□□ -0.63
NUP54-211ENST00000512151 CABYRO75952 493 aa11.1□□□□□ -0.63
NUP54-211ENST00000512151 IRS1P35568 1242 aa11.1□□□□□ -0.63
NUP54-211ENST00000512151 PTPN5P54829 565 aa11.1□□□□□ -0.63
NUP54-211ENST00000512151 FSCN1Q16658 493 aaKnown RBP11.1□□□□□ -0.63
NUP54-211ENST00000512151 TTC39AQ5SRH9 613 aa11.1□□□□□ -0.63
NUP54-211ENST00000512151 TMEM179Q6ZVK1 233 aa11.1□□□□□ -0.63
NUP54-211ENST00000512151 DDX11Q96FC9 970 aa11.1□□□□□ -0.63
NUP54-211ENST00000512151 DBNDD2Q9BQY9 259 aa11.1□□□□□ -0.63
NUP54-211ENST00000512151 CACNA1BQ00975 2339 aa11.1□□□□□ -0.63
NUP54-211ENST00000512151 NAV1Q8NEY1 1877 aa11.09□□□□□ -0.63
NUP54-211ENST00000512151 KIF28PB7ZC32 967 aa11.09□□□□□ -0.63
NUP54-211ENST00000512151 POLR3DP05423 398 aaPredicted RBP11.09□□□□□ -0.63
NUP54-211ENST00000512151 ACTN1P12814 892 aa11.09□□□□□ -0.63
NUP54-211ENST00000512151 COPB2P35606 906 aa11.09□□□□□ -0.63
NUP54-211ENST00000512151 TNFAIP2Q03169 654 aa11.09□□□□□ -0.63
NUP54-211ENST00000512151 ICA1Q05084 483 aa11.09□□□□□ -0.63
NUP54-211ENST00000512151 FAM83BQ5T0W9 1011 aa11.09□□□□□ -0.63
NUP54-211ENST00000512151 SNRNP48Q6IEG0 339 aaKnown RBP11.09□□□□□ -0.63
NUP54-211ENST00000512151 TLK2Q86UE8 772 aa11.09□□□□□ -0.63
NUP54-211ENST00000512151 CCDC144CPQ8IYA2 1237 aa11.09□□□□□ -0.63
NUP54-211ENST00000512151 MAGEB6Q8N7X4 407 aa11.09□□□□□ -0.63
NUP54-211ENST00000512151 PPP1R13LQ8WUF5 828 aa11.09□□□□□ -0.63
NUP54-211ENST00000512151 DYNLL2Q96FJ2 89 aa11.09□□□□□ -0.63
NUP54-211ENST00000512151 MUTYHQ9UIF7 546 aa11.09□□□□□ -0.63
NUP54-211ENST00000512151 RIF1Q5UIP0 2472 aaKnown RBP11.09□□□□□ -0.63
NUP54-211ENST00000512151 TRIOO75962 3097 aa11.08□□□□□ -0.63
NUP54-211ENST00000512151 TNKSO95271 1327 aa11.08□□□□□ -0.64
NUP54-211ENST00000512151 SMPD1P17405 629 aa11.08□□□□□ -0.64
NUP54-211ENST00000512151 CLCN6P51797 869 aa11.08□□□□□ -0.64
NUP54-211ENST00000512151 ERVK-21P61565 698 aa11.08□□□□□ -0.64
NUP54-211ENST00000512151 CNTN2Q02246 1040 aa11.08□□□□□ -0.64
NUP54-211ENST00000512151 MTX1Q13505 466 aa11.08□□□□□ -0.64
NUP54-211ENST00000512151 NOL8Q76FK4 1167 aaKnown RBP11.08□□□□□ -0.64
NUP54-211ENST00000512151 RIOK1Q9BRS2 568 aaKnown RBP11.08□□□□□ -0.64
NUP54-211ENST00000512151 ARHGEF10LQ9HCE6 1279 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 164.6 ms