RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 EHMT1Q9H9B1 1298 aa11.98□□□□□ -0.49
CPNE4-209ENST00000512055 PYCARDQ9ULZ3 195 aa11.98□□□□□ -0.49
CPNE4-209ENST00000512055 MRPS9P82933 396 aaKnown RBP11.98□□□□□ -0.49
CPNE4-209ENST00000512055 FYB2Q5VWT5 728 aa11.98□□□□□ -0.49
CPNE4-209ENST00000512055 CCDC62Q6P9F0 684 aa11.98□□□□□ -0.49
CPNE4-209ENST00000512055 RMDN2Q96LZ7 410 aa11.98□□□□□ -0.49
CPNE4-209ENST00000512055 GPR101Q96P66 508 aaPredicted RBP11.98□□□□□ -0.49
CPNE4-209ENST00000512055 HDAC9Q9UKV0 1011 aa11.98□□□□□ -0.49
CPNE4-209ENST00000512055 ZNF500O60304 480 aaPredicted RBP11.97□□□□□ -0.49
CPNE4-209ENST00000512055 BTDP43251 543 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 PLCD1P51178 756 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 SESN3P58005 492 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 NONOQ15233 471 aaKnown RBP eCLIP11.97□□□□□ -0.49
CPNE4-209ENST00000512055 GSTA5Q7RTV2 222 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 SPATS2Q86XZ4 545 aaKnown RBP11.97□□□□□ -0.49
CPNE4-209ENST00000512055 POLR3EQ9NVU0 708 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 GUCA1BQ9UMX6 200 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 MRPL12P52815 198 aaKnown RBP11.97□□□□□ -0.49
CPNE4-209ENST00000512055 GRM1Q13255 1194 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 CYB5R4Q7L1T6 521 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 ARMC9Q7Z3E5 817 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 RGS22Q8NE09 1264 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 PGBD1Q96JS3 809 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 DDX41Q9UJV9 622 aaKnown RBP11.97□□□□□ -0.49
CPNE4-209ENST00000512055 A0A1W2PQ27 194 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 A0A1W2PQ64 194 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 A0A1W2PQD8 194 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 SCG2P13521 617 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 RFX5P48382 616 aaPredicted RBP11.97□□□□□ -0.49
CPNE4-209ENST00000512055 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.97□□□□□ -0.49
CPNE4-209ENST00000512055 FANCLQ9NW38 375 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 NUB1Q9Y5A7 615 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 PCDHA5Q9Y5H7 936 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 ZNF609O15014 1411 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 LUC7L3O95232 432 aaKnown RBP11.97□□□□□ -0.49
CPNE4-209ENST00000512055 MYCNP04198 464 aaPredicted RBP11.97□□□□□ -0.49
CPNE4-209ENST00000512055 IRX5P78411 483 aaPredicted RBP11.97□□□□□ -0.49
CPNE4-209ENST00000512055 PTPN21Q16825 1174 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 ZNF569Q5MCW4 686 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 SV2BQ7L1I2 683 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 FCHSD1Q86WN1 690 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 BIN2Q9UBW5 565 aaPredicted RBP11.97□□□□□ -0.49
CPNE4-209ENST00000512055 FMNL1O95466 1100 aaPredicted RBP11.97□□□□□ -0.49
CPNE4-209ENST00000512055 PCYT1AP49585 367 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 INF2Q27J81 1249 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 GPIHBP1Q8IV16 184 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 USP40Q9NVE5 1235 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 TAB2Q9NYJ8 693 aa11.97□□□□□ -0.49
CPNE4-209ENST00000512055 FBXO2Q9UK22 296 aaPredicted RBP11.97□□□□□ -0.49
CPNE4-209ENST00000512055 NEDD4P46934 1319 aa11.96□□□□□ -0.49
CPNE4-209ENST00000512055 SOS2Q07890 1332 aaPredicted RBP11.96□□□□□ -0.49
CPNE4-209ENST00000512055 DYTNA2CJ06 578 aa11.96□□□□□ -0.49
CPNE4-209ENST00000512055 SLC8A1P32418 973 aa11.96□□□□□ -0.49
CPNE4-209ENST00000512055 LONP1P36776 959 aaKnown RBP11.96□□□□□ -0.49
CPNE4-209ENST00000512055 PTGDRQ13258 359 aa11.96□□□□□ -0.49
CPNE4-209ENST00000512055 TRIM28Q13263 835 aaKnown RBP11.96□□□□□ -0.49
CPNE4-209ENST00000512055 WDR78Q5VTH9 848 aa11.96□□□□□ -0.49
CPNE4-209ENST00000512055 RAB3IPQ96QF0 476 aaPredicted RBP11.96□□□□□ -0.49
CPNE4-209ENST00000512055 FRMPD2Q68DX3 1309 aaPredicted RBP11.96□□□□□ -0.49
CPNE4-209ENST00000512055 SHPRHQ149N8 1683 aa11.96□□□□□ -0.49
CPNE4-209ENST00000512055 SMCO2A6NFE2 343 aa11.96□□□□□ -0.49
CPNE4-209ENST00000512055 KLRF2D3W0D1 207 aa11.96□□□□□ -0.49
CPNE4-209ENST00000512055 APBA3O96018 575 aa11.96□□□□□ -0.49
CPNE4-209ENST00000512055 ZYXQ15942 572 aaKnown RBP11.96□□□□□ -0.49
CPNE4-209ENST00000512055 BLIDQ8IZY5 108 aa11.96□□□□□ -0.49
CPNE4-209ENST00000512055 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.96□□□□□ -0.5
CPNE4-209ENST00000512055 TUBB4AP04350 444 aa11.96□□□□□ -0.5
CPNE4-209ENST00000512055 USP17L8P0C7I0 530 aa11.96□□□□□ -0.5
CPNE4-209ENST00000512055 OAS2P29728 719 aaKnown RBP11.96□□□□□ -0.5
CPNE4-209ENST00000512055 PAK1Q13153 545 aa11.96□□□□□ -0.5
CPNE4-209ENST00000512055 DYMQ7RTS9 669 aa11.96□□□□□ -0.5
CPNE4-209ENST00000512055 LRRC47Q8N1G4 583 aaKnown RBP11.96□□□□□ -0.5
CPNE4-209ENST00000512055 TBC1D22AQ8WUA7 517 aa11.96□□□□□ -0.5
CPNE4-209ENST00000512055 ATP8A2Q9NTI2 1148 aa11.96□□□□□ -0.5
CPNE4-209ENST00000512055 SCINQ9Y6U3 715 aa11.96□□□□□ -0.5
CPNE4-209ENST00000512055 CDHR2Q9BYE9 1310 aa11.96□□□□□ -0.5
CPNE4-209ENST00000512055 TUBBP07437 444 aa11.96□□□□□ -0.5
CPNE4-209ENST00000512055 SLC1A4P43007 532 aa11.96□□□□□ -0.5
CPNE4-209ENST00000512055 ADKP55263 362 aaKnown RBP11.96□□□□□ -0.5
CPNE4-209ENST00000512055 MECOMQ03112 1051 aa11.96□□□□□ -0.5
CPNE4-209ENST00000512055 PPP1R7Q15435 360 aa11.96□□□□□ -0.5
CPNE4-209ENST00000512055 GJC2Q5T442 439 aaPredicted RBP11.96□□□□□ -0.5
CPNE4-209ENST00000512055 RASGRP4Q8TDF6 673 aa11.96□□□□□ -0.5
CPNE4-209ENST00000512055 CELF1Q92879 486 aaKnown RBP11.96□□□□□ -0.5
CPNE4-209ENST00000512055 PXDNQ92626 1479 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 A0A0G2JLW4 131 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 TUBB4BP68371 445 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 HSP90AA5PQ58FG0 334 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 ZBTB41Q5SVQ8 909 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 GRAMD1CQ8IYS0 662 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 KIAA1524Q8TCG1 905 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 CSRNP2Q9H175 543 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 MTRF1LQ9UGC7 380 aaKnown RBP11.95□□□□□ -0.5
CPNE4-209ENST00000512055 TRIM37O94972 964 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 BAG2O95816 211 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 TBC1D8BQ0IIM8 1120 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 CNGA4Q8IV77 575 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 CSGALNACT2Q8N6G5 542 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 TDRD7Q8NHU6 1098 aaKnown RBP11.95□□□□□ -0.5
CPNE4-209ENST00000512055 ERO1AQ96HE7 468 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms