RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 USP17L24Q0WX57 530 aa22.78■■□□□ 1.24
SMAD1-211ENST00000512019 GRM4Q14833 912 aa22.78■■□□□ 1.24
SMAD1-211ENST00000512019 POTEEQ6S8J3 1075 aa22.78■■□□□ 1.24
SMAD1-211ENST00000512019 CTCFLQ8NI51 663 aaPredicted RBP22.78■■□□□ 1.24
SMAD1-211ENST00000512019 TRIB2Q92519 343 aa22.78■■□□□ 1.24
SMAD1-211ENST00000512019 MYL10Q9BUA6 226 aa22.78■■□□□ 1.24
SMAD1-211ENST00000512019 RBPJLQ9UBG7 517 aa22.78■■□□□ 1.24
SMAD1-211ENST00000512019 NR2E3Q9Y5X4 410 aa22.78■■□□□ 1.24
SMAD1-211ENST00000512019 Q3C1V9 767 aa22.77■■□□□ 1.24
SMAD1-211ENST00000512019 RASGRP2Q7LDG7 609 aa22.77■■□□□ 1.24
SMAD1-211ENST00000512019 CHMP4CQ96CF2 233 aa22.77■■□□□ 1.24
SMAD1-211ENST00000512019 ZNF274Q96GC6 653 aaPredicted RBP22.77■■□□□ 1.24
SMAD1-211ENST00000512019 FRMPD3Q5JV73 1810 aa22.76■■□□□ 1.23
SMAD1-211ENST00000512019 GOLGA8AA7E2F4 631 aa22.76■■□□□ 1.23
SMAD1-211ENST00000512019 EVI5O60447 810 aa22.76■■□□□ 1.23
SMAD1-211ENST00000512019 MCM2P49736 904 aa22.76■■□□□ 1.23
SMAD1-211ENST00000512019 STAT2P52630 851 aa22.76■■□□□ 1.23
SMAD1-211ENST00000512019 KCTD1Q719H9 257 aa22.76■■□□□ 1.23
SMAD1-211ENST00000512019 GPRC5AQ8NFJ5 357 aa22.76■■□□□ 1.23
SMAD1-211ENST00000512019 FEM1BQ9UK73 627 aa22.76■■□□□ 1.23
SMAD1-211ENST00000512019 FRMPD2Q68DX3 1309 aaPredicted RBP22.76■■□□□ 1.23
SMAD1-211ENST00000512019 NID2Q14112 1375 aa22.76■■□□□ 1.23
SMAD1-211ENST00000512019 TMEM232C9JQI7 657 aa22.75■■□□□ 1.23
SMAD1-211ENST00000512019 FLOT1O75955 427 aa22.75■■□□□ 1.23
SMAD1-211ENST00000512019 RXRAP19793 462 aa22.75■■□□□ 1.23
SMAD1-211ENST00000512019 GNAQP50148 359 aa22.75■■□□□ 1.23
SMAD1-211ENST00000512019 METAP2P50579 478 aaKnown RBP eCLIP22.75■■□□□ 1.23
SMAD1-211ENST00000512019 IKQ13123 557 aaPredicted RBP22.75■■□□□ 1.23
SMAD1-211ENST00000512019 PPP2R5BQ15173 497 aa22.75■■□□□ 1.23
SMAD1-211ENST00000512019 CATSPERGQ6ZRH7 1159 aa22.75■■□□□ 1.23
SMAD1-211ENST00000512019 NOL8Q76FK4 1167 aaKnown RBP22.75■■□□□ 1.23
SMAD1-211ENST00000512019 FAM160B2Q86V87 743 aa22.75■■□□□ 1.23
SMAD1-211ENST00000512019 PAGR1Q9BTK6 254 aa22.75■■□□□ 1.23
SMAD1-211ENST00000512019 PORCNQ9H237 461 aa22.75■■□□□ 1.23
SMAD1-211ENST00000512019 HMX1Q9NP08 348 aaPredicted RBP22.75■■□□□ 1.23
SMAD1-211ENST00000512019 RBM28Q9NW13 759 aaKnown RBP22.75■■□□□ 1.23
SMAD1-211ENST00000512019 LIMCH1Q9UPQ0 1083 aa22.75■■□□□ 1.23
SMAD1-211ENST00000512019 RPTORQ8N122 1335 aa22.75■■□□□ 1.23
SMAD1-211ENST00000512019 SZT2Q5T011 3432 aa22.75■■□□□ 1.23
SMAD1-211ENST00000512019 CCDC196A0A1B0GTZ2 297 aa22.74■■□□□ 1.23
SMAD1-211ENST00000512019 PLA2G6O60733 806 aa22.74■■□□□ 1.23
SMAD1-211ENST00000512019 PDIA3P30101 505 aaKnown RBP22.74■■□□□ 1.23
SMAD1-211ENST00000512019 MNX1P50219 401 aaPredicted RBP22.74■■□□□ 1.23
SMAD1-211ENST00000512019 ERVK-9P63128 1117 aa22.74■■□□□ 1.23
SMAD1-211ENST00000512019 ERVK-24P63145 666 aa22.74■■□□□ 1.23
SMAD1-211ENST00000512019 RTN1Q16799 776 aa22.74■■□□□ 1.23
SMAD1-211ENST00000512019 RAB11FIP4Q86YS3 637 aa22.74■■□□□ 1.23
SMAD1-211ENST00000512019 CCDC144CPQ8IYA2 1237 aa22.74■■□□□ 1.23
SMAD1-211ENST00000512019 FANCBQ8NB91 859 aa22.74■■□□□ 1.23
SMAD1-211ENST00000512019 CHURC1Q8WUH1 139 aa22.74■■□□□ 1.23
SMAD1-211ENST00000512019 SLF1Q9BQI6 1058 aa22.74■■□□□ 1.23
SMAD1-211ENST00000512019 LARP6Q9BRS8 491 aaKnown RBP22.74■■□□□ 1.23
SMAD1-211ENST00000512019 GPCPD1Q9NPB8 672 aa22.74■■□□□ 1.23
SMAD1-211ENST00000512019 MAD2L2Q9UI95 211 aa22.74■■□□□ 1.23
SMAD1-211ENST00000512019 TPCN1Q9ULQ1 816 aa22.74■■□□□ 1.23
SMAD1-211ENST00000512019 RANBP2P49792 3224 aaKnown RBP22.73■■□□□ 1.23
SMAD1-211ENST00000512019 PALM3A6NDB9 673 aaPredicted RBP22.73■■□□□ 1.23
SMAD1-211ENST00000512019 GOLGA8HP0CJ92 632 aa22.73■■□□□ 1.23
SMAD1-211ENST00000512019 CAPN2P17655 700 aa22.73■■□□□ 1.23
SMAD1-211ENST00000512019 COG2Q14746 738 aa22.73■■□□□ 1.23
SMAD1-211ENST00000512019 NECAB2Q7Z6G3 386 aa22.73■■□□□ 1.23
SMAD1-211ENST00000512019 NUDT12Q9BQG2 462 aa22.73■■□□□ 1.23
SMAD1-211ENST00000512019 LZTS2Q9BRK4 669 aa22.73■■□□□ 1.23
SMAD1-211ENST00000512019 SLKQ9H2G2 1235 aaPredicted RBP22.73■■□□□ 1.23
SMAD1-211ENST00000512019 KLRF2D3W0D1 207 aa22.72■■□□□ 1.23
SMAD1-211ENST00000512019 BTNL9Q6UXG8 535 aa22.72■■□□□ 1.23
SMAD1-211ENST00000512019 ZSCAN31Q96LW9 406 aaPredicted RBP22.72■■□□□ 1.23
SMAD1-211ENST00000512019 HOXC10Q9NYD6 342 aa22.72■■□□□ 1.23
SMAD1-211ENST00000512019 PPP1R9AQ9ULJ8 1098 aa22.72■■□□□ 1.23
SMAD1-211ENST00000512019 CNMDO75829 334 aa22.71■■□□□ 1.23
SMAD1-211ENST00000512019 PRKAR2AP13861 404 aaKnown RBP22.71■■□□□ 1.23
SMAD1-211ENST00000512019 CCL14Q16627 93 aa22.71■■□□□ 1.23
SMAD1-211ENST00000512019 MAP3K21Q5TCX8 1036 aa22.71■■□□□ 1.23
SMAD1-211ENST00000512019 SYDE2Q5VT97 1194 aa22.71■■□□□ 1.23
SMAD1-211ENST00000512019 TTBK2Q6IQ55 1244 aa22.71■■□□□ 1.23
SMAD1-211ENST00000512019 GPR142Q7Z601 462 aa22.71■■□□□ 1.23
SMAD1-211ENST00000512019 STAG2Q8N3U4 1231 aa22.71■■□□□ 1.23
SMAD1-211ENST00000512019 ANKLE1Q8NAG6 615 aa22.71■■□□□ 1.23
SMAD1-211ENST00000512019 PRPF38AQ8NAV1 312 aaKnown RBP22.71■■□□□ 1.23
SMAD1-211ENST00000512019 GTF3C2Q8WUA4 911 aaPredicted RBP22.71■■□□□ 1.23
SMAD1-211ENST00000512019 USP6NLQ92738 828 aa22.71■■□□□ 1.23
SMAD1-211ENST00000512019 SH2B1Q9NRF2 756 aaPredicted RBP22.71■■□□□ 1.23
SMAD1-211ENST00000512019 FBXO28Q9NVF7 368 aa22.71■■□□□ 1.23
SMAD1-211ENST00000512019 DHX16O60231 1041 aaKnown RBP22.7■■□□□ 1.22
SMAD1-211ENST00000512019 PFKFB2O60825 505 aa22.7■■□□□ 1.22
SMAD1-211ENST00000512019 MAPK4P31152 587 aa22.7■■□□□ 1.22
SMAD1-211ENST00000512019 DSG3P32926 999 aa22.7■■□□□ 1.22
SMAD1-211ENST00000512019 STK3Q13188 491 aa22.7■■□□□ 1.22
SMAD1-211ENST00000512019 ME3Q16798 604 aa22.7■■□□□ 1.22
SMAD1-211ENST00000512019 SAMD1Q6SPF0 538 aaPredicted RBP22.7■■□□□ 1.22
SMAD1-211ENST00000512019 TMTC3Q6ZXV5 915 aa22.7■■□□□ 1.22
SMAD1-211ENST00000512019 SOCS4Q8WXH5 440 aa22.7■■□□□ 1.22
SMAD1-211ENST00000512019 KIFC2Q96AC6 838 aa22.7■■□□□ 1.22
SMAD1-211ENST00000512019 PARP14Q460N5 1801 aa22.7■■□□□ 1.22
SMAD1-211ENST00000512019 RLFQ13129 1914 aa22.69■■□□□ 1.22
SMAD1-211ENST00000512019 SPDYE16A6NNV3 312 aaPredicted RBP22.69■■□□□ 1.22
SMAD1-211ENST00000512019 FDX1P10109 184 aa22.69■■□□□ 1.22
SMAD1-211ENST00000512019 SMARCA1P28370 1054 aa22.69■■□□□ 1.22
SMAD1-211ENST00000512019 SLC16A2P36021 539 aa22.69■■□□□ 1.22
SMAD1-211ENST00000512019 CCT2P78371 535 aaKnown RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms