RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 ASMTLO95671 621 aa5.74□□□□□ -1.49
TRAPPC11-208ENST00000511955 SLC4A1P02730 911 aa5.74□□□□□ -1.49
TRAPPC11-208ENST00000511955 MYCLP1P12525 358 aaPredicted RBP5.74□□□□□ -1.49
TRAPPC11-208ENST00000511955 EIF2S2P20042 333 aaKnown RBP5.74□□□□□ -1.49
TRAPPC11-208ENST00000511955 SMARCA1P28370 1054 aa5.74□□□□□ -1.49
TRAPPC11-208ENST00000511955 DDIT3P35638 169 aa5.74□□□□□ -1.49
TRAPPC11-208ENST00000511955 BCAMP50895 628 aa5.74□□□□□ -1.49
TRAPPC11-208ENST00000511955 EVX2Q03828 476 aa5.74□□□□□ -1.49
TRAPPC11-208ENST00000511955 ARMC4Q5T2S8 1044 aa5.74□□□□□ -1.49
TRAPPC11-208ENST00000511955 TTLL5Q6EMB2 1281 aa5.74□□□□□ -1.49
TRAPPC11-208ENST00000511955 CTR9Q6PD62 1173 aa5.74□□□□□ -1.49
TRAPPC11-208ENST00000511955 AMIGO3Q86WK7 504 aa5.74□□□□□ -1.49
TRAPPC11-208ENST00000511955 PLPP7Q8NBV4 271 aa5.74□□□□□ -1.49
TRAPPC11-208ENST00000511955 ATXN2LQ8WWM7 1075 aaKnown RBP5.74□□□□□ -1.49
TRAPPC11-208ENST00000511955 MTMR8Q96EF0 704 aa5.74□□□□□ -1.49
TRAPPC11-208ENST00000511955 EPB41L4AQ9HCS5 686 aaPredicted RBP5.74□□□□□ -1.49
TRAPPC11-208ENST00000511955 OBP2AQ9NY56 170 aa5.74□□□□□ -1.49
TRAPPC11-208ENST00000511955 STK32BQ9NY57 414 aa5.74□□□□□ -1.49
TRAPPC11-208ENST00000511955 C6orf203Q9P0P8 240 aaPredicted RBP5.74□□□□□ -1.49
TRAPPC11-208ENST00000511955 GTF2IRD1Q9UHL9 959 aa5.74□□□□□ -1.49
TRAPPC11-208ENST00000511955 ZNF180Q9UJW8 692 aa5.74□□□□□ -1.49
TRAPPC11-208ENST00000511955 SLC4A7Q9Y6M7 1214 aa5.74□□□□□ -1.49
TRAPPC11-208ENST00000511955 IL16Q14005 1332 aa5.74□□□□□ -1.49
TRAPPC11-208ENST00000511955 DLG5Q8TDM6 1919 aa5.74□□□□□ -1.49
TRAPPC11-208ENST00000511955 SCN11AQ9UI33 1791 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 hCG_1642624A0A1W2PR95 340 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 RTCAO00442 366 aaKnown RBP5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 CCP110O43303 1012 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 LETM1O95202 739 aaPredicted RBP5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 MBD4O95243 580 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 KRT10P13645 584 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 HOXD10P28358 340 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 PMLP29590 882 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 STAT3P40763 770 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 PFKPQ01813 784 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 APBA1Q02410 837 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 TUSC1Q2TAM9 212 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 IRGCQ6NXR0 463 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 XRRA1Q6P2D8 792 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 KLHL23Q8NBE8 558 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 ERCC4Q92889 916 aaPredicted RBP5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 JAKMIP2Q96AA8 810 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 GSDMAQ96QA5 445 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 CFAP45Q9UL16 551 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 USP16Q9Y5T5 823 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 J3KRW8 73 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 IRS4O14654 1257 aaPredicted RBP5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 TMCC2O75069 709 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 TMEM127O75204 238 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 A1BGP04217 495 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 IFIT1P09914 478 aaKnown RBP5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 MYL6BP14649 208 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 CRKLP46109 303 aaKnown RBP5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 RXRGP48443 463 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 NASPP49321 788 aaPredicted RBP5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 RCAN1P53805 252 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 PLIN5Q00G26 463 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 ATP2B2Q01814 1243 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 NR1H3Q13133 447 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 EIF2B5Q13144 721 aaKnown RBP5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 KIF22Q14807 665 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 NFKBIBQ15653 356 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 SLC15A2Q16348 729 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 SLC27A3Q5K4L6 730 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 DACT2Q5SW24 774 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 OTOP3Q7RTS5 596 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 ERC1Q8IUD2 1116 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 TAB3Q8N5C8 712 aaPredicted RBP5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 PI4K2BQ8TCG2 481 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 FBF1Q8TES7 1133 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 C17orf50Q8WW18 174 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 SARGQ9BW04 601 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 GTPBP4Q9BZE4 634 aaKnown RBP5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 CCDC8Q9H0W5 538 aaPredicted RBP5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 ZCCHC17Q9NP64 241 aaKnown RBP5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 MBIPQ9NS73 344 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 BLOC1S4Q9NUP1 217 aa5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 PA2G4Q9UQ80 394 aaKnown RBP5.73□□□□□ -1.49
TRAPPC11-208ENST00000511955 PLEKHG2Q9H7P9 1386 aa5.72□□□□□ -1.49
TRAPPC11-208ENST00000511955 RASA4BC9J798 803 aa5.72□□□□□ -1.49
TRAPPC11-208ENST00000511955 K7ENM7 598 aa5.72□□□□□ -1.49
TRAPPC11-208ENST00000511955 STXBP3O00186 592 aa5.72□□□□□ -1.49
TRAPPC11-208ENST00000511955 RASA4O43374 803 aa5.72□□□□□ -1.49
TRAPPC11-208ENST00000511955 ANXA1P04083 346 aa5.72□□□□□ -1.49
TRAPPC11-208ENST00000511955 MRPS35P82673 323 aaKnown RBP5.72□□□□□ -1.49
TRAPPC11-208ENST00000511955 PLCB3Q01970 1234 aa5.72□□□□□ -1.49
TRAPPC11-208ENST00000511955 MTMR1Q13613 665 aa5.72□□□□□ -1.49
TRAPPC11-208ENST00000511955 TRIM14Q14142 442 aa5.72□□□□□ -1.49
TRAPPC11-208ENST00000511955 DSC3Q14574 896 aa5.72□□□□□ -1.49
TRAPPC11-208ENST00000511955 WTAPQ15007 396 aa5.72□□□□□ -1.49
TRAPPC11-208ENST00000511955 ERFEQ4G0M1 354 aa5.72□□□□□ -1.49
TRAPPC11-208ENST00000511955 GALNT5Q7Z7M9 940 aa5.72□□□□□ -1.49
TRAPPC11-208ENST00000511955 PLEKHM2Q8IWE5 1019 aa5.72□□□□□ -1.49
TRAPPC11-208ENST00000511955 TEX9Q8N6V9 391 aa5.72□□□□□ -1.49
TRAPPC11-208ENST00000511955 AFAP1L1Q8TED9 768 aa5.72□□□□□ -1.49
TRAPPC11-208ENST00000511955 THAP11Q96EK4 314 aa5.72□□□□□ -1.49
TRAPPC11-208ENST00000511955 CDCA7LQ96GN5 454 aa5.72□□□□□ -1.49
TRAPPC11-208ENST00000511955 ALG13Q9NP73 1137 aaKnown RBP5.72□□□□□ -1.49
TRAPPC11-208ENST00000511955 CCDC87Q9NVE4 849 aa5.72□□□□□ -1.49
TRAPPC11-208ENST00000511955 TMOD4Q9NZQ9 345 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms