RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 PPP2R2DQ66LE6 453 aa15.89■□□□□ 0.13
POLR2J3-216ENST00000511773 NOL8Q76FK4 1167 aaKnown RBP15.89■□□□□ 0.13
POLR2J3-216ENST00000511773 STK11IPQ8N1F8 1099 aa15.89■□□□□ 0.13
POLR2J3-216ENST00000511773 ANKRD35Q8N283 1001 aa15.89■□□□□ 0.13
POLR2J3-216ENST00000511773 RHPN1Q8TCX5 695 aa15.89■□□□□ 0.13
POLR2J3-216ENST00000511773 HIPK3Q9H422 1215 aa15.89■□□□□ 0.13
POLR2J3-216ENST00000511773 CTDP1Q9Y5B0 961 aaPredicted RBP15.89■□□□□ 0.13
POLR2J3-216ENST00000511773 CD4P01730 458 aa15.88■□□□□ 0.13
POLR2J3-216ENST00000511773 IFIT2P09913 472 aaKnown RBP15.88■□□□□ 0.13
POLR2J3-216ENST00000511773 MYOGP15173 224 aa15.88■□□□□ 0.13
POLR2J3-216ENST00000511773 ADD2P35612 726 aa15.88■□□□□ 0.13
POLR2J3-216ENST00000511773 CCL23P55773 120 aa15.88■□□□□ 0.13
POLR2J3-216ENST00000511773 CXCL17Q6UXB2 119 aa15.88■□□□□ 0.13
POLR2J3-216ENST00000511773 ARMCX2Q7L311 632 aa15.88■□□□□ 0.13
POLR2J3-216ENST00000511773 ZNF467Q7Z7K2 595 aaPredicted RBP15.88■□□□□ 0.13
POLR2J3-216ENST00000511773 KIFC2Q96AC6 838 aa15.88■□□□□ 0.13
POLR2J3-216ENST00000511773 FGD4Q96M96 766 aa15.88■□□□□ 0.13
POLR2J3-216ENST00000511773 ABHD16BQ9H3Z7 469 aa15.88■□□□□ 0.13
POLR2J3-216ENST00000511773 RAVER2Q9HCJ3 691 aaKnown RBP15.88■□□□□ 0.13
POLR2J3-216ENST00000511773 HOMER2Q9NSB8 354 aa15.88■□□□□ 0.13
POLR2J3-216ENST00000511773 PAG1Q9NWQ8 432 aa15.88■□□□□ 0.13
POLR2J3-216ENST00000511773 SLC4A4Q9Y6R1 1079 aa15.88■□□□□ 0.13
POLR2J3-216ENST00000511773 CTAGE5O15320 804 aa15.87■□□□□ 0.13
POLR2J3-216ENST00000511773 ZBED4O75132 1171 aa15.87■□□□□ 0.13
POLR2J3-216ENST00000511773 NDUFB10O96000 172 aa15.87■□□□□ 0.13
POLR2J3-216ENST00000511773 KCNQ1P51787 676 aa15.87■□□□□ 0.13
POLR2J3-216ENST00000511773 CTR9Q6PD62 1173 aa15.87■□□□□ 0.13
POLR2J3-216ENST00000511773 CLASRPQ8N2M8 674 aaKnown RBP15.87■□□□□ 0.13
POLR2J3-216ENST00000511773 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.87■□□□□ 0.13
POLR2J3-216ENST00000511773 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.87■□□□□ 0.13
POLR2J3-216ENST00000511773 MYH7P12883 1935 aa15.87■□□□□ 0.13
POLR2J3-216ENST00000511773 GREB1LQ9C091 1923 aaPredicted RBP15.87■□□□□ 0.13
POLR2J3-216ENST00000511773 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.86■□□□□ 0.13
POLR2J3-216ENST00000511773 ZBBXA8MT70 800 aa15.86■□□□□ 0.13
POLR2J3-216ENST00000511773 F5H6K3 240 aa15.86■□□□□ 0.13
POLR2J3-216ENST00000511773 BMP1P13497 986 aa15.86■□□□□ 0.13
POLR2J3-216ENST00000511773 PTGS1P23219 599 aa15.86■□□□□ 0.13
POLR2J3-216ENST00000511773 KLRC3Q07444 240 aa15.86■□□□□ 0.13
POLR2J3-216ENST00000511773 HSP90AB4PQ58FF6 505 aa15.86■□□□□ 0.13
POLR2J3-216ENST00000511773 CCDC144CPQ8IYA2 1237 aa15.86■□□□□ 0.13
POLR2J3-216ENST00000511773 PRPF38AQ8NAV1 312 aaKnown RBP15.86■□□□□ 0.13
POLR2J3-216ENST00000511773 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.86■□□□□ 0.13
POLR2J3-216ENST00000511773 C1QTNF1Q9BXJ1 281 aa15.86■□□□□ 0.13
POLR2J3-216ENST00000511773 BOLA2Q9H3K6 86 aa15.86■□□□□ 0.13
POLR2J3-216ENST00000511773 MYH4Q9Y623 1939 aa15.86■□□□□ 0.13
POLR2J3-216ENST00000511773 PRRC2BQ5JSZ5 2229 aaKnown RBP15.86■□□□□ 0.13
POLR2J3-216ENST00000511773 CNTN2Q02246 1040 aa15.85■□□□□ 0.13
POLR2J3-216ENST00000511773 TNFAIP2Q03169 654 aa15.85■□□□□ 0.13
POLR2J3-216ENST00000511773 TRPV6Q9H1D0 765 aa15.85■□□□□ 0.13
POLR2J3-216ENST00000511773 WNT8AQ9H1J5 351 aa15.85■□□□□ 0.13
POLR2J3-216ENST00000511773 SLC4A7Q9Y6M7 1214 aa15.85■□□□□ 0.13
POLR2J3-216ENST00000511773 B4GALT4O60513 344 aa15.84■□□□□ 0.13
POLR2J3-216ENST00000511773 ITGA7Q13683 1181 aa15.84■□□□□ 0.13
POLR2J3-216ENST00000511773 FSCN1Q16658 493 aaKnown RBP15.84■□□□□ 0.13
POLR2J3-216ENST00000511773 AAK1Q2M2I8 961 aa15.84■□□□□ 0.13
POLR2J3-216ENST00000511773 TLK2Q86UE8 772 aa15.84■□□□□ 0.13
POLR2J3-216ENST00000511773 SCLYQ96I15 445 aa15.84■□□□□ 0.13
POLR2J3-216ENST00000511773 NOC4LQ9BVI4 516 aaKnown RBP15.84■□□□□ 0.13
POLR2J3-216ENST00000511773 KATNBL1Q9H079 304 aa15.84■□□□□ 0.13
POLR2J3-216ENST00000511773 CERS4Q9HA82 394 aa15.84■□□□□ 0.13
POLR2J3-216ENST00000511773 MKNK2Q9HBH9 465 aa15.84■□□□□ 0.13
POLR2J3-216ENST00000511773 SLC38A10Q9HBR0 1119 aa15.84■□□□□ 0.13
POLR2J3-216ENST00000511773 ARPP21Q9UBL0 812 aaPredicted RBP15.84■□□□□ 0.13
POLR2J3-216ENST00000511773 CLIP2Q9UDT6 1046 aa15.84■□□□□ 0.13
POLR2J3-216ENST00000511773 FBXO40Q9UH90 709 aa15.84■□□□□ 0.13
POLR2J3-216ENST00000511773 ISY1Q9ULR0 285 aaKnown RBP15.84■□□□□ 0.13
POLR2J3-216ENST00000511773 DDX49Q9Y6V7 483 aaKnown RBP15.84■□□□□ 0.13
POLR2J3-216ENST00000511773 ASTN1O14525 1302 aa15.84■□□□□ 0.13
POLR2J3-216ENST00000511773 ZBED9Q6R2W3 1325 aa15.84■□□□□ 0.13
POLR2J3-216ENST00000511773 LRRC37A2A6NM11 1700 aa15.83■□□□□ 0.13
POLR2J3-216ENST00000511773 RFXAPO00287 272 aa15.83■□□□□ 0.12
POLR2J3-216ENST00000511773 ATP2A1O14983 1001 aa15.83■□□□□ 0.12
POLR2J3-216ENST00000511773 ATP2A2P16615 1042 aaKnown RBP15.83■□□□□ 0.12
POLR2J3-216ENST00000511773 RASA1P20936 1047 aa15.83■□□□□ 0.12
POLR2J3-216ENST00000511773 PSMC6P62333 389 aa15.83■□□□□ 0.12
POLR2J3-216ENST00000511773 SLC43A3Q8NBI5 491 aa15.83■□□□□ 0.12
POLR2J3-216ENST00000511773 CHST13Q8NET6 341 aa15.83■□□□□ 0.12
POLR2J3-216ENST00000511773 KIF1BPQ96EK5 621 aa15.83■□□□□ 0.12
POLR2J3-216ENST00000511773 PUS7LQ9H0K6 701 aaKnown RBP15.83■□□□□ 0.12
POLR2J3-216ENST00000511773 AP5M1Q9H0R1 490 aa15.83■□□□□ 0.12
POLR2J3-216ENST00000511773 NYAP2Q9P242 653 aa15.83■□□□□ 0.12
POLR2J3-216ENST00000511773 PCDHA11Q9Y5I1 949 aa15.83■□□□□ 0.12
POLR2J3-216ENST00000511773 GRIN2DO15399 1336 aa15.83■□□□□ 0.12
POLR2J3-216ENST00000511773 HOXD11P31277 338 aaPredicted RBP15.82■□□□□ 0.12
POLR2J3-216ENST00000511773 UBE3CQ15386 1083 aa15.82■□□□□ 0.12
POLR2J3-216ENST00000511773 LRRC47Q8N1G4 583 aaKnown RBP15.82■□□□□ 0.12
POLR2J3-216ENST00000511773 CHMP4CQ96CF2 233 aa15.82■□□□□ 0.12
POLR2J3-216ENST00000511773 HCN4Q9Y3Q4 1203 aa15.82■□□□□ 0.12
POLR2J3-216ENST00000511773 MINDY4BA8MYZ0 360 aa15.81■□□□□ 0.12
POLR2J3-216ENST00000511773 ERC2O15083 957 aa15.81■□□□□ 0.12
POLR2J3-216ENST00000511773 DYNC1LI2O43237 492 aaPredicted RBP15.81■□□□□ 0.12
POLR2J3-216ENST00000511773 GTPBP6O43824 516 aaPredicted RBP15.81■□□□□ 0.12
POLR2J3-216ENST00000511773 CABYRO75952 493 aa15.81■□□□□ 0.12
POLR2J3-216ENST00000511773 CA3P07451 260 aa15.81■□□□□ 0.12
POLR2J3-216ENST00000511773 NKX3-2P78367 333 aa15.81■□□□□ 0.12
POLR2J3-216ENST00000511773 TTLL4Q14679 1199 aa15.81■□□□□ 0.12
POLR2J3-216ENST00000511773 KRT40Q6A162 431 aa15.81■□□□□ 0.12
POLR2J3-216ENST00000511773 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.81■□□□□ 0.12
POLR2J3-216ENST00000511773 EEPD1Q7L9B9 569 aa15.81■□□□□ 0.12
POLR2J3-216ENST00000511773 DEFB128Q7Z7B8 93 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms