RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 FAM160A1Q05DH4 1040 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 PPP2R5AQ15172 486 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 TBCCQ15814 346 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 PCDHB13Q9Y5F0 798 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 ROBO2Q9HCK4 1378 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 SLC4A1P02730 911 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 DNM1Q05193 864 aaKnown RBP6.35□□□□□ -1.39
USP38-203ENST00000511739 TTC38Q5R3I4 469 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 BEND3Q5T5X7 828 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 CREB3L3Q68CJ9 461 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 CROCCP2Q86T23 111 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 C10orf67Q8IYJ2 551 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 MICALL1Q8N3F8 863 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 DCLK2Q8N568 766 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 BICC1Q9H694 974 aaKnown RBP6.35□□□□□ -1.39
USP38-203ENST00000511739 ZHX1Q9UKY1 873 aaPredicted RBP6.35□□□□□ -1.39
USP38-203ENST00000511739 ELP1O95163 1332 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 ZBBXA8MT70 800 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 F13A1P00488 732 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 MKRN3Q13064 507 aaKnown RBP6.35□□□□□ -1.39
USP38-203ENST00000511739 TRIM14Q14142 442 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 DOK7Q18PE1 504 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 ANKRD20A3Q5VUR7 823 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 C8orf74Q6P047 294 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 PNMA8AQ86V59 439 aaPredicted RBP6.35□□□□□ -1.39
USP38-203ENST00000511739 VSIG1Q86XK7 387 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 SYCE1Q8N0S2 351 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 PLBD2Q8NHP8 589 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 USP26Q9BXU7 913 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 ABCF3Q9NUQ8 709 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.35□□□□□ -1.39
USP38-203ENST00000511739 IFNKQ9P0W0 207 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 SLC13A4Q9UKG4 626 aa6.35□□□□□ -1.39
USP38-203ENST00000511739 A6NJR5 290 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 WDR64B1ANS9 1081 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 PPP1R12AO14974 1030 aaPredicted RBP6.34□□□□□ -1.39
USP38-203ENST00000511739 CEP104O60308 925 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 CAPN2P17655 700 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 TIMM10P62072 90 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.34□□□□□ -1.39
USP38-203ENST00000511739 ZNF772Q68DY9 489 aaPredicted RBP6.34□□□□□ -1.39
USP38-203ENST00000511739 REXO1Q8N1G1 1221 aaKnown RBP6.34□□□□□ -1.39
USP38-203ENST00000511739 FAM71BQ8TC56 605 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 LPIN2Q92539 896 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 SDCCAG3Q96C92 435 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 NACC1Q96RE7 527 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 KRT12Q99456 494 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 C1orf112Q9NSG2 853 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 TUBBP07437 444 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 ANXA13P27216 316 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 CYP2J2P51589 502 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 EPHB1P54762 984 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 TFAP4Q01664 338 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 CERKLQ49MI3 558 aaPredicted RBP6.34□□□□□ -1.39
USP38-203ENST00000511739 RNF219Q5W0B1 726 aaPredicted RBP6.34□□□□□ -1.39
USP38-203ENST00000511739 MCTP2Q6DN12 878 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 ELMOD1Q8N336 334 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 P3H4Q92791 437 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 JPH2Q9BR39 696 aaPredicted RBP6.34□□□□□ -1.39
USP38-203ENST00000511739 NT5C3AQ9H0P0 336 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 QTRT2Q9H974 415 aaKnown RBP6.34□□□□□ -1.39
USP38-203ENST00000511739 RIC8AQ9NPQ8 531 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 ATP8A2Q9NTI2 1148 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 HGSO14964 777 aaPredicted RBP6.34□□□□□ -1.39
USP38-203ENST00000511739 KLHL30Q0D2K2 578 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 NLGN1Q8N2Q7 840 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 MCUQ8NE86 351 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 FAM76AQ8TAV0 307 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 MMTAG2Q9BU76 263 aaKnown RBP6.34□□□□□ -1.39
USP38-203ENST00000511739 SNX25Q9H3E2 840 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 SFMBT1Q9UHJ3 866 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 SSH2Q76I76 1423 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 RNF8O76064 485 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 ATP2B4P23634 1241 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 ECE1P42892 770 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 EFCAB13Q8IY85 973 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 SLC17A8Q8NDX2 589 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.34□□□□□ -1.39
USP38-203ENST00000511739 WHAMMQ8TF30 809 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 XAGE2Q96GT9 111 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 TTC25Q96NG3 672 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 NUP58Q9BVL2 599 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 PIDD1Q9HB75 910 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 DISC1Q9NRI5 854 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 ADD3Q9UEY8 706 aaKnown RBP6.34□□□□□ -1.39
USP38-203ENST00000511739 ATP8B3O60423 1300 aa6.34□□□□□ -1.39
USP38-203ENST00000511739 PTCH1Q13635 1447 aa6.34□□□□□ -1.4
USP38-203ENST00000511739 SRGAP2BP0DMP2 458 aa6.34□□□□□ -1.4
USP38-203ENST00000511739 CASP2P42575 452 aa6.34□□□□□ -1.4
USP38-203ENST00000511739 SCNN1DP51172 638 aa6.34□□□□□ -1.4
USP38-203ENST00000511739 RPS8P62241 208 aaKnown RBP6.34□□□□□ -1.4
USP38-203ENST00000511739 IL1RL1Q01638 556 aa6.34□□□□□ -1.4
USP38-203ENST00000511739 DMP1Q13316 513 aaPredicted RBP6.34□□□□□ -1.4
USP38-203ENST00000511739 RAB44Q7Z6P3 723 aaPredicted RBP6.34□□□□□ -1.4
USP38-203ENST00000511739 CABP7Q86V35 215 aa6.34□□□□□ -1.4
USP38-203ENST00000511739 KRT222Q8N1A0 295 aa6.34□□□□□ -1.4
USP38-203ENST00000511739 SLC10A4Q96EP9 437 aa6.34□□□□□ -1.4
USP38-203ENST00000511739 ERBB4Q15303 1308 aa6.34□□□□□ -1.4
USP38-203ENST00000511739 ADGRL3Q9HAR2 1447 aa6.33□□□□□ -1.4
USP38-203ENST00000511739 TULP4Q9NRJ4 1543 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms