RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 FERMT2Q96AC1 680 aa18.11■□□□□ 0.49
COL1A1-213ENST00000511732 TOMM22Q9NS69 142 aa18.11■□□□□ 0.49
COL1A1-213ENST00000511732 HOMER2Q9NSB8 354 aa18.11■□□□□ 0.49
COL1A1-213ENST00000511732 PRR12Q9ULL5 1215 aa18.11■□□□□ 0.49
COL1A1-213ENST00000511732 MTMR7Q9Y216 660 aa18.11■□□□□ 0.49
COL1A1-213ENST00000511732 SUPT16HQ9Y5B9 1047 aaKnown RBP18.11■□□□□ 0.49
COL1A1-213ENST00000511732 SYNGAP1Q96PV0 1343 aa18.11■□□□□ 0.49
COL1A1-213ENST00000511732 ADAMTS4O75173 837 aa18.1■□□□□ 0.49
COL1A1-213ENST00000511732 FDX1P10109 184 aa18.1■□□□□ 0.49
COL1A1-213ENST00000511732 AKR1A1P14550 325 aa18.1■□□□□ 0.49
COL1A1-213ENST00000511732 IKQ13123 557 aaPredicted RBP18.1■□□□□ 0.49
COL1A1-213ENST00000511732 ZNF467Q7Z7K2 595 aaPredicted RBP18.1■□□□□ 0.49
COL1A1-213ENST00000511732 TDHQ8IZJ6 230 aa18.1■□□□□ 0.49
COL1A1-213ENST00000511732 UBE2OQ9C0C9 1292 aaKnown RBP18.1■□□□□ 0.49
COL1A1-213ENST00000511732 FBXO40Q9UH90 709 aa18.1■□□□□ 0.49
COL1A1-213ENST00000511732 CNPY2Q9Y2B0 182 aa18.1■□□□□ 0.49
COL1A1-213ENST00000511732 ATP11BQ9Y2G3 1177 aa18.1■□□□□ 0.49
COL1A1-213ENST00000511732 DNAH12Q6ZR08 3092 aa18.09■□□□□ 0.49
COL1A1-213ENST00000511732 ADCY6O43306 1168 aa18.09■□□□□ 0.49
COL1A1-213ENST00000511732 CNTN2Q02246 1040 aa18.09■□□□□ 0.49
COL1A1-213ENST00000511732 TRIM60Q495X7 471 aa18.09■□□□□ 0.49
COL1A1-213ENST00000511732 TTBK2Q6IQ55 1244 aa18.09■□□□□ 0.49
COL1A1-213ENST00000511732 TBC1D10CQ8IV04 446 aa18.09■□□□□ 0.49
COL1A1-213ENST00000511732 TMEM47Q9BQJ4 181 aa18.09■□□□□ 0.49
COL1A1-213ENST00000511732 TCP11L1Q9NUJ3 509 aa18.09■□□□□ 0.49
COL1A1-213ENST00000511732 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.09■□□□□ 0.49
COL1A1-213ENST00000511732 ZHX1Q9UKY1 873 aaPredicted RBP18.09■□□□□ 0.49
COL1A1-213ENST00000511732 PHF24Q9UPV7 400 aa18.09■□□□□ 0.49
COL1A1-213ENST00000511732 IRX5P78411 483 aaPredicted RBP18.08■□□□□ 0.48
COL1A1-213ENST00000511732 ACVR2BQ13705 512 aa18.08■□□□□ 0.48
COL1A1-213ENST00000511732 AKNAD1Q5T1N1 836 aa18.08■□□□□ 0.48
COL1A1-213ENST00000511732 CCDC174Q6PII3 467 aa18.08■□□□□ 0.48
COL1A1-213ENST00000511732 CWC27Q6UX04 472 aaKnown RBP18.08■□□□□ 0.48
COL1A1-213ENST00000511732 FAM133AQ8N9E0 248 aa18.08■□□□□ 0.48
COL1A1-213ENST00000511732 TRERF1Q96PN7 1200 aa18.08■□□□□ 0.48
COL1A1-213ENST00000511732 ACAD9Q9H845 621 aa18.08■□□□□ 0.48
COL1A1-213ENST00000511732 A1CFQ9NQ94 594 aaKnown RBP18.08■□□□□ 0.48
COL1A1-213ENST00000511732 RNF146Q9NTX7 359 aa18.08■□□□□ 0.48
COL1A1-213ENST00000511732 LCTP09848 1927 aa18.08■□□□□ 0.48
COL1A1-213ENST00000511732 LAMA4Q16363 1823 aa18.07■□□□□ 0.48
COL1A1-213ENST00000511732 SYNRGQ9UMZ2 1314 aa18.07■□□□□ 0.48
COL1A1-213ENST00000511732 TOP1P11387 765 aaKnown RBP18.07■□□□□ 0.48
COL1A1-213ENST00000511732 ALAS1P13196 640 aa18.07■□□□□ 0.48
COL1A1-213ENST00000511732 SLC16A2P36021 539 aa18.07■□□□□ 0.48
COL1A1-213ENST00000511732 CCDC96Q2M329 555 aa18.07■□□□□ 0.48
COL1A1-213ENST00000511732 LRIT3Q3SXY7 679 aa18.07■□□□□ 0.48
COL1A1-213ENST00000511732 MUM1L1Q5H9M0 696 aa18.07■□□□□ 0.48
COL1A1-213ENST00000511732 C1orf53Q5VUE5 145 aa18.07■□□□□ 0.48
COL1A1-213ENST00000511732 ARMCX2Q7L311 632 aa18.07■□□□□ 0.48
COL1A1-213ENST00000511732 RNF180Q86T96 592 aa18.07■□□□□ 0.48
COL1A1-213ENST00000511732 CCDC144CPQ8IYA2 1237 aa18.07■□□□□ 0.48
COL1A1-213ENST00000511732 KLHDC9Q8NEP7 349 aa18.07■□□□□ 0.48
COL1A1-213ENST00000511732 DCAF4Q8WV16 495 aa18.07■□□□□ 0.48
COL1A1-213ENST00000511732 KATNBL1Q9H079 304 aa18.07■□□□□ 0.48
COL1A1-213ENST00000511732 FAM184BQ9ULE4 1060 aa18.07■□□□□ 0.48
COL1A1-213ENST00000511732 ASTN1O14525 1302 aa18.06■□□□□ 0.48
COL1A1-213ENST00000511732 NEDD4P46934 1319 aa18.06■□□□□ 0.48
COL1A1-213ENST00000511732 FRMPD2Q68DX3 1309 aaPredicted RBP18.06■□□□□ 0.48
COL1A1-213ENST00000511732 MYADML2A6NDP7 307 aa18.06■□□□□ 0.48
COL1A1-213ENST00000511732 SOWAHBA6NEL2 793 aa18.06■□□□□ 0.48
COL1A1-213ENST00000511732 PDE4AP27815 886 aa18.06■□□□□ 0.48
COL1A1-213ENST00000511732 BTNL9Q6UXG8 535 aa18.06■□□□□ 0.48
COL1A1-213ENST00000511732 MFSD6Q6ZSS7 791 aa18.06■□□□□ 0.48
COL1A1-213ENST00000511732 SH3RF1Q7Z6J0 888 aa18.06■□□□□ 0.48
COL1A1-213ENST00000511732 RANBP17Q9H2T7 1088 aaKnown RBP18.06■□□□□ 0.48
COL1A1-213ENST00000511732 ABHD16BQ9H3Z7 469 aa18.06■□□□□ 0.48
COL1A1-213ENST00000511732 A0A1W2PQ45 241 aaPredicted RBP18.05■□□□□ 0.48
COL1A1-213ENST00000511732 A0A1W2PQY0 241 aa18.05■□□□□ 0.48
COL1A1-213ENST00000511732 POTEB2H3BUK9 544 aa18.05■□□□□ 0.48
COL1A1-213ENST00000511732 PDHBP11177 359 aa18.05■□□□□ 0.48
COL1A1-213ENST00000511732 TKFCQ3LXA3 575 aa18.05■□□□□ 0.48
COL1A1-213ENST00000511732 CCDC144BQ3MJ40 725 aa18.05■□□□□ 0.48
COL1A1-213ENST00000511732 CCSAPQ6IQ19 270 aaPredicted RBP18.05■□□□□ 0.48
COL1A1-213ENST00000511732 IL25Q9H293 177 aa18.05■□□□□ 0.48
COL1A1-213ENST00000511732 GPCPD1Q9NPB8 672 aa18.05■□□□□ 0.48
COL1A1-213ENST00000511732 PRDM5Q9NQX1 630 aaPredicted RBP18.05■□□□□ 0.48
COL1A1-213ENST00000511732 PDLIM7Q9NR12 457 aa18.05■□□□□ 0.48
COL1A1-213ENST00000511732 DDX49Q9Y6V7 483 aaKnown RBP18.05■□□□□ 0.48
COL1A1-213ENST00000511732 LRRC37A2A6NM11 1700 aa18.05■□□□□ 0.48
COL1A1-213ENST00000511732 TRIM43BA6NCK2 446 aa18.04■□□□□ 0.48
COL1A1-213ENST00000511732 DUSP11O75319 330 aaKnown RBP18.04■□□□□ 0.48
COL1A1-213ENST00000511732 ICAM1P05362 532 aa18.04■□□□□ 0.48
COL1A1-213ENST00000511732 MFAP1P55081 439 aaKnown RBP18.04■□□□□ 0.48
COL1A1-213ENST00000511732 TLE2Q04725 743 aa18.04■□□□□ 0.48
COL1A1-213ENST00000511732 TRIM43Q96BQ3 446 aaPredicted RBP18.04■□□□□ 0.48
COL1A1-213ENST00000511732 PURBQ96QR8 312 aaKnown RBP18.04■□□□□ 0.48
COL1A1-213ENST00000511732 LBHD1Q9BQE6 289 aaPredicted RBP18.04■□□□□ 0.48
COL1A1-213ENST00000511732 ZKSCAN3Q9BRR0 538 aa18.04■□□□□ 0.48
COL1A1-213ENST00000511732 DIAPH3Q9NSV4 1193 aa18.04■□□□□ 0.48
COL1A1-213ENST00000511732 PRKAG2Q9UGJ0 569 aa18.04■□□□□ 0.48
COL1A1-213ENST00000511732 CCPG1Q9ULG6 757 aa18.04■□□□□ 0.48
COL1A1-213ENST00000511732 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.03■□□□□ 0.48
COL1A1-213ENST00000511732 ZNF213O14771 459 aa18.03■□□□□ 0.48
COL1A1-213ENST00000511732 SNHG28P0DPA3 235 aa18.03■□□□□ 0.48
COL1A1-213ENST00000511732 PCP11498 1178 aaKnown RBP18.03■□□□□ 0.48
COL1A1-213ENST00000511732 ITGB8P26012 769 aa18.03■□□□□ 0.48
COL1A1-213ENST00000511732 ACLYP53396 1101 aa18.03■□□□□ 0.48
COL1A1-213ENST00000511732 IRX6P78412 446 aaPredicted RBP18.03■□□□□ 0.48
COL1A1-213ENST00000511732 KCNA10Q16322 511 aa18.03■□□□□ 0.48
COL1A1-213ENST00000511732 SYDE2Q5VT97 1194 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms