RNA–Protein interactions for RNA: ENST00000511677.1

AP003716.1-202, humanhuman

TSL 2 BASIC

Gene AP003716.1, Length 3,387 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003716.1-202ENST00000511677 SRGNP10124 158 aa11.03□□□□□ -0.64
AP003716.1-202ENST00000511677 EEF1GP26641 437 aaKnown RBP11.03□□□□□ -0.64
AP003716.1-202ENST00000511677 HERVK_113P62684 666 aa11.03□□□□□ -0.64
AP003716.1-202ENST00000511677 GRAPQ13588 217 aa11.03□□□□□ -0.64
AP003716.1-202ENST00000511677 TRAPPC11Q7Z392 1133 aa11.03□□□□□ -0.64
AP003716.1-202ENST00000511677 CCDC82Q8N4S0 544 aa11.03□□□□□ -0.64
AP003716.1-202ENST00000511677 GRAPLQ8TC17 118 aaPredicted RBP11.03□□□□□ -0.64
AP003716.1-202ENST00000511677 MTMR8Q96EF0 704 aa11.03□□□□□ -0.64
AP003716.1-202ENST00000511677 DESI2Q9BSY9 194 aa11.03□□□□□ -0.64
AP003716.1-202ENST00000511677 ABCF2Q9UG63 623 aa11.03□□□□□ -0.64
AP003716.1-202ENST00000511677 SRP68Q9UHB9 627 aaKnown RBP11.03□□□□□ -0.64
AP003716.1-202ENST00000511677 TTF2Q9UNY4 1162 aaKnown RBP11.03□□□□□ -0.64
AP003716.1-202ENST00000511677 MYO3BQ8WXR4 1341 aa11.03□□□□□ -0.64
AP003716.1-202ENST00000511677 H7C1D1 291 aa11.02□□□□□ -0.64
AP003716.1-202ENST00000511677 NRDCO43847 1150 aa11.02□□□□□ -0.64
AP003716.1-202ENST00000511677 ONECUT3O60422 494 aaPredicted RBP11.02□□□□□ -0.64
AP003716.1-202ENST00000511677 TXLNAP40222 546 aa11.02□□□□□ -0.64
AP003716.1-202ENST00000511677 SPAG1Q07617 926 aa11.02□□□□□ -0.64
AP003716.1-202ENST00000511677 BEND6Q5SZJ8 279 aaPredicted RBP11.02□□□□□ -0.64
AP003716.1-202ENST00000511677 CERS3Q8IU89 383 aa11.02□□□□□ -0.64
AP003716.1-202ENST00000511677 TMTC1Q8IUR5 882 aa11.02□□□□□ -0.64
AP003716.1-202ENST00000511677 PNMA1Q8ND90 353 aa11.02□□□□□ -0.64
AP003716.1-202ENST00000511677 AK8Q96MA6 479 aa11.02□□□□□ -0.64
AP003716.1-202ENST00000511677 LZTS2Q9BRK4 669 aa11.02□□□□□ -0.64
AP003716.1-202ENST00000511677 RMND1Q9NWS8 449 aa11.02□□□□□ -0.64
AP003716.1-202ENST00000511677 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.02□□□□□ -0.64
AP003716.1-202ENST00000511677 CDC23Q9UJX2 597 aa11.02□□□□□ -0.64
AP003716.1-202ENST00000511677 HOXA7P31268 230 aaPredicted RBP11.02□□□□□ -0.65
AP003716.1-202ENST00000511677 CTCFLQ8NI51 663 aaPredicted RBP11.02□□□□□ -0.65
AP003716.1-202ENST00000511677 GDAQ9Y2T3 454 aa11.02□□□□□ -0.65
AP003716.1-202ENST00000511677 PARP14Q460N5 1801 aa11.02□□□□□ -0.65
AP003716.1-202ENST00000511677 LOC285556D6RIA3 1793 aa11.02□□□□□ -0.65
AP003716.1-202ENST00000511677 CCDC151A5D8V7 595 aa11.02□□□□□ -0.65
AP003716.1-202ENST00000511677 KCNJ18B7U540 433 aa11.02□□□□□ -0.65
AP003716.1-202ENST00000511677 CASQ1P31415 396 aa11.02□□□□□ -0.65
AP003716.1-202ENST00000511677 KIF5BP33176 963 aa11.02□□□□□ -0.65
AP003716.1-202ENST00000511677 AFMP43652 599 aa11.02□□□□□ -0.65
AP003716.1-202ENST00000511677 KCNJ12Q14500 433 aa11.02□□□□□ -0.65
AP003716.1-202ENST00000511677 PAPD7Q5XG87 772 aaKnown RBP11.02□□□□□ -0.65
AP003716.1-202ENST00000511677 MB21D1Q8N884 522 aa11.02□□□□□ -0.65
AP003716.1-202ENST00000511677 NEDD1Q8NHV4 660 aa11.02□□□□□ -0.65
AP003716.1-202ENST00000511677 NELFBQ8WX92 580 aa11.02□□□□□ -0.65
AP003716.1-202ENST00000511677 TMEM47Q9BQJ4 181 aa11.02□□□□□ -0.65
AP003716.1-202ENST00000511677 BRMS1Q9HCU9 246 aa11.02□□□□□ -0.65
AP003716.1-202ENST00000511677 SPTY2D1Q68D10 685 aaPredicted RBP11.01□□□□□ -0.65
AP003716.1-202ENST00000511677 WDR93Q6P2C0 686 aa11.01□□□□□ -0.65
AP003716.1-202ENST00000511677 ERGIC2Q96RQ1 377 aa11.01□□□□□ -0.65
AP003716.1-202ENST00000511677 PARD6BQ9BYG5 372 aa11.01□□□□□ -0.65
AP003716.1-202ENST00000511677 FER1L6Q2WGJ9 1857 aa11.01□□□□□ -0.65
AP003716.1-202ENST00000511677 NKRFO15226 690 aaKnown RBP eCLIP11.01□□□□□ -0.65
AP003716.1-202ENST00000511677 TUBB4BP68371 445 aa11.01□□□□□ -0.65
AP003716.1-202ENST00000511677 WDR66Q8TBY9 1149 aa11.01□□□□□ -0.65
AP003716.1-202ENST00000511677 BLZF1Q9H2G9 400 aa11.01□□□□□ -0.65
AP003716.1-202ENST00000511677 PSD3Q9NYI0 1048 aa11.01□□□□□ -0.65
AP003716.1-202ENST00000511677 hCG_1984214I3L0E3 225 aa11□□□□□ -0.65
AP003716.1-202ENST00000511677 PARP1P09874 1014 aaKnown RBP11□□□□□ -0.65
AP003716.1-202ENST00000511677 HOXA10P31260 410 aaPredicted RBP11□□□□□ -0.65
AP003716.1-202ENST00000511677 BRD3Q15059 726 aa11□□□□□ -0.65
AP003716.1-202ENST00000511677 HYIQ5T013 277 aa11□□□□□ -0.65
AP003716.1-202ENST00000511677 ZNF713Q8N859 430 aaPredicted RBP11□□□□□ -0.65
AP003716.1-202ENST00000511677 ARHGEF1Q92888 912 aaKnown RBP11□□□□□ -0.65
AP003716.1-202ENST00000511677 PNKPQ96T60 521 aa11□□□□□ -0.65
AP003716.1-202ENST00000511677 BLOC1S4Q9NUP1 217 aa11□□□□□ -0.65
AP003716.1-202ENST00000511677 GNAQP50148 359 aa11□□□□□ -0.65
AP003716.1-202ENST00000511677 FXR2P51116 673 aaKnown RBP eCLIP11□□□□□ -0.65
AP003716.1-202ENST00000511677 TMEM119Q4V9L6 283 aa11□□□□□ -0.65
AP003716.1-202ENST00000511677 HSP90AA4PQ58FG1 418 aa11□□□□□ -0.65
AP003716.1-202ENST00000511677 DPY19L2P1Q6NXN4 242 aa11□□□□□ -0.65
AP003716.1-202ENST00000511677 NOC3LQ8WTT2 800 aaKnown RBP11□□□□□ -0.65
AP003716.1-202ENST00000511677 DHTKD1Q96HY7 919 aaPredicted RBP11□□□□□ -0.65
AP003716.1-202ENST00000511677 TRIM9Q9C026 710 aa11□□□□□ -0.65
AP003716.1-202ENST00000511677 TFCP2L1Q9NZI6 479 aa11□□□□□ -0.65
AP003716.1-202ENST00000511677 CDC25AP30304 524 aa11□□□□□ -0.65
AP003716.1-202ENST00000511677 GNG11P61952 73 aa11□□□□□ -0.65
AP003716.1-202ENST00000511677 TFAP4Q01664 338 aa11□□□□□ -0.65
AP003716.1-202ENST00000511677 JAKMIP3Q5VZ66 844 aa11□□□□□ -0.65
AP003716.1-202ENST00000511677 CENPPQ6IPU0 288 aa11□□□□□ -0.65
AP003716.1-202ENST00000511677 CYP26C1Q6V0L0 522 aa11□□□□□ -0.65
AP003716.1-202ENST00000511677 SMIM5Q71RC9 77 aa11□□□□□ -0.65
AP003716.1-202ENST00000511677 KIAA0895Q8NCT3 520 aa11□□□□□ -0.65
AP003716.1-202ENST00000511677 CRYGNQ8WXF5 182 aa11□□□□□ -0.65
AP003716.1-202ENST00000511677 GPKOWQ92917 476 aaPredicted RBP eCLIP11□□□□□ -0.65
AP003716.1-202ENST00000511677 DYNLL2Q96FJ2 89 aa11□□□□□ -0.65
AP003716.1-202ENST00000511677 NLRP3Q96P20 1036 aa11□□□□□ -0.65
AP003716.1-202ENST00000511677 EPC1Q9H2F5 836 aa11□□□□□ -0.65
AP003716.1-202ENST00000511677 L1RE1Q9UN81 338 aa11□□□□□ -0.65
AP003716.1-202ENST00000511677 SIK3Q9Y2K2 1263 aa11□□□□□ -0.65
AP003716.1-202ENST00000511677 COL2A1P02458 1487 aaPredicted RBP11□□□□□ -0.65
AP003716.1-202ENST00000511677 KARSQ15046 597 aaKnown RBP10.99□□□□□ -0.65
AP003716.1-202ENST00000511677 ASTE1Q2TB18 679 aaPredicted RBP10.99□□□□□ -0.65
AP003716.1-202ENST00000511677 ZCWPW2Q504Y3 356 aa10.99□□□□□ -0.65
AP003716.1-202ENST00000511677 ACRBPQ8NEB7 543 aa10.99□□□□□ -0.65
AP003716.1-202ENST00000511677 PNMA5Q96PV4 448 aa10.99□□□□□ -0.65
AP003716.1-202ENST00000511677 TTC26A0AVF1 554 aa10.99□□□□□ -0.65
AP003716.1-202ENST00000511677 USP17L3A6NCW0 530 aa10.99□□□□□ -0.65
AP003716.1-202ENST00000511677 USP17L4A6NCW7 530 aa10.99□□□□□ -0.65
AP003716.1-202ENST00000511677 PP2D1A8MPX8 630 aa10.99□□□□□ -0.65
AP003716.1-202ENST00000511677 URI1O94763 535 aaPredicted RBP10.99□□□□□ -0.65
AP003716.1-202ENST00000511677 SEC31AO94979 1220 aaKnown RBP10.99□□□□□ -0.65
AP003716.1-202ENST00000511677 STX17P56962 302 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms