RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 NCAPG2Q86XI2 1143 aa15.94■□□□□ 0.14
CLDND1-224ENST00000511667 NRBP1Q9UHY1 535 aa15.94■□□□□ 0.14
CLDND1-224ENST00000511667 PIEZO1Q92508 2521 aa15.94■□□□□ 0.14
CLDND1-224ENST00000511667 SNHG28P0DPA3 235 aa15.93■□□□□ 0.14
CLDND1-224ENST00000511667 PLS1Q14651 629 aa15.93■□□□□ 0.14
CLDND1-224ENST00000511667 DPP9Q86TI2 863 aa15.93■□□□□ 0.14
CLDND1-224ENST00000511667 ANKS1AQ92625 1134 aa15.93■□□□□ 0.14
CLDND1-224ENST00000511667 TTC14Q96N46 770 aa15.93■□□□□ 0.14
CLDND1-224ENST00000511667 CWC22Q9HCG8 908 aaKnown RBP15.93■□□□□ 0.14
CLDND1-224ENST00000511667 SLC5A4Q9NY91 659 aa15.93■□□□□ 0.14
CLDND1-224ENST00000511667 DDX20Q9UHI6 824 aaKnown RBP15.93■□□□□ 0.14
CLDND1-224ENST00000511667 SYNGAP1Q96PV0 1343 aa15.93■□□□□ 0.14
CLDND1-224ENST00000511667 RANBP6O60518 1105 aaKnown RBP15.92■□□□□ 0.14
CLDND1-224ENST00000511667 MSCO60682 206 aa15.92■□□□□ 0.14
CLDND1-224ENST00000511667 SHHQ15465 462 aa15.92■□□□□ 0.14
CLDND1-224ENST00000511667 SNRNP48Q6IEG0 339 aaKnown RBP15.92■□□□□ 0.14
CLDND1-224ENST00000511667 MAMDC4Q6UXC1 1216 aa15.92■□□□□ 0.14
CLDND1-224ENST00000511667 FAM160B2Q86V87 743 aa15.92■□□□□ 0.14
CLDND1-224ENST00000511667 MSL3Q8N5Y2 521 aaKnown RBP15.92■□□□□ 0.14
CLDND1-224ENST00000511667 FGD4Q96M96 766 aa15.92■□□□□ 0.14
CLDND1-224ENST00000511667 MMP19Q99542 508 aa15.92■□□□□ 0.14
CLDND1-224ENST00000511667 TMEM47Q9BQJ4 181 aa15.92■□□□□ 0.14
CLDND1-224ENST00000511667 DIAPH3Q9NSV4 1193 aa15.92■□□□□ 0.14
CLDND1-224ENST00000511667 STX8Q9UNK0 236 aa15.92■□□□□ 0.14
CLDND1-224ENST00000511667 ARIH1Q9Y4X5 557 aaPredicted RBP15.92■□□□□ 0.14
CLDND1-224ENST00000511667 SMCHD1A6NHR9 2005 aa15.92■□□□□ 0.14
CLDND1-224ENST00000511667 NEDD4P46934 1319 aa15.92■□□□□ 0.14
CLDND1-224ENST00000511667 RAD50Q92878 1312 aa15.92■□□□□ 0.14
CLDND1-224ENST00000511667 TMEM232C9JQI7 657 aa15.91■□□□□ 0.14
CLDND1-224ENST00000511667 SEPT4O43236 478 aa15.91■□□□□ 0.14
CLDND1-224ENST00000511667 ZBED4O75132 1171 aa15.91■□□□□ 0.14
CLDND1-224ENST00000511667 TOP1P11387 765 aaKnown RBP15.91■□□□□ 0.14
CLDND1-224ENST00000511667 MCCP23508 829 aa15.91■□□□□ 0.14
CLDND1-224ENST00000511667 SLC1A4P43007 532 aa15.91■□□□□ 0.14
CLDND1-224ENST00000511667 STAT2P52630 851 aa15.91■□□□□ 0.14
CLDND1-224ENST00000511667 HAND2P61296 217 aa15.91■□□□□ 0.14
CLDND1-224ENST00000511667 MFSD6Q6ZSS7 791 aa15.91■□□□□ 0.14
CLDND1-224ENST00000511667 RASGRP2Q7LDG7 609 aa15.91■□□□□ 0.14
CLDND1-224ENST00000511667 ZNF467Q7Z7K2 595 aaPredicted RBP15.91■□□□□ 0.14
CLDND1-224ENST00000511667 USP38Q8NB14 1042 aa15.91■□□□□ 0.14
CLDND1-224ENST00000511667 CHST13Q8NET6 341 aa15.91■□□□□ 0.14
CLDND1-224ENST00000511667 CHURC1Q8WUH1 139 aa15.91■□□□□ 0.14
CLDND1-224ENST00000511667 DCAF4Q8WV16 495 aa15.91■□□□□ 0.14
CLDND1-224ENST00000511667 ATXN2LQ8WWM7 1075 aaKnown RBP15.91■□□□□ 0.14
CLDND1-224ENST00000511667 TINF2Q9BSI4 451 aa15.91■□□□□ 0.14
CLDND1-224ENST00000511667 RNF41Q9H4P4 317 aaPredicted RBP15.91■□□□□ 0.14
CLDND1-224ENST00000511667 PGK2P07205 417 aa15.9■□□□□ 0.14
CLDND1-224ENST00000511667 CHMLP26374 656 aa15.9■□□□□ 0.14
CLDND1-224ENST00000511667 KCTD2Q14681 263 aa15.9■□□□□ 0.14
CLDND1-224ENST00000511667 KIFC2Q96AC6 838 aa15.9■□□□□ 0.14
CLDND1-224ENST00000511667 C1QTNF1Q9BXJ1 281 aa15.9■□□□□ 0.14
CLDND1-224ENST00000511667 RAVER2Q9HCJ3 691 aaKnown RBP15.9■□□□□ 0.14
CLDND1-224ENST00000511667 LTBP2Q14767 1821 aa15.89■□□□□ 0.13
CLDND1-224ENST00000511667 ZNF213O14771 459 aa15.89■□□□□ 0.13
CLDND1-224ENST00000511667 RAD21O60216 631 aa15.89■□□□□ 0.13
CLDND1-224ENST00000511667 ZNF865P0CJ78 1059 aaPredicted RBP15.89■□□□□ 0.13
CLDND1-224ENST00000511667 C9orf50Q5SZB4 431 aa15.89■□□□□ 0.13
CLDND1-224ENST00000511667 DGKHQ86XP1 1220 aa15.89■□□□□ 0.13
CLDND1-224ENST00000511667 PIAS4Q8N2W9 510 aaPredicted RBP15.89■□□□□ 0.13
CLDND1-224ENST00000511667 ADAMTS19Q8TE59 1207 aa15.89■□□□□ 0.13
CLDND1-224ENST00000511667 SENP6Q9GZR1 1112 aaPredicted RBP15.89■□□□□ 0.13
CLDND1-224ENST00000511667 RANBP17Q9H2T7 1088 aaKnown RBP15.89■□□□□ 0.13
CLDND1-224ENST00000511667 FBXO40Q9UH90 709 aa15.89■□□□□ 0.13
CLDND1-224ENST00000511667 PRR12Q9ULL5 1215 aa15.89■□□□□ 0.13
CLDND1-224ENST00000511667 SNAI1O95863 264 aaPredicted RBP15.88■□□□□ 0.13
CLDND1-224ENST00000511667 PDHBP11177 359 aa15.88■□□□□ 0.13
CLDND1-224ENST00000511667 TKFCQ3LXA3 575 aa15.88■□□□□ 0.13
CLDND1-224ENST00000511667 SAMD1Q6SPF0 538 aaPredicted RBP15.88■□□□□ 0.13
CLDND1-224ENST00000511667 KCTD1Q719H9 257 aa15.88■□□□□ 0.13
CLDND1-224ENST00000511667 FAM133AQ8N9E0 248 aa15.88■□□□□ 0.13
CLDND1-224ENST00000511667 ESR2Q92731 530 aa15.88■□□□□ 0.13
CLDND1-224ENST00000511667 UHRF1Q96T88 793 aaPredicted RBP15.88■□□□□ 0.13
CLDND1-224ENST00000511667 HCN4Q9Y3Q4 1203 aa15.88■□□□□ 0.13
CLDND1-224ENST00000511667 DNM1LO00429 736 aa15.87■□□□□ 0.13
CLDND1-224ENST00000511667 SGSM2O43147 1006 aa15.87■□□□□ 0.13
CLDND1-224ENST00000511667 ZNF543Q08ER8 600 aa15.87■□□□□ 0.13
CLDND1-224ENST00000511667 PRAMEF19Q5SWL8 479 aa15.87■□□□□ 0.13
CLDND1-224ENST00000511667 CPXCR1Q8N123 301 aa15.87■□□□□ 0.13
CLDND1-224ENST00000511667 AGBL1Q96MI9 1066 aa15.87■□□□□ 0.13
CLDND1-224ENST00000511667 ASB2Q96Q27 587 aa15.87■□□□□ 0.13
CLDND1-224ENST00000511667 KATNBL1Q9H079 304 aa15.87■□□□□ 0.13
CLDND1-224ENST00000511667 THEGQ9P2T0 379 aa15.87■□□□□ 0.13
CLDND1-224ENST00000511667 CTNNA3Q9UI47 895 aa15.87■□□□□ 0.13
CLDND1-224ENST00000511667 LCTP09848 1927 aa15.87■□□□□ 0.13
CLDND1-224ENST00000511667 TAL1P17542 331 aaPredicted RBP15.86■□□□□ 0.13
CLDND1-224ENST00000511667 ATN1P54259 1190 aaPredicted RBP15.86■□□□□ 0.13
CLDND1-224ENST00000511667 RRP12Q5JTH9 1297 aaKnown RBP15.86■□□□□ 0.13
CLDND1-224ENST00000511667 TTBK2Q6IQ55 1244 aa15.86■□□□□ 0.13
CLDND1-224ENST00000511667 IL27Q8NEV9 243 aa15.86■□□□□ 0.13
CLDND1-224ENST00000511667 A1CFQ9NQ94 594 aaKnown RBP15.86■□□□□ 0.13
CLDND1-224ENST00000511667 ZSWIM5Q9P217 1185 aa15.86■□□□□ 0.13
CLDND1-224ENST00000511667 ASTN1O14525 1302 aa15.86■□□□□ 0.13
CLDND1-224ENST00000511667 KDM4AO75164 1064 aa15.85■□□□□ 0.13
CLDND1-224ENST00000511667 ICAM1P05362 532 aa15.85■□□□□ 0.13
CLDND1-224ENST00000511667 RTP1P59025 263 aa15.85■□□□□ 0.13
CLDND1-224ENST00000511667 NKX3-2P78367 333 aa15.85■□□□□ 0.13
CLDND1-224ENST00000511667 PTH1RQ03431 593 aa15.85■□□□□ 0.13
CLDND1-224ENST00000511667 GRIN2CQ14957 1233 aa15.85■□□□□ 0.13
CLDND1-224ENST00000511667 SNX17Q15036 470 aa15.85■□□□□ 0.13
CLDND1-224ENST00000511667 IMMTQ16891 758 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms