RNA–Protein interactions for RNA: ENST00000511382.1

PDE4D-219, Transcript of phosphodiesterase 4D, humanhuman

TSL 4

Gene PDE4D, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-219ENST00000511382 CHAF1AQ13111 956 aaPredicted RBP6.15□□□□□ -1.42
PDE4D-219ENST00000511382 PABPC4Q13310 644 aaKnown RBP eCLIP6.15□□□□□ -1.42
PDE4D-219ENST00000511382 METTL24Q5JXM2 366 aa6.15□□□□□ -1.42
PDE4D-219ENST00000511382 USP17L2Q6R6M4 530 aa6.15□□□□□ -1.42
PDE4D-219ENST00000511382 ATG9AQ7Z3C6 839 aa6.15□□□□□ -1.42
PDE4D-219ENST00000511382 VPS37DQ86XT2 251 aa6.15□□□□□ -1.42
PDE4D-219ENST00000511382 ZNF280CQ8ND82 737 aa6.15□□□□□ -1.42
PDE4D-219ENST00000511382 ZNF384Q8TF68 577 aa6.15□□□□□ -1.42
PDE4D-219ENST00000511382 CDX2Q99626 313 aaPredicted RBP6.15□□□□□ -1.42
PDE4D-219ENST00000511382 ESYT1Q9BSJ8 1104 aa6.15□□□□□ -1.42
PDE4D-219ENST00000511382 WDR18Q9BV38 432 aa6.15□□□□□ -1.42
PDE4D-219ENST00000511382 TTYH1Q9H313 450 aaPredicted RBP6.15□□□□□ -1.42
PDE4D-219ENST00000511382 SEMA6BQ9H3T3 888 aa6.15□□□□□ -1.42
PDE4D-219ENST00000511382 BICC1Q9H694 974 aaKnown RBP6.15□□□□□ -1.42
PDE4D-219ENST00000511382 DDX4Q9NQI0 724 aaKnown RBP6.15□□□□□ -1.42
PDE4D-219ENST00000511382 PICK1Q9NRD5 415 aa6.15□□□□□ -1.42
PDE4D-219ENST00000511382 CHMP3Q9Y3E7 222 aa6.15□□□□□ -1.42
PDE4D-219ENST00000511382 ROBO3Q96MS0 1386 aa6.15□□□□□ -1.43
PDE4D-219ENST00000511382 GPR75-ASB3A0A0A6YYF3 556 aa6.14□□□□□ -1.43
PDE4D-219ENST00000511382 PALM3A6NDB9 673 aaPredicted RBP6.14□□□□□ -1.43
PDE4D-219ENST00000511382 EYA2O00167 538 aa6.14□□□□□ -1.43
PDE4D-219ENST00000511382 CIAO1O76071 339 aa6.14□□□□□ -1.43
PDE4D-219ENST00000511382 IFIT1P09914 478 aaKnown RBP6.14□□□□□ -1.43
PDE4D-219ENST00000511382 GPC1P35052 558 aa6.14□□□□□ -1.43
PDE4D-219ENST00000511382 CAP2P40123 477 aa6.14□□□□□ -1.43
PDE4D-219ENST00000511382 GDF10P55107 478 aa6.14□□□□□ -1.43
PDE4D-219ENST00000511382 CENPCQ03188 943 aa6.14□□□□□ -1.43
PDE4D-219ENST00000511382 PTSQ03393 145 aa6.14□□□□□ -1.43
PDE4D-219ENST00000511382 LBX2Q6XYB7 198 aa6.14□□□□□ -1.43
PDE4D-219ENST00000511382 GADL1Q6ZQY3 521 aa6.14□□□□□ -1.43
PDE4D-219ENST00000511382 TRIM50Q86XT4 487 aa6.14□□□□□ -1.43
PDE4D-219ENST00000511382 ZGPATQ8N5A5 531 aaKnown RBP6.14□□□□□ -1.43
PDE4D-219ENST00000511382 MAFAQ8NHW3 353 aaPredicted RBP6.14□□□□□ -1.43
PDE4D-219ENST00000511382 GTF3C2Q8WUA4 911 aaPredicted RBP6.14□□□□□ -1.43
PDE4D-219ENST00000511382 XAGE2Q96GT9 111 aa6.14□□□□□ -1.43
PDE4D-219ENST00000511382 PPP1R12CQ9BZL4 782 aa6.14□□□□□ -1.43
PDE4D-219ENST00000511382 ASCC2Q9H1I8 757 aaPredicted RBP6.14□□□□□ -1.43
PDE4D-219ENST00000511382 ETNK1Q9HBU6 452 aa6.14□□□□□ -1.43
PDE4D-219ENST00000511382 TXNRD2Q9NNW7 524 aa6.14□□□□□ -1.43
PDE4D-219ENST00000511382 GINM1Q9NU53 330 aa6.14□□□□□ -1.43
PDE4D-219ENST00000511382 USP40Q9NVE5 1235 aa6.14□□□□□ -1.43
PDE4D-219ENST00000511382 C9orf78Q9NZ63 289 aaPredicted RBP6.14□□□□□ -1.43
PDE4D-219ENST00000511382 SERTAD1Q9UHV2 236 aa6.14□□□□□ -1.43
PDE4D-219ENST00000511382 DENND2AQ9ULE3 1009 aa6.14□□□□□ -1.43
PDE4D-219ENST00000511382 MROH7-TTC4A0A0A0MT08 1334 aa6.14□□□□□ -1.43
PDE4D-219ENST00000511382 SYNGAP1Q96PV0 1343 aa6.14□□□□□ -1.43
PDE4D-219ENST00000511382 GREB1LQ9C091 1923 aaPredicted RBP6.13□□□□□ -1.43
PDE4D-219ENST00000511382 TTC28Q96AY4 2481 aa6.13□□□□□ -1.43
PDE4D-219ENST00000511382 TRIM75PA6NK02 468 aa6.13□□□□□ -1.43
PDE4D-219ENST00000511382 DNM1LO00429 736 aa6.13□□□□□ -1.43
PDE4D-219ENST00000511382 MSCO60682 206 aa6.13□□□□□ -1.43
PDE4D-219ENST00000511382 FRAT2O75474 233 aaPredicted RBP6.13□□□□□ -1.43
PDE4D-219ENST00000511382 WFS1O76024 890 aa6.13□□□□□ -1.43
PDE4D-219ENST00000511382 LDHBP07195 334 aaKnown RBP6.13□□□□□ -1.43
PDE4D-219ENST00000511382 SLURP2P0DP57 97 aa6.13□□□□□ -1.43
PDE4D-219ENST00000511382 SLC5A1P13866 664 aa6.13□□□□□ -1.43
PDE4D-219ENST00000511382 CCND3P30281 292 aaPredicted RBP6.13□□□□□ -1.43
PDE4D-219ENST00000511382 MAPK4P31152 587 aa6.13□□□□□ -1.43
PDE4D-219ENST00000511382 PLA2G5P39877 138 aa6.13□□□□□ -1.43
PDE4D-219ENST00000511382 EXOSC9Q06265 439 aaKnown RBP6.13□□□□□ -1.43
PDE4D-219ENST00000511382 POU4F2Q12837 409 aa6.13□□□□□ -1.43
PDE4D-219ENST00000511382 RRP1BQ14684 758 aaKnown RBP6.13□□□□□ -1.43
PDE4D-219ENST00000511382 TLR1Q15399 786 aa6.13□□□□□ -1.43
PDE4D-219ENST00000511382 TMEM214Q6NUQ4 689 aaKnown RBP6.13□□□□□ -1.43
PDE4D-219ENST00000511382 PLEKHM2Q8IWE5 1019 aa6.13□□□□□ -1.43
PDE4D-219ENST00000511382 KLHDC4Q8TBB5 520 aa6.13□□□□□ -1.43
PDE4D-219ENST00000511382 LPAR1Q92633 364 aa6.13□□□□□ -1.43
PDE4D-219ENST00000511382 C12orf42Q96LP6 360 aa6.13□□□□□ -1.43
PDE4D-219ENST00000511382 ZSCAN10Q96SZ4 725 aaPredicted RBP6.13□□□□□ -1.43
PDE4D-219ENST00000511382 APBA2Q99767 749 aa6.13□□□□□ -1.43
PDE4D-219ENST00000511382 USP44Q9H0E7 712 aa6.13□□□□□ -1.43
PDE4D-219ENST00000511382 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.13□□□□□ -1.43
PDE4D-219ENST00000511382 RBPJLQ9UBG7 517 aa6.13□□□□□ -1.43
PDE4D-219ENST00000511382 HERC5Q9UII4 1024 aaKnown RBP6.13□□□□□ -1.43
PDE4D-219ENST00000511382 LRRFIP2Q9Y608 721 aaKnown RBP6.13□□□□□ -1.43
PDE4D-219ENST00000511382 C19orf81C9J6K1 198 aa6.12□□□□□ -1.43
PDE4D-219ENST00000511382 IGSF3O75054 1194 aa6.12□□□□□ -1.43
PDE4D-219ENST00000511382 PPFIA3O75145 1194 aa6.12□□□□□ -1.43
PDE4D-219ENST00000511382 PTPRCP08575 1304 aa6.12□□□□□ -1.43
PDE4D-219ENST00000511382 RFX1P22670 979 aa6.12□□□□□ -1.43
PDE4D-219ENST00000511382 RGS2P41220 211 aa6.12□□□□□ -1.43
PDE4D-219ENST00000511382 ATP1A2P50993 1020 aa6.12□□□□□ -1.43
PDE4D-219ENST00000511382 HMGCS2P54868 508 aa6.12□□□□□ -1.43
PDE4D-219ENST00000511382 BACE1P56817 501 aa6.12□□□□□ -1.43
PDE4D-219ENST00000511382 HERVK_113P62684 666 aa6.12□□□□□ -1.43
PDE4D-219ENST00000511382 ERVK-24P63145 666 aa6.12□□□□□ -1.43
PDE4D-219ENST00000511382 SPP2Q13103 211 aa6.12□□□□□ -1.43
PDE4D-219ENST00000511382 GPR142Q7Z601 462 aa6.12□□□□□ -1.43
PDE4D-219ENST00000511382 ZNF521Q96K83 1311 aa6.12□□□□□ -1.43
PDE4D-219ENST00000511382 GRIP2Q9C0E4 1043 aa6.12□□□□□ -1.43
PDE4D-219ENST00000511382 DNAJC18Q9H819 358 aa6.12□□□□□ -1.43
PDE4D-219ENST00000511382 PCDHGA11Q9Y5H2 935 aa6.12□□□□□ -1.43
PDE4D-219ENST00000511382 MAFBQ9Y5Q3 323 aaPredicted RBP6.12□□□□□ -1.43
PDE4D-219ENST00000511382 NCOR1O75376 2440 aa6.11□□□□□ -1.43
PDE4D-219ENST00000511382 MCM3APO60318 1980 aa6.11□□□□□ -1.43
PDE4D-219ENST00000511382 TCF20Q9UGU0 1960 aaKnown RBP6.11□□□□□ -1.43
PDE4D-219ENST00000511382 MYH7P12883 1935 aa6.11□□□□□ -1.43
PDE4D-219ENST00000511382 PTPRSQ13332 1948 aa6.11□□□□□ -1.43
PDE4D-219ENST00000511382 LRRC37A2A6NM11 1700 aa6.11□□□□□ -1.43
PDE4D-219ENST00000511382 CNMDO75829 334 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms