RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 GOLGA8BA8MQT2 603 aa6.32□□□□□ -1.4
PROM1-211ENST00000511153 PDHXO00330 501 aa6.32□□□□□ -1.4
PROM1-211ENST00000511153 DHX16O60231 1041 aaKnown RBP6.32□□□□□ -1.4
PROM1-211ENST00000511153 TOP1P11387 765 aaKnown RBP6.32□□□□□ -1.4
PROM1-211ENST00000511153 VCAM1P19320 739 aa6.32□□□□□ -1.4
PROM1-211ENST00000511153 DNAJB2P25686 324 aa6.32□□□□□ -1.4
PROM1-211ENST00000511153 BACE1P56817 501 aa6.32□□□□□ -1.4
PROM1-211ENST00000511153 EXOSC10Q01780 885 aaKnown RBP6.32□□□□□ -1.4
PROM1-211ENST00000511153 PPATQ06203 517 aa6.32□□□□□ -1.4
PROM1-211ENST00000511153 MOGSQ13724 837 aa6.32□□□□□ -1.4
PROM1-211ENST00000511153 TOB2Q14106 344 aaPredicted RBP6.32□□□□□ -1.4
PROM1-211ENST00000511153 GPAT2Q6NUI2 795 aa6.32□□□□□ -1.4
PROM1-211ENST00000511153 CCDC174Q6PII3 467 aa6.32□□□□□ -1.4
PROM1-211ENST00000511153 ZNF654Q8IZM8 581 aa6.32□□□□□ -1.4
PROM1-211ENST00000511153 STAG2Q8N3U4 1231 aa6.32□□□□□ -1.4
PROM1-211ENST00000511153 KIFC2Q96AC6 838 aa6.32□□□□□ -1.4
PROM1-211ENST00000511153 PAGR1Q9BTK6 254 aa6.32□□□□□ -1.4
PROM1-211ENST00000511153 CPA4Q9UI42 421 aa6.32□□□□□ -1.4
PROM1-211ENST00000511153 SMCHD1A6NHR9 2005 aa6.32□□□□□ -1.4
PROM1-211ENST00000511153 A0A0G2JLL6 359 aaPredicted RBP6.31□□□□□ -1.4
PROM1-211ENST00000511153 TMEM232C9JQI7 657 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 TK2O00142 265 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 TRPA1O75762 1119 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 FLOT1O75955 427 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 PLEKHA8P1O95397 391 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 PSMA5P28066 241 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 SLC1A4P43007 532 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 GTF2A2P52657 109 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 PLS1Q14651 629 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 SART3Q15020 963 aaKnown RBP6.31□□□□□ -1.4
PROM1-211ENST00000511153 PRRT2Q7Z6L0 340 aaPredicted RBP6.31□□□□□ -1.4
PROM1-211ENST00000511153 CATIPQ7Z7H3 387 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 NBPF11Q86T75 865 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 HOMER1Q86YM7 354 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 CPXCR1Q8N123 301 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 ATG4CQ96DT6 458 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 P2RX7Q99572 595 aaKnown RBP6.31□□□□□ -1.4
PROM1-211ENST00000511153 BEGAINQ9BUH8 593 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 WDR18Q9BV38 432 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 VCPKMTQ9H867 229 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 GOPCQ9HD26 462 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 NYAP2Q9P242 653 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 TPCN1Q9ULQ1 816 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 TMX2Q9Y320 296 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 PLIN4Q96Q06 1357 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 ZSWIM8A7E2V4 1837 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 GOLGA8AA7E2F4 631 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 ZBTB43O43298 467 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 PDHBP11177 359 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 PCP11498 1178 aaKnown RBP6.31□□□□□ -1.4
PROM1-211ENST00000511153 CETPP11597 493 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 BMP3P12645 472 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 CDC27P30260 824 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 RBM25P49756 843 aaKnown RBP6.31□□□□□ -1.4
PROM1-211ENST00000511153 IRX3P78415 501 aaPredicted RBP6.31□□□□□ -1.4
PROM1-211ENST00000511153 TAF1CQ15572 869 aaPredicted RBP6.31□□□□□ -1.4
PROM1-211ENST00000511153 TSGA10IPQ3SY00 556 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 WDR78Q5VTH9 848 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 CCDC83Q8IWF9 413 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 ANKRD13CQ8N6S4 541 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 KIAA1683Q9H0B3 1180 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 ASCC2Q9H1I8 757 aaPredicted RBP6.31□□□□□ -1.4
PROM1-211ENST00000511153 HOMER2Q9NSB8 354 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 KCNH4Q9UQ05 1017 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 SLC12A7Q9Y666 1083 aa6.31□□□□□ -1.4
PROM1-211ENST00000511153 COL11A1P12107 1806 aaPredicted RBP6.31□□□□□ -1.4
PROM1-211ENST00000511153 MANSC4A6NHS7 340 aaPredicted RBP6.3□□□□□ -1.4
PROM1-211ENST00000511153 CXCL11O14625 94 aa6.3□□□□□ -1.4
PROM1-211ENST00000511153 HMGB1P09429 215 aaKnown RBP6.3□□□□□ -1.4
PROM1-211ENST00000511153 PARP1P09874 1014 aaKnown RBP6.3□□□□□ -1.4
PROM1-211ENST00000511153 ZBTB48P10074 688 aaPredicted RBP6.3□□□□□ -1.4
PROM1-211ENST00000511153 ADD1P35611 737 aaKnown RBP6.3□□□□□ -1.4
PROM1-211ENST00000511153 NOGQ13253 232 aa6.3□□□□□ -1.4
PROM1-211ENST00000511153 CRHR2Q13324 411 aa6.3□□□□□ -1.4
PROM1-211ENST00000511153 RTN1Q16799 776 aa6.3□□□□□ -1.4
PROM1-211ENST00000511153 SLC35G1Q2M3R5 365 aa6.3□□□□□ -1.4
PROM1-211ENST00000511153 USH1GQ495M9 461 aa6.3□□□□□ -1.4
PROM1-211ENST00000511153 APOA5Q6Q788 366 aa6.3□□□□□ -1.4
PROM1-211ENST00000511153 SYNE3Q6ZMZ3 975 aa6.3□□□□□ -1.4
PROM1-211ENST00000511153 DGKHQ86XP1 1220 aa6.3□□□□□ -1.4
PROM1-211ENST00000511153 TNS4Q8IZW8 715 aa6.3□□□□□ -1.4
PROM1-211ENST00000511153 DNAJC5GQ8N7S2 189 aa6.3□□□□□ -1.4
PROM1-211ENST00000511153 SMCR8Q8TEV9 937 aaPredicted RBP6.3□□□□□ -1.4
PROM1-211ENST00000511153 PHKBQ93100 1093 aa6.3□□□□□ -1.4
PROM1-211ENST00000511153 DDX11Q96FC9 970 aa6.3□□□□□ -1.4
PROM1-211ENST00000511153 TMEM87BQ96K49 555 aa6.3□□□□□ -1.4
PROM1-211ENST00000511153 ZFRQ96KR1 1074 aaKnown RBP6.3□□□□□ -1.4
PROM1-211ENST00000511153 TTC14Q96N46 770 aa6.3□□□□□ -1.4
PROM1-211ENST00000511153 SH2D4AQ9H788 454 aa6.3□□□□□ -1.4
PROM1-211ENST00000511153 RAVER2Q9HCJ3 691 aaKnown RBP6.3□□□□□ -1.4
PROM1-211ENST00000511153 TCP11L1Q9NUJ3 509 aa6.3□□□□□ -1.4
PROM1-211ENST00000511153 AGTPBP1Q9UPW5 1226 aa6.3□□□□□ -1.4
PROM1-211ENST00000511153 HPS5Q9UPZ3 1129 aa6.3□□□□□ -1.4
PROM1-211ENST00000511153 LOC285556D6RIA3 1793 aa6.3□□□□□ -1.4
PROM1-211ENST00000511153 MYH6P13533 1939 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 USP17L15C9J2P7 530 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 C19orf81C9J6K1 198 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 USP17L13C9JLJ4 530 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 USP17L11C9JVI0 530 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 KLRF2D3W0D1 207 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms