RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, human

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNF8-208	ENST00000510195	ADCYAP1R1	P41586	468 aa		31.5	■■■□□ 2.63
SNF8-208	ENST00000510195	ZNF589	Q86UQ0	364 aa	Predicted RBP	31.5	■■■□□ 2.63
SNF8-208	ENST00000510195	EXOC6	Q8TAG9	804 aa		31.5	■■■□□ 2.63
SNF8-208	ENST00000510195	ACAD9	Q9H845	621 aa		31.5	■■■□□ 2.63
SNF8-208	ENST00000510195	FAM184B	Q9ULE4	1060 aa		31.5	■■■□□ 2.63
SNF8-208	ENST00000510195	SDS	P20132	328 aa		31.49	■■■□□ 2.63
SNF8-208	ENST00000510195	DCAF4	Q8WV16	495 aa		31.49	■■■□□ 2.63
SNF8-208	ENST00000510195	LBHD1	Q9BQE6	289 aa	Predicted RBP	31.49	■■■□□ 2.63
SNF8-208	ENST00000510195	SOX1	O00570	391 aa	Predicted RBP	31.48	■■■□□ 2.63
SNF8-208	ENST00000510195	NT5C2	P49902	561 aa		31.48	■■■□□ 2.63
SNF8-208	ENST00000510195	KCTD1	Q719H9	257 aa		31.48	■■■□□ 2.63
SNF8-208	ENST00000510195	TSEN34	Q9BSV6	310 aa	Known RBP	31.48	■■■□□ 2.63
SNF8-208	ENST00000510195	ABHD16B	Q9H3Z7	469 aa		31.48	■■■□□ 2.63
SNF8-208	ENST00000510195	TOMM22	Q9NS69	142 aa		31.48	■■■□□ 2.63
SNF8-208	ENST00000510195	ATP11B	Q9Y2G3	1177 aa		31.48	■■■□□ 2.63
SNF8-208	ENST00000510195	ZNF536	O15090	1300 aa		31.48	■■■□□ 2.63
SNF8-208	ENST00000510195	HIP1	O00291	1037 aa		31.46	■■■□□ 2.63
SNF8-208	ENST00000510195	TOP1	P11387	765 aa	Known RBP	31.46	■■■□□ 2.63
SNF8-208	ENST00000510195	MDM2	Q00987	491 aa	Predicted RBP	31.46	■■■□□ 2.63
SNF8-208	ENST00000510195	TTC14	Q96N46	770 aa		31.46	■■■□□ 2.63
SNF8-208	ENST00000510195	PRR12	Q9ULL5	1215 aa		31.46	■■■□□ 2.63
SNF8-208	ENST00000510195	ADAMTS4	O75173	837 aa		31.45	■■■□□ 2.63
SNF8-208	ENST00000510195	PGK1	P00558	417 aa		31.45	■■■□□ 2.63
SNF8-208	ENST00000510195	ACVR2B	Q13705	512 aa		31.45	■■■□□ 2.63
SNF8-208	ENST00000510195	AKNAD1	Q5T1N1	836 aa		31.45	■■■□□ 2.63
SNF8-208	ENST00000510195	MFSD6	Q6ZSS7	791 aa		31.45	■■■□□ 2.63
SNF8-208	ENST00000510195	AGBL1	Q96MI9	1066 aa		31.45	■■■□□ 2.63
SNF8-208	ENST00000510195	RNF41	Q9H4P4	317 aa	Predicted RBP	31.45	■■■□□ 2.63
SNF8-208	ENST00000510195	HOMER2	Q9NSB8	354 aa		31.45	■■■□□ 2.63
SNF8-208	ENST00000510195	RNF146	Q9NTX7	359 aa		31.45	■■■□□ 2.63
SNF8-208	ENST00000510195	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	31.45	■■■□□ 2.63
SNF8-208	ENST00000510195	DUSP11	O75319	330 aa	Known RBP	31.44	■■■□□ 2.62
SNF8-208	ENST00000510195	RRP12	Q5JTH9	1297 aa	Known RBP	31.44	■■■□□ 2.62
SNF8-208	ENST00000510195	BTNL9	Q6UXG8	535 aa		31.44	■■■□□ 2.62
SNF8-208	ENST00000510195	FAM133A	Q8N9E0	248 aa		31.44	■■■□□ 2.62
SNF8-208	ENST00000510195	FERMT2	Q96AC1	680 aa		31.44	■■■□□ 2.62
SNF8-208	ENST00000510195	LRCH3	Q96II8	777 aa		31.44	■■■□□ 2.62
SNF8-208	ENST00000510195	FGD4	Q96M96	766 aa		31.44	■■■□□ 2.62
SNF8-208	ENST00000510195	TRERF1	Q96PN7	1200 aa		31.44	■■■□□ 2.62
SNF8-208	ENST00000510195	ZHX1	Q9UKY1	873 aa	Predicted RBP	31.44	■■■□□ 2.62
SNF8-208	ENST00000510195	POTEB2	H3BUK9	544 aa		31.43	■■■□□ 2.62
SNF8-208	ENST00000510195	TRIM60	Q495X7	471 aa		31.43	■■■□□ 2.62
SNF8-208	ENST00000510195	TMEM47	Q9BQJ4	181 aa		31.43	■■■□□ 2.62
SNF8-208	ENST00000510195	A1CF	Q9NQ94	594 aa	Known RBP	31.43	■■■□□ 2.62
SNF8-208	ENST00000510195	MOXD2P	A6NHM9	499 aa		31.42	■■■□□ 2.62
SNF8-208	ENST00000510195	ARMCX2	Q7L311	632 aa		31.42	■■■□□ 2.62
SNF8-208	ENST00000510195	ALAS1	P13196	640 aa		31.41	■■■□□ 2.62
SNF8-208	ENST00000510195	HAND2	P61296	217 aa		31.41	■■■□□ 2.62
SNF8-208	ENST00000510195	CCDC96	Q2M329	555 aa		31.41	■■■□□ 2.62
SNF8-208	ENST00000510195	KLHDC9	Q8NEP7	349 aa		31.41	■■■□□ 2.62
SNF8-208	ENST00000510195	NUP133	Q8WUM0	1156 aa		31.41	■■■□□ 2.62
SNF8-208	ENST00000510195	DIAPH3	Q9NSV4	1193 aa		31.41	■■■□□ 2.62
SNF8-208	ENST00000510195	SYNRG	Q9UMZ2	1314 aa		31.41	■■■□□ 2.62
SNF8-208	ENST00000510195		A0A1W2PQ45	241 aa	Predicted RBP	31.4	■■■□□ 2.62
SNF8-208	ENST00000510195		A0A1W2PQY0	241 aa		31.4	■■■□□ 2.62
SNF8-208	ENST00000510195	ASB14	A6NK59	587 aa		31.4	■■■□□ 2.62
SNF8-208	ENST00000510195	ZNF213	O14771	459 aa		31.4	■■■□□ 2.62
SNF8-208	ENST00000510195	ICAM1	P05362	532 aa		31.4	■■■□□ 2.62
SNF8-208	ENST00000510195	CST5	P28325	142 aa	Predicted RBP	31.4	■■■□□ 2.62
SNF8-208	ENST00000510195	CCDC174	Q6PII3	467 aa		31.4	■■■□□ 2.62
SNF8-208	ENST00000510195	CCDC144CP	Q8IYA2	1237 aa		31.4	■■■□□ 2.62
SNF8-208	ENST00000510195	CHMP4C	Q96CF2	233 aa		31.4	■■■□□ 2.62
SNF8-208	ENST00000510195	RANBP17	Q9H2T7	1088 aa	Known RBP	31.4	■■■□□ 2.62
SNF8-208	ENST00000510195	SPC25	Q9HBM1	224 aa		31.4	■■■□□ 2.62
SNF8-208	ENST00000510195	PNMA2	Q9UL42	364 aa		31.4	■■■□□ 2.62
SNF8-208	ENST00000510195	CNTN2	Q02246	1040 aa		31.39	■■■□□ 2.62
SNF8-208	ENST00000510195	CCDC144B	Q3MJ40	725 aa		31.39	■■■□□ 2.62
SNF8-208	ENST00000510195	CCSAP	Q6IQ19	270 aa	Predicted RBP	31.39	■■■□□ 2.62
SNF8-208	ENST00000510195	ESR2	Q92731	530 aa		31.39	■■■□□ 2.62
SNF8-208	ENST00000510195	PDLIM7	Q9NR12	457 aa		31.39	■■■□□ 2.62
SNF8-208	ENST00000510195	ACLY	P53396	1101 aa		31.38	■■■□□ 2.61
SNF8-208	ENST00000510195	CCDC178	Q5BJE1	867 aa		31.38	■■■□□ 2.61
SNF8-208	ENST00000510195	CWC27	Q6UX04	472 aa	Known RBP	31.38	■■■□□ 2.61
SNF8-208	ENST00000510195	PCSK9	Q8NBP7	692 aa	Known RBP	31.38	■■■□□ 2.61
SNF8-208	ENST00000510195	LENG1	Q96BZ8	264 aa	Predicted RBP	31.38	■■■□□ 2.61
SNF8-208	ENST00000510195	KATNBL1	Q9H079	304 aa		31.38	■■■□□ 2.61
SNF8-208	ENST00000510195	CCPG1	Q9ULG6	757 aa		31.38	■■■□□ 2.61
SNF8-208	ENST00000510195	MTMR7	Q9Y216	660 aa		31.38	■■■□□ 2.61
SNF8-208	ENST00000510195	LAMA2	P24043	3122 aa	Known RBP	31.38	■■■□□ 2.61
SNF8-208	ENST00000510195	MCM3AP	O60318	1980 aa		31.37	■■■□□ 2.61
SNF8-208	ENST00000510195	GJA9	P57773	515 aa		31.37	■■■□□ 2.61
SNF8-208	ENST00000510195	TLE2	Q04725	743 aa		31.37	■■■□□ 2.61
SNF8-208	ENST00000510195	SYDE2	Q5VT97	1194 aa		31.37	■■■□□ 2.61
SNF8-208	ENST00000510195	RASGRP2	Q7LDG7	609 aa		31.37	■■■□□ 2.61
SNF8-208	ENST00000510195	TBC1D10C	Q8IV04	446 aa		31.37	■■■□□ 2.61
SNF8-208	ENST00000510195	TOX2	Q96NM4	488 aa		31.37	■■■□□ 2.61
SNF8-208	ENST00000510195	UPF3A	Q9H1J1	476 aa	Known RBP	31.37	■■■□□ 2.61
SNF8-208	ENST00000510195	PRDM5	Q9NQX1	630 aa	Predicted RBP	31.37	■■■□□ 2.61
SNF8-208	ENST00000510195	CYP39A1	Q9NYL5	469 aa		31.37	■■■□□ 2.61
SNF8-208	ENST00000510195	PDHB	P11177	359 aa		31.36	■■■□□ 2.61
SNF8-208	ENST00000510195	NKX3-2	P78367	333 aa		31.36	■■■□□ 2.61
SNF8-208	ENST00000510195	KCNA10	Q16322	511 aa		31.36	■■■□□ 2.61
SNF8-208	ENST00000510195	DGKH	Q86XP1	1220 aa		31.36	■■■□□ 2.61
SNF8-208	ENST00000510195	DSCC1	Q9BVC3	393 aa		31.36	■■■□□ 2.61
SNF8-208	ENST00000510195	STARD7	Q9NQZ5	370 aa		31.36	■■■□□ 2.61
SNF8-208	ENST00000510195	SUPT16H	Q9Y5B9	1047 aa	Known RBP	31.36	■■■□□ 2.61
SNF8-208	ENST00000510195	LTBP2	Q14767	1821 aa		31.35	■■■□□ 2.61
SNF8-208	ENST00000510195	ELP1	O95163	1332 aa		31.35	■■■□□ 2.61
SNF8-208	ENST00000510195	SOWAHB	A6NEL2	793 aa		31.35	■■■□□ 2.61
SNF8-208	ENST00000510195	SNHG28	P0DPA3	235 aa		31.35	■■■□□ 2.61

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms