RNA–Protein interactions for RNA: ENST00000509990.5

MATR3-237, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MATR3, Length 3,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-237ENST00000509990 CCDC12Q8WUD4 166 aaPredicted RBP13.91□□□□□ -0.18
MATR3-237ENST00000509990 PCMTD1Q96MG8 357 aaPredicted RBP13.91□□□□□ -0.18
MATR3-237ENST00000509990 DUOX1Q9NRD9 1551 aa13.91□□□□□ -0.18
MATR3-237ENST00000509990 ENC1O14682 589 aa13.9□□□□□ -0.18
MATR3-237ENST00000509990 FNBP4Q8N3X1 1017 aaPredicted RBP13.9□□□□□ -0.18
MATR3-237ENST00000509990 PDGFDQ9GZP0 370 aaPredicted RBP13.9□□□□□ -0.18
MATR3-237ENST00000509990 BCAS3Q9H6U6 928 aa13.9□□□□□ -0.18
MATR3-237ENST00000509990 USP40Q9NVE5 1235 aa13.9□□□□□ -0.18
MATR3-237ENST00000509990 USP17L15C9J2P7 530 aa13.9□□□□□ -0.18
MATR3-237ENST00000509990 USP17L13C9JLJ4 530 aa13.9□□□□□ -0.18
MATR3-237ENST00000509990 USP17L11C9JVI0 530 aa13.9□□□□□ -0.18
MATR3-237ENST00000509990 USP17L18D6R9N7 530 aa13.9□□□□□ -0.18
MATR3-237ENST00000509990 USP17L22D6RA61 530 aa13.9□□□□□ -0.18
MATR3-237ENST00000509990 USP17L17D6RBQ6 530 aa13.9□□□□□ -0.18
MATR3-237ENST00000509990 USP17L19D6RCP7 530 aa13.9□□□□□ -0.18
MATR3-237ENST00000509990 USP17L20D6RJB6 530 aa13.9□□□□□ -0.18
MATR3-237ENST00000509990 SLC37A4O43826 429 aa13.9□□□□□ -0.18
MATR3-237ENST00000509990 GDF11O95390 407 aa13.9□□□□□ -0.18
MATR3-237ENST00000509990 GYPCP04921 128 aa13.9□□□□□ -0.18
MATR3-237ENST00000509990 CHRNA5P30532 468 aa13.9□□□□□ -0.18
MATR3-237ENST00000509990 ST5P78524 1137 aa13.9□□□□□ -0.18
MATR3-237ENST00000509990 USP17L24Q0WX57 530 aa13.9□□□□□ -0.18
MATR3-237ENST00000509990 STK4Q13043 487 aa13.9□□□□□ -0.18
MATR3-237ENST00000509990 USP17L6PQ6QN14 398 aa13.9□□□□□ -0.18
MATR3-237ENST00000509990 ZNF446Q9NWS9 450 aa13.9□□□□□ -0.18
MATR3-237ENST00000509990 RC3H1Q5TC82 1133 aaKnown RBP13.9□□□□□ -0.18
MATR3-237ENST00000509990 SPATA1Q5VX52 437 aa13.9□□□□□ -0.18
MATR3-237ENST00000509990 MNS1Q8NEH6 495 aa13.9□□□□□ -0.18
MATR3-237ENST00000509990 ZHX3Q9H4I2 956 aa13.9□□□□□ -0.18
MATR3-237ENST00000509990 MYH6P13533 1939 aa13.89□□□□□ -0.19
MATR3-237ENST00000509990 B4DLN1 442 aa13.89□□□□□ -0.19
MATR3-237ENST00000509990 NRDCO43847 1150 aa13.89□□□□□ -0.19
MATR3-237ENST00000509990 ASIC1P78348 528 aa13.89□□□□□ -0.19
MATR3-237ENST00000509990 APBA1Q02410 837 aa13.89□□□□□ -0.19
MATR3-237ENST00000509990 ADD3Q9UEY8 706 aaKnown RBP13.89□□□□□ -0.19
MATR3-237ENST00000509990 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.89□□□□□ -0.193e-9■■□□□ 13.2
MATR3-237ENST00000509990 AKR1B15C9JRZ8 316 aaPredicted RBP13.89□□□□□ -0.19
MATR3-237ENST00000509990 FKBP15Q5T1M5 1219 aa13.89□□□□□ -0.19
MATR3-237ENST00000509990 SH3RF1Q7Z6J0 888 aa13.89□□□□□ -0.19
MATR3-237ENST00000509990 CCDC84Q86UT8 332 aaPredicted RBP13.89□□□□□ -0.19
MATR3-237ENST00000509990 ZNF579Q8NAF0 562 aaKnown RBP13.89□□□□□ -0.19
MATR3-237ENST00000509990 FERMT2Q96AC1 680 aa13.89□□□□□ -0.19
MATR3-237ENST00000509990 CCDC34Q96HJ3 373 aa13.89□□□□□ -0.19
MATR3-237ENST00000509990 TRIM47Q96LD4 638 aa13.89□□□□□ -0.19
MATR3-237ENST00000509990 ZC3H12CQ9C0D7 883 aaKnown RBP13.89□□□□□ -0.19
MATR3-237ENST00000509990 PLEKHA4Q9H4M7 779 aa13.89□□□□□ -0.19
MATR3-237ENST00000509990 KCNJ18B7U540 433 aa13.88□□□□□ -0.19
MATR3-237ENST00000509990 USP17L10C9JJH3 530 aa13.88□□□□□ -0.19
MATR3-237ENST00000509990 GYS2P54840 703 aa13.88□□□□□ -0.19
MATR3-237ENST00000509990 KCNJ12Q14500 433 aa13.88□□□□□ -0.19
MATR3-237ENST00000509990 MCM6Q14566 821 aa13.88□□□□□ -0.19
MATR3-237ENST00000509990 GRM4Q14833 912 aa13.88□□□□□ -0.19
MATR3-237ENST00000509990 SBK1Q52WX2 424 aa13.88□□□□□ -0.19
MATR3-237ENST00000509990 ZNF569Q5MCW4 686 aa13.88□□□□□ -0.19
MATR3-237ENST00000509990 LEMD3Q9Y2U8 911 aa13.88□□□□□ -0.19
MATR3-237ENST00000509990 PAK1Q13153 545 aa13.88□□□□□ -0.19
MATR3-237ENST00000509990 NT5DC1Q5TFE4 455 aa13.88□□□□□ -0.19
MATR3-237ENST00000509990 KCNK18Q7Z418 384 aa13.88□□□□□ -0.19
MATR3-237ENST00000509990 ZCCHC17Q9NP64 241 aaKnown RBP13.88□□□□□ -0.19
MATR3-237ENST00000509990 DISC1Q9NRI5 854 aa13.88□□□□□ -0.19
MATR3-237ENST00000509990 ERICH4A6NGS2 130 aa13.88□□□□□ -0.19
MATR3-237ENST00000509990 SEMA3EO15041 775 aa13.88□□□□□ -0.19
MATR3-237ENST00000509990 POLR3GO15318 223 aaPredicted RBP13.88□□□□□ -0.19
MATR3-237ENST00000509990 DNA2P51530 1060 aa13.88□□□□□ -0.19
MATR3-237ENST00000509990 ERVK-24P63145 666 aa13.88□□□□□ -0.19
MATR3-237ENST00000509990 CYP27A1Q02318 531 aa13.88□□□□□ -0.19
MATR3-237ENST00000509990 ZYXQ15942 572 aaKnown RBP13.88□□□□□ -0.19
MATR3-237ENST00000509990 USH1GQ495M9 461 aa13.88□□□□□ -0.19
MATR3-237ENST00000509990 DGKHQ86XP1 1220 aa13.88□□□□□ -0.19
MATR3-237ENST00000509990 GDAP1L1Q96MZ0 367 aa13.88□□□□□ -0.19
MATR3-237ENST00000509990 PSMB7Q99436 277 aa13.88□□□□□ -0.19
MATR3-237ENST00000509990 AGPAT5Q9NUQ2 364 aa13.88□□□□□ -0.19
MATR3-237ENST00000509990 BARHL2Q9NY43 387 aa13.88□□□□□ -0.19
MATR3-237ENST00000509990 TNRC6CQ9HCJ0 1690 aaKnown RBP13.88□□□□□ -0.19
MATR3-237ENST00000509990 NPHP3-ACAD11A0A0J9YXS1 232 aa13.87□□□□□ -0.19
MATR3-237ENST00000509990 PALM3A6NDB9 673 aaPredicted RBP13.87□□□□□ -0.19
MATR3-237ENST00000509990 MARCH6O60337 910 aa13.87□□□□□ -0.19
MATR3-237ENST00000509990 MMP10P09238 476 aa13.87□□□□□ -0.19
MATR3-237ENST00000509990 KRT9P35527 623 aa13.87□□□□□ -0.19
MATR3-237ENST00000509990 PDE4DQ08499 809 aa13.87□□□□□ -0.19
MATR3-237ENST00000509990 IKQ13123 557 aaPredicted RBP13.87□□□□□ -0.19
MATR3-237ENST00000509990 TBX2Q13207 712 aaPredicted RBP13.87□□□□□ -0.19
MATR3-237ENST00000509990 CABP7Q86V35 215 aa13.87□□□□□ -0.19
MATR3-237ENST00000509990 DNAAF5Q86Y56 855 aa13.87□□□□□ -0.19
MATR3-237ENST00000509990 IRF2BP1Q8IU81 584 aa13.87□□□□□ -0.19
MATR3-237ENST00000509990 SPATA20Q8TB22 786 aa13.87□□□□□ -0.19
MATR3-237ENST00000509990 DRC1Q96MC2 740 aa13.87□□□□□ -0.19
MATR3-237ENST00000509990 SUGCTQ9HAC7 445 aa13.87□□□□□ -0.19
MATR3-237ENST00000509990 HDAC6Q9UBN7 1215 aa13.87□□□□□ -0.19
MATR3-237ENST00000509990 SEC63Q9UGP8 760 aaKnown RBP13.87□□□□□ -0.19
MATR3-237ENST00000509990 GUCA1BQ9UMX6 200 aa13.87□□□□□ -0.19
MATR3-237ENST00000509990 DUSP10Q9Y6W6 482 aa13.87□□□□□ -0.19
MATR3-237ENST00000509990 A0A1B0GTH6 734 aa13.87□□□□□ -0.19
MATR3-237ENST00000509990 PPP1R11O60927 126 aaPredicted RBP13.87□□□□□ -0.19
MATR3-237ENST00000509990 SRGAP2O75044 1071 aa13.87□□□□□ -0.19
MATR3-237ENST00000509990 BRD2P25440 801 aaKnown RBP13.87□□□□□ -0.19
MATR3-237ENST00000509990 CASQ1P31415 396 aa13.87□□□□□ -0.19
MATR3-237ENST00000509990 SOGA3Q5TF21 947 aa13.87□□□□□ -0.19
MATR3-237ENST00000509990 COL23A1Q86Y22 540 aaPredicted RBP13.87□□□□□ -0.19
MATR3-237ENST00000509990 RBM17Q96I25 401 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms