RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 FGAP02671 866 aa18.19■□□□□ 0.5
TPM3-219ENST00000509409 ALAS1P13196 640 aa18.19■□□□□ 0.5
TPM3-219ENST00000509409 SNAP25P60880 206 aa18.19■□□□□ 0.5
TPM3-219ENST00000509409 AAMPQ13685 434 aa18.19■□□□□ 0.5
TPM3-219ENST00000509409 CCDC96Q2M329 555 aa18.19■□□□□ 0.5
TPM3-219ENST00000509409 C1orf53Q5VUE5 145 aa18.19■□□□□ 0.5
TPM3-219ENST00000509409 SH3RF1Q7Z6J0 888 aa18.19■□□□□ 0.5
TPM3-219ENST00000509409 NUP133Q8WUM0 1156 aa18.19■□□□□ 0.5
TPM3-219ENST00000509409 VTI1AQ96AJ9 217 aa18.19■□□□□ 0.5
TPM3-219ENST00000509409 TRERF1Q96PN7 1200 aa18.19■□□□□ 0.5
TPM3-219ENST00000509409 TSEN34Q9BSV6 310 aaKnown RBP18.19■□□□□ 0.5
TPM3-219ENST00000509409 SPC25Q9HBM1 224 aa18.19■□□□□ 0.5
TPM3-219ENST00000509409 RNF146Q9NTX7 359 aa18.19■□□□□ 0.5
TPM3-219ENST00000509409 TACC3Q9Y6A5 838 aa18.19■□□□□ 0.5
TPM3-219ENST00000509409 GREB1LQ9C091 1923 aaPredicted RBP18.19■□□□□ 0.5
TPM3-219ENST00000509409 LAMA3Q16787 3333 aa18.18■□□□□ 0.5
TPM3-219ENST00000509409 A0A0D9SFI3 127 aa18.18■□□□□ 0.5
TPM3-219ENST00000509409 A0A1W2PQ45 241 aaPredicted RBP18.18■□□□□ 0.5
TPM3-219ENST00000509409 A0A1W2PQY0 241 aa18.18■□□□□ 0.5
TPM3-219ENST00000509409 TRIM43BA6NCK2 446 aa18.18■□□□□ 0.5
TPM3-219ENST00000509409 ORC4O43929 436 aa18.18■□□□□ 0.5
TPM3-219ENST00000509409 PLA2G6O60733 806 aa18.18■□□□□ 0.5
TPM3-219ENST00000509409 PQBP1O60828 265 aaKnown RBP18.18■□□□□ 0.5
TPM3-219ENST00000509409 DUSP11O75319 330 aaKnown RBP18.18■□□□□ 0.5
TPM3-219ENST00000509409 CNTN2Q02246 1040 aa18.18■□□□□ 0.5
TPM3-219ENST00000509409 NMIQ13287 307 aaPredicted RBP18.18■□□□□ 0.5
TPM3-219ENST00000509409 KCNA10Q16322 511 aa18.18■□□□□ 0.5
TPM3-219ENST00000509409 TKFCQ3LXA3 575 aa18.18■□□□□ 0.5
TPM3-219ENST00000509409 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.18■□□□□ 0.5
TPM3-219ENST00000509409 ARMCX2Q7L311 632 aa18.18■□□□□ 0.5
TPM3-219ENST00000509409 SLC17A8Q8NDX2 589 aa18.18■□□□□ 0.5
TPM3-219ENST00000509409 TRIM43Q96BQ3 446 aaPredicted RBP18.18■□□□□ 0.5
TPM3-219ENST00000509409 ABHD16BQ9H3Z7 469 aa18.18■□□□□ 0.5
TPM3-219ENST00000509409 STARD7Q9NQZ5 370 aa18.18■□□□□ 0.5
TPM3-219ENST00000509409 PDLIM7Q9NR12 457 aa18.18■□□□□ 0.5
TPM3-219ENST00000509409 PARP14Q460N5 1801 aa18.17■□□□□ 0.5
TPM3-219ENST00000509409 FRMPD3Q5JV73 1810 aa18.17■□□□□ 0.5
TPM3-219ENST00000509409 ADAMTS4O75173 837 aa18.17■□□□□ 0.5
TPM3-219ENST00000509409 CLTBP09497 229 aa18.17■□□□□ 0.5
TPM3-219ENST00000509409 C6orf222P0C671 652 aaPredicted RBP18.17■□□□□ 0.5
TPM3-219ENST00000509409 HSPD1P10809 573 aaKnown RBP18.17■□□□□ 0.5
TPM3-219ENST00000509409 ACLYP53396 1101 aa18.17■□□□□ 0.5
TPM3-219ENST00000509409 CCDC144BQ3MJ40 725 aa18.17■□□□□ 0.5
TPM3-219ENST00000509409 NOL8Q76FK4 1167 aaKnown RBP18.17■□□□□ 0.5
TPM3-219ENST00000509409 TICAM2Q86XR7 235 aa18.17■□□□□ 0.5
TPM3-219ENST00000509409 PRR12Q9ULL5 1215 aa18.17■□□□□ 0.5
TPM3-219ENST00000509409 SYNRGQ9UMZ2 1314 aa18.17■□□□□ 0.5
TPM3-219ENST00000509409 MOXD2PA6NHM9 499 aa18.16■□□□□ 0.5
TPM3-219ENST00000509409 HAND2P61296 217 aa18.16■□□□□ 0.5
TPM3-219ENST00000509409 SHHQ15465 462 aa18.16■□□□□ 0.5
TPM3-219ENST00000509409 CCDC144CPQ8IYA2 1237 aa18.16■□□□□ 0.5
TPM3-219ENST00000509409 KLHDC9Q8NEP7 349 aa18.16■□□□□ 0.5
TPM3-219ENST00000509409 DCAF4Q8WV16 495 aa18.16■□□□□ 0.5
TPM3-219ENST00000509409 A1CFQ9NQ94 594 aaKnown RBP18.16■□□□□ 0.5
TPM3-219ENST00000509409 TMEM39AQ9NV64 488 aa18.16■□□□□ 0.5
TPM3-219ENST00000509409 SMCHD1A6NHR9 2005 aa18.16■□□□□ 0.5
TPM3-219ENST00000509409 ZNF536O15090 1300 aa18.16■□□□□ 0.5
TPM3-219ENST00000509409 ASB14A6NK59 587 aa18.15■□□□□ 0.5
TPM3-219ENST00000509409 DCDC2CA8MYV0 355 aa18.15■□□□□ 0.5
TPM3-219ENST00000509409 FGRP09769 529 aa18.15■□□□□ 0.5
TPM3-219ENST00000509409 TOP1P11387 765 aaKnown RBP18.15■□□□□ 0.5
TPM3-219ENST00000509409 RAG1P15918 1043 aa18.15■□□□□ 0.5
TPM3-219ENST00000509409 MFAP1P55081 439 aaKnown RBP18.15■□□□□ 0.5
TPM3-219ENST00000509409 RASGRP2Q7LDG7 609 aa18.15■□□□□ 0.5
TPM3-219ENST00000509409 ZNF589Q86UQ0 364 aaPredicted RBP18.15■□□□□ 0.5
TPM3-219ENST00000509409 CHD1LQ86WJ1 897 aa18.15■□□□□ 0.5
TPM3-219ENST00000509409 PCSK9Q8NBP7 692 aaKnown RBP18.15■□□□□ 0.5
TPM3-219ENST00000509409 FGD4Q96M96 766 aa18.15■□□□□ 0.5
TPM3-219ENST00000509409 MTMR10Q9NXD2 777 aa18.15■□□□□ 0.5
TPM3-219ENST00000509409 CCPG1Q9ULG6 757 aa18.15■□□□□ 0.5
TPM3-219ENST00000509409 MYH4Q9Y623 1939 aa18.15■□□□□ 0.5
TPM3-219ENST00000509409 MYADML2A6NDP7 307 aa18.14■□□□□ 0.49
TPM3-219ENST00000509409 SOWAHBA6NEL2 793 aa18.14■□□□□ 0.49
TPM3-219ENST00000509409 IGHDP01880 384 aa18.14■□□□□ 0.49
TPM3-219ENST00000509409 SDSP20132 328 aa18.14■□□□□ 0.49
TPM3-219ENST00000509409 SLC16A2P36021 539 aa18.14■□□□□ 0.49
TPM3-219ENST00000509409 GNASQ5JWF2 1037 aa18.14■□□□□ 0.49
TPM3-219ENST00000509409 TTBK2Q6IQ55 1244 aa18.14■□□□□ 0.49
TPM3-219ENST00000509409 NSMFQ6X4W1 530 aa18.14■□□□□ 0.49
TPM3-219ENST00000509409 MFSD6Q6ZSS7 791 aa18.14■□□□□ 0.49
TPM3-219ENST00000509409 SMC5Q8IY18 1101 aa18.14■□□□□ 0.49
TPM3-219ENST00000509409 FAM133AQ8N9E0 248 aa18.14■□□□□ 0.49
TPM3-219ENST00000509409 GLT1D1Q96MS3 346 aa18.14■□□□□ 0.49
TPM3-219ENST00000509409 TMEM47Q9BQJ4 181 aa18.14■□□□□ 0.49
TPM3-219ENST00000509409 GPCPD1Q9NPB8 672 aa18.14■□□□□ 0.49
TPM3-219ENST00000509409 TCP11L1Q9NUJ3 509 aa18.14■□□□□ 0.49
TPM3-219ENST00000509409 CCDC171Q6TFL3 1326 aa18.14■□□□□ 0.49
TPM3-219ENST00000509409 ASGR1P07306 291 aa18.13■□□□□ 0.49
TPM3-219ENST00000509409 NOVP48745 357 aa18.13■□□□□ 0.49
TPM3-219ENST00000509409 GJA9P57773 515 aa18.13■□□□□ 0.49
TPM3-219ENST00000509409 IRX5P78411 483 aaPredicted RBP18.13■□□□□ 0.49
TPM3-219ENST00000509409 TNFAIP2Q03169 654 aa18.13■□□□□ 0.49
TPM3-219ENST00000509409 MUM1L1Q5H9M0 696 aa18.13■□□□□ 0.49
TPM3-219ENST00000509409 C9orf50Q5SZB4 431 aa18.13■□□□□ 0.49
TPM3-219ENST00000509409 SYDE2Q5VT97 1194 aa18.13■□□□□ 0.49
TPM3-219ENST00000509409 EXOC6Q8TAG9 804 aa18.13■□□□□ 0.49
TPM3-219ENST00000509409 FRMPD2Q68DX3 1309 aaPredicted RBP18.13■□□□□ 0.49
TPM3-219ENST00000509409 KIAA0355O15063 1070 aa18.12■□□□□ 0.49
TPM3-219ENST00000509409 ITGB8P26012 769 aa18.12■□□□□ 0.49
TPM3-219ENST00000509409 NUCB1Q02818 461 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms