RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 IL17RBQ9NRM6 502 aa18.27■□□□□ 0.52
SMAD5-205ENST00000509297 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.27■□□□□ 0.52
SMAD5-205ENST00000509297 TRIM43BA6NCK2 446 aa18.26■□□□□ 0.51
SMAD5-205ENST00000509297 TSPY2A6NKD2 308 aa18.26■□□□□ 0.51
SMAD5-205ENST00000509297 KIAA0355O15063 1070 aa18.26■□□□□ 0.51
SMAD5-205ENST00000509297 CLTBP09497 229 aa18.26■□□□□ 0.51
SMAD5-205ENST00000509297 ACLYP53396 1101 aa18.26■□□□□ 0.51
SMAD5-205ENST00000509297 RCSD1Q6JBY9 416 aa18.26■□□□□ 0.51
SMAD5-205ENST00000509297 CCDC129Q6ZRS4 1044 aa18.26■□□□□ 0.51
SMAD5-205ENST00000509297 FAM133AQ8N9E0 248 aa18.26■□□□□ 0.51
SMAD5-205ENST00000509297 SLC17A8Q8NDX2 589 aa18.26■□□□□ 0.51
SMAD5-205ENST00000509297 NUP133Q8WUM0 1156 aa18.26■□□□□ 0.51
SMAD5-205ENST00000509297 BADQ92934 168 aa18.26■□□□□ 0.51
SMAD5-205ENST00000509297 TRIM43Q96BQ3 446 aaPredicted RBP18.26■□□□□ 0.51
SMAD5-205ENST00000509297 CRBNQ96SW2 442 aa18.26■□□□□ 0.51
SMAD5-205ENST00000509297 ACAD9Q9H845 621 aa18.26■□□□□ 0.51
SMAD5-205ENST00000509297 ZHX1Q9UKY1 873 aaPredicted RBP18.26■□□□□ 0.51
SMAD5-205ENST00000509297 STX8Q9UNK0 236 aa18.26■□□□□ 0.51
SMAD5-205ENST00000509297 ZNF536O15090 1300 aa18.25■□□□□ 0.51
SMAD5-205ENST00000509297 ZMYM6O95789 1325 aa18.25■□□□□ 0.51
SMAD5-205ENST00000509297 MCCP23508 829 aa18.25■□□□□ 0.51
SMAD5-205ENST00000509297 NKX3-2P78367 333 aa18.25■□□□□ 0.51
SMAD5-205ENST00000509297 SH3RF1Q7Z6J0 888 aa18.25■□□□□ 0.51
SMAD5-205ENST00000509297 LENG1Q96BZ8 264 aaPredicted RBP18.25■□□□□ 0.51
SMAD5-205ENST00000509297 UPF3AQ9H1J1 476 aaKnown RBP18.25■□□□□ 0.51
SMAD5-205ENST00000509297 ELP1O95163 1332 aa18.24■□□□□ 0.51
SMAD5-205ENST00000509297 SLC4A3P48751 1232 aa18.24■□□□□ 0.51
SMAD5-205ENST00000509297 CTDSPL2Q05D32 466 aa18.24■□□□□ 0.51
SMAD5-205ENST00000509297 SHHQ15465 462 aa18.24■□□□□ 0.51
SMAD5-205ENST00000509297 VPS53Q5VIR6 699 aa18.24■□□□□ 0.51
SMAD5-205ENST00000509297 ARMCX2Q7L311 632 aa18.24■□□□□ 0.51
SMAD5-205ENST00000509297 PCSK9Q8NBP7 692 aaKnown RBP18.24■□□□□ 0.51
SMAD5-205ENST00000509297 KATNBL1Q9H079 304 aa18.24■□□□□ 0.51
SMAD5-205ENST00000509297 SPC25Q9HBM1 224 aa18.24■□□□□ 0.51
SMAD5-205ENST00000509297 STARD7Q9NQZ5 370 aa18.24■□□□□ 0.51
SMAD5-205ENST00000509297 GJA9P57773 515 aa18.23■□□□□ 0.51
SMAD5-205ENST00000509297 KCNA10Q16322 511 aa18.23■□□□□ 0.51
SMAD5-205ENST00000509297 CCDC144BQ3MJ40 725 aa18.23■□□□□ 0.51
SMAD5-205ENST00000509297 MCMDC2Q4G0Z9 681 aa18.23■□□□□ 0.51
SMAD5-205ENST00000509297 CCDC144CPQ8IYA2 1237 aa18.23■□□□□ 0.51
SMAD5-205ENST00000509297 DCAF4Q8WV16 495 aa18.23■□□□□ 0.51
SMAD5-205ENST00000509297 AGBL1Q96MI9 1066 aa18.23■□□□□ 0.51
SMAD5-205ENST00000509297 A1CFQ9NQ94 594 aaKnown RBP18.23■□□□□ 0.51
SMAD5-205ENST00000509297 RNF146Q9NTX7 359 aa18.23■□□□□ 0.51
SMAD5-205ENST00000509297 ASB14A6NK59 587 aa18.22■□□□□ 0.51
SMAD5-205ENST00000509297 DCDC2CA8MYV0 355 aa18.22■□□□□ 0.51
SMAD5-205ENST00000509297 RANBP6O60518 1105 aaKnown RBP18.22■□□□□ 0.51
SMAD5-205ENST00000509297 NMT2O60551 498 aa18.22■□□□□ 0.51
SMAD5-205ENST00000509297 PQBP1O60828 265 aaKnown RBP18.22■□□□□ 0.51
SMAD5-205ENST00000509297 FGAP02671 866 aa18.22■□□□□ 0.51
SMAD5-205ENST00000509297 PCP11498 1178 aaKnown RBP18.22■□□□□ 0.51
SMAD5-205ENST00000509297 IKQ13123 557 aaPredicted RBP18.22■□□□□ 0.51
SMAD5-205ENST00000509297 C9orf50Q5SZB4 431 aa18.22■□□□□ 0.51
SMAD5-205ENST00000509297 GLT1D1Q96MS3 346 aa18.22■□□□□ 0.51
SMAD5-205ENST00000509297 INCENPQ9NQS7 918 aa18.22■□□□□ 0.51
SMAD5-205ENST00000509297 HOMER2Q9NSB8 354 aa18.22■□□□□ 0.51
SMAD5-205ENST00000509297 TCP11L1Q9NUJ3 509 aa18.22■□□□□ 0.51
SMAD5-205ENST00000509297 PRR12Q9ULL5 1215 aa18.22■□□□□ 0.51
SMAD5-205ENST00000509297 MROH7Q68CQ1 1323 aa18.22■□□□□ 0.51
SMAD5-205ENST00000509297 ADCY6O43306 1168 aa18.21■□□□□ 0.51
SMAD5-205ENST00000509297 RAG1P15918 1043 aa18.21■□□□□ 0.51
SMAD5-205ENST00000509297 ITGB8P26012 769 aa18.21■□□□□ 0.51
SMAD5-205ENST00000509297 CDK7P50613 346 aa18.21■□□□□ 0.51
SMAD5-205ENST00000509297 SMAD3P84022 425 aaKnown RBP18.21■□□□□ 0.51
SMAD5-205ENST00000509297 CNTN2Q02246 1040 aa18.21■□□□□ 0.51
SMAD5-205ENST00000509297 FAAP100Q0VG06 881 aa18.21■□□□□ 0.51
SMAD5-205ENST00000509297 BTNL9Q6UXG8 535 aa18.21■□□□□ 0.51
SMAD5-205ENST00000509297 KCTD1Q719H9 257 aa18.21■□□□□ 0.51
SMAD5-205ENST00000509297 SMC5Q8IY18 1101 aa18.21■□□□□ 0.51
SMAD5-205ENST00000509297 FAM227BQ96M60 508 aa18.21■□□□□ 0.51
SMAD5-205ENST00000509297 TRERF1Q96PN7 1200 aa18.21■□□□□ 0.51
SMAD5-205ENST00000509297 TMEM39AQ9NV64 488 aa18.21■□□□□ 0.51
SMAD5-205ENST00000509297 ISY1Q9ULR0 285 aaKnown RBP18.21■□□□□ 0.51
SMAD5-205ENST00000509297 A0A0D9SFI3 127 aa18.2■□□□□ 0.5
SMAD5-205ENST00000509297 MYADML2A6NDP7 307 aa18.2■□□□□ 0.5
SMAD5-205ENST00000509297 SOWAHBA6NEL2 793 aa18.2■□□□□ 0.5
SMAD5-205ENST00000509297 ICAM1P05362 532 aa18.2■□□□□ 0.5
SMAD5-205ENST00000509297 C6orf222P0C671 652 aaPredicted RBP18.2■□□□□ 0.5
SMAD5-205ENST00000509297 HSPD1P10809 573 aaKnown RBP18.2■□□□□ 0.5
SMAD5-205ENST00000509297 TOP1P11387 765 aaKnown RBP18.2■□□□□ 0.5
SMAD5-205ENST00000509297 NT5C2P49902 561 aa18.2■□□□□ 0.5
SMAD5-205ENST00000509297 TBX21Q9UL17 535 aa18.2■□□□□ 0.5
SMAD5-205ENST00000509297 LOC102724159A0A0B4J2E5 919 aa18.19■□□□□ 0.5
SMAD5-205ENST00000509297 CTAGE5O15320 804 aa18.19■□□□□ 0.5
SMAD5-205ENST00000509297 ASGR1P07306 291 aa18.19■□□□□ 0.5
SMAD5-205ENST00000509297 ALAS1P13196 640 aa18.19■□□□□ 0.5
SMAD5-205ENST00000509297 PWP2Q15269 919 aaKnown RBP18.19■□□□□ 0.5
SMAD5-205ENST00000509297 GNASQ5JWF2 1037 aa18.19■□□□□ 0.5
SMAD5-205ENST00000509297 ZNF697Q5TEC3 545 aa18.19■□□□□ 0.5
SMAD5-205ENST00000509297 TTC14Q96N46 770 aa18.19■□□□□ 0.5
SMAD5-205ENST00000509297 GUCD1Q96NT3 240 aa18.19■□□□□ 0.5
SMAD5-205ENST00000509297 RANBP17Q9H2T7 1088 aaKnown RBP18.19■□□□□ 0.5
SMAD5-205ENST00000509297 CYP39A1Q9NYL5 469 aa18.19■□□□□ 0.5
SMAD5-205ENST00000509297 PNMA2Q9UL42 364 aa18.19■□□□□ 0.5
SMAD5-205ENST00000509297 CUL9Q8IWT3 2517 aa18.18■□□□□ 0.5
SMAD5-205ENST00000509297 TIMP1P01033 207 aa18.18■□□□□ 0.5
SMAD5-205ENST00000509297 TNFAIP2Q03169 654 aa18.18■□□□□ 0.5
SMAD5-205ENST00000509297 FPGSQ05932 587 aa18.18■□□□□ 0.5
SMAD5-205ENST00000509297 MORC4Q8TE76 937 aa18.18■□□□□ 0.5
SMAD5-205ENST00000509297 TMEM47Q9BQJ4 181 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms