RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 RWDD1Q9H446 243 aaPredicted RBP12.94□□□□□ -0.34
RNF4-212ENST00000509258 SLC38A10Q9HBR0 1119 aa12.94□□□□□ -0.34
RNF4-212ENST00000509258 ZNF536O15090 1300 aa12.93□□□□□ -0.34
RNF4-212ENST00000509258 CCDC171Q6TFL3 1326 aa12.93□□□□□ -0.34
RNF4-212ENST00000509258 SYNGAP1Q96PV0 1343 aa12.93□□□□□ -0.34
RNF4-212ENST00000509258 CDH23Q9H251 3354 aa12.93□□□□□ -0.34
RNF4-212ENST00000509258 DNAJC25-GNG10A0A024R161 153 aa12.93□□□□□ -0.34
RNF4-212ENST00000509258 A0A1W2PQ45 241 aaPredicted RBP12.93□□□□□ -0.34
RNF4-212ENST00000509258 A0A1W2PQY0 241 aa12.93□□□□□ -0.34
RNF4-212ENST00000509258 TRIM43BA6NCK2 446 aa12.93□□□□□ -0.34
RNF4-212ENST00000509258 TRIM6-TRIM34B2RNG4 842 aa12.93□□□□□ -0.34
RNF4-212ENST00000509258 PGK1P00558 417 aa12.93□□□□□ -0.34
RNF4-212ENST00000509258 ZNF865P0CJ78 1059 aaPredicted RBP12.93□□□□□ -0.34
RNF4-212ENST00000509258 SDSP20132 328 aa12.93□□□□□ -0.34
RNF4-212ENST00000509258 MCCP23508 829 aa12.93□□□□□ -0.34
RNF4-212ENST00000509258 SLC4A3P48751 1232 aa12.93□□□□□ -0.34
RNF4-212ENST00000509258 SMAD3P84022 425 aaKnown RBP12.93□□□□□ -0.34
RNF4-212ENST00000509258 KCTD1Q719H9 257 aa12.93□□□□□ -0.34
RNF4-212ENST00000509258 SH3RF1Q7Z6J0 888 aa12.93□□□□□ -0.34
RNF4-212ENST00000509258 TRIM43Q96BQ3 446 aaPredicted RBP12.93□□□□□ -0.34
RNF4-212ENST00000509258 OSBPL3Q9H4L5 887 aa12.93□□□□□ -0.34
RNF4-212ENST00000509258 ZBTB47Q9UFB7 747 aaPredicted RBP12.93□□□□□ -0.34
RNF4-212ENST00000509258 DDX49Q9Y6V7 483 aaKnown RBP12.93□□□□□ -0.34
RNF4-212ENST00000509258 ADCY6O43306 1168 aa12.92□□□□□ -0.34
RNF4-212ENST00000509258 ORC4O43929 436 aa12.92□□□□□ -0.34
RNF4-212ENST00000509258 RANBP6O60518 1105 aaKnown RBP12.92□□□□□ -0.34
RNF4-212ENST00000509258 PQBP1O60828 265 aaKnown RBP12.92□□□□□ -0.34
RNF4-212ENST00000509258 ADAMTS4O75173 837 aa12.92□□□□□ -0.34
RNF4-212ENST00000509258 SLC3A2P08195 630 aaKnown RBP12.92□□□□□ -0.34
RNF4-212ENST00000509258 BMP3P12645 472 aa12.92□□□□□ -0.34
RNF4-212ENST00000509258 IRX5P78411 483 aaPredicted RBP12.92□□□□□ -0.34
RNF4-212ENST00000509258 AAMPQ13685 434 aa12.92□□□□□ -0.34
RNF4-212ENST00000509258 PPP4R3BQ5MIZ7 849 aa12.92□□□□□ -0.34
RNF4-212ENST00000509258 PRPF38AQ8NAV1 312 aaKnown RBP12.92□□□□□ -0.34
RNF4-212ENST00000509258 DDX11Q96FC9 970 aa12.92□□□□□ -0.34
RNF4-212ENST00000509258 TSEN34Q9BSV6 310 aaKnown RBP12.92□□□□□ -0.34
RNF4-212ENST00000509258 SYNPO2Q9UMS6 1093 aa12.92□□□□□ -0.34
RNF4-212ENST00000509258 MTMR7Q9Y216 660 aa12.92□□□□□ -0.34
RNF4-212ENST00000509258 NEDD4P46934 1319 aa12.91□□□□□ -0.34
RNF4-212ENST00000509258 SYNRGQ9UMZ2 1314 aa12.91□□□□□ -0.34
RNF4-212ENST00000509258 TMEM265A0A087WTH1 108 aa12.91□□□□□ -0.34
RNF4-212ENST00000509258 MOXD2PA6NHM9 499 aa12.91□□□□□ -0.34
RNF4-212ENST00000509258 TSPY2A6NKD2 308 aa12.91□□□□□ -0.34
RNF4-212ENST00000509258 TMEM232C9JQI7 657 aa12.91□□□□□ -0.34
RNF4-212ENST00000509258 ATP2A1O14983 1001 aa12.91□□□□□ -0.34
RNF4-212ENST00000509258 KIAA0355O15063 1070 aa12.91□□□□□ -0.34
RNF4-212ENST00000509258 ZBED4O75132 1171 aa12.91□□□□□ -0.34
RNF4-212ENST00000509258 SNAI1O95863 264 aaPredicted RBP12.91□□□□□ -0.34
RNF4-212ENST00000509258 GSPT1P15170 499 aaKnown RBP12.91□□□□□ -0.34
RNF4-212ENST00000509258 RAG1P15918 1043 aa12.91□□□□□ -0.34
RNF4-212ENST00000509258 RRP12Q5JTH9 1297 aaKnown RBP12.91□□□□□ -0.34
RNF4-212ENST00000509258 TTBK2Q6IQ55 1244 aa12.91□□□□□ -0.34
RNF4-212ENST00000509258 RCSD1Q6JBY9 416 aa12.91□□□□□ -0.34
RNF4-212ENST00000509258 MAMDC4Q6UXC1 1216 aa12.91□□□□□ -0.34
RNF4-212ENST00000509258 ZNF467Q7Z7K2 595 aaPredicted RBP12.91□□□□□ -0.34
RNF4-212ENST00000509258 NUP133Q8WUM0 1156 aa12.91□□□□□ -0.34
RNF4-212ENST00000509258 GMCL1Q96IK5 515 aa12.91□□□□□ -0.34
RNF4-212ENST00000509258 RNPC3Q96LT9 517 aaKnown RBP12.91□□□□□ -0.34
RNF4-212ENST00000509258 AGBL1Q96MI9 1066 aa12.91□□□□□ -0.34
RNF4-212ENST00000509258 CDX2Q99626 313 aaPredicted RBP12.91□□□□□ -0.34
RNF4-212ENST00000509258 STARD7Q9NQZ5 370 aa12.91□□□□□ -0.34
RNF4-212ENST00000509258 FEM1BQ9UK73 627 aa12.91□□□□□ -0.34
RNF4-212ENST00000509258 ZHX1Q9UKY1 873 aaPredicted RBP12.91□□□□□ -0.34
RNF4-212ENST00000509258 FAM184BQ9ULE4 1060 aa12.91□□□□□ -0.34
RNF4-212ENST00000509258 STX8Q9UNK0 236 aa12.91□□□□□ -0.34
RNF4-212ENST00000509258 BAZ2BQ9UIF8 2168 aaKnown RBP12.91□□□□□ -0.34
RNF4-212ENST00000509258 VCANP13611 3396 aa12.9□□□□□ -0.34
RNF4-212ENST00000509258 ASTN1O14525 1302 aa12.9□□□□□ -0.34
RNF4-212ENST00000509258 ZMYM6O95789 1325 aa12.9□□□□□ -0.34
RNF4-212ENST00000509258 FDX1P10109 184 aa12.9□□□□□ -0.34
RNF4-212ENST00000509258 PTGS1P23219 599 aa12.9□□□□□ -0.34
RNF4-212ENST00000509258 ACLYP53396 1101 aa12.9□□□□□ -0.34
RNF4-212ENST00000509258 FPGSQ05932 587 aa12.9□□□□□ -0.34
RNF4-212ENST00000509258 ANKRD33Q7Z3H0 272 aa12.9□□□□□ -0.34
RNF4-212ENST00000509258 TOX2Q96NM4 488 aa12.9□□□□□ -0.34
RNF4-212ENST00000509258 SEMA6BQ9H3T3 888 aa12.9□□□□□ -0.34
RNF4-212ENST00000509258 HOMER2Q9NSB8 354 aa12.9□□□□□ -0.34
RNF4-212ENST00000509258 TMEM39AQ9NV64 488 aa12.9□□□□□ -0.34
RNF4-212ENST00000509258 FBXO40Q9UH90 709 aa12.9□□□□□ -0.34
RNF4-212ENST00000509258 DCDC2CA8MYV0 355 aa12.89□□□□□ -0.35
RNF4-212ENST00000509258 DUSP11O75319 330 aaKnown RBP12.89□□□□□ -0.35
RNF4-212ENST00000509258 ITGB8P26012 769 aa12.89□□□□□ -0.35
RNF4-212ENST00000509258 CST5P28325 142 aaPredicted RBP12.89□□□□□ -0.35
RNF4-212ENST00000509258 OAZ1P54368 228 aa12.89□□□□□ -0.35
RNF4-212ENST00000509258 CNTN2Q02246 1040 aa12.89□□□□□ -0.35
RNF4-212ENST00000509258 CWC27Q6UX04 472 aaKnown RBP12.89□□□□□ -0.35
RNF4-212ENST00000509258 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.89□□□□□ -0.35
RNF4-212ENST00000509258 MAFAQ8NHW3 353 aaPredicted RBP12.89□□□□□ -0.35
RNF4-212ENST00000509258 STAG1Q8WVM7 1258 aa12.89□□□□□ -0.35
RNF4-212ENST00000509258 GLT1D1Q96MS3 346 aa12.89□□□□□ -0.35
RNF4-212ENST00000509258 PURBQ96QR8 312 aaKnown RBP12.89□□□□□ -0.35
RNF4-212ENST00000509258 TMEM47Q9BQJ4 181 aa12.89□□□□□ -0.35
RNF4-212ENST00000509258 COL25A1Q9BXS0 654 aaPredicted RBP12.89□□□□□ -0.35
RNF4-212ENST00000509258 KATNBL1Q9H079 304 aa12.89□□□□□ -0.35
RNF4-212ENST00000509258 TTYH1Q9H313 450 aaPredicted RBP12.89□□□□□ -0.35
RNF4-212ENST00000509258 PRR12Q9ULL5 1215 aa12.89□□□□□ -0.35
RNF4-212ENST00000509258 MROH7Q68CQ1 1323 aa12.88□□□□□ -0.35
RNF4-212ENST00000509258 FRMPD2Q68DX3 1309 aaPredicted RBP12.88□□□□□ -0.35
RNF4-212ENST00000509258 EYSQ5T1H1 3165 aa12.88□□□□□ -0.35
RNF4-212ENST00000509258 MYADML2A6NDP7 307 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms