RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 COG6Q9Y2V7 657 aa19.14■□□□□ 0.65
CXCL1-202ENST00000509101 MINDY4BA8MYZ0 360 aa19.13■□□□□ 0.65
CXCL1-202ENST00000509101 ARVCFO00192 962 aa19.13■□□□□ 0.65
CXCL1-202ENST00000509101 TLR3O15455 904 aaKnown RBP19.13■□□□□ 0.65
CXCL1-202ENST00000509101 SBK1Q52WX2 424 aa19.13■□□□□ 0.65
CXCL1-202ENST00000509101 GNASQ5JWF2 1037 aa19.13■□□□□ 0.65
CXCL1-202ENST00000509101 RASIP1Q5U651 963 aa19.13■□□□□ 0.65
CXCL1-202ENST00000509101 ZNF365Q70YC5 407 aa19.13■□□□□ 0.65
CXCL1-202ENST00000509101 FAM126BQ8IXS8 530 aa19.13■□□□□ 0.65
CXCL1-202ENST00000509101 TMEM199Q8N511 208 aa19.13■□□□□ 0.65
CXCL1-202ENST00000509101 STRBPQ96SI9 672 aaKnown RBP19.13■□□□□ 0.65
CXCL1-202ENST00000509101 SLC38A10Q9HBR0 1119 aa19.13■□□□□ 0.65
CXCL1-202ENST00000509101 CLIP2Q9UDT6 1046 aa19.13■□□□□ 0.65
CXCL1-202ENST00000509101 DDX19BQ9UMR2 479 aa19.13■□□□□ 0.65
CXCL1-202ENST00000509101 LCTP09848 1927 aa19.12■□□□□ 0.65
CXCL1-202ENST00000509101 GSG1L2A8MUP6 293 aa19.12■□□□□ 0.65
CXCL1-202ENST00000509101 MS4A1P11836 297 aa19.12■□□□□ 0.65
CXCL1-202ENST00000509101 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.12■□□□□ 0.65
CXCL1-202ENST00000509101 LRRC47Q8N1G4 583 aaKnown RBP19.12■□□□□ 0.65
CXCL1-202ENST00000509101 HOMER2Q9NSB8 354 aa19.12■□□□□ 0.65
CXCL1-202ENST00000509101 ZBTB40Q9NUA8 1239 aa19.12■□□□□ 0.65
CXCL1-202ENST00000509101 FBXO40Q9UH90 709 aa19.12■□□□□ 0.65
CXCL1-202ENST00000509101 CHD7Q9P2D1 2997 aa19.11■□□□□ 0.65
CXCL1-202ENST00000509101 IGKV6D-41A0A0C4DH26 115 aa19.11■□□□□ 0.65
CXCL1-202ENST00000509101 CYP2C18P33260 490 aa19.11■□□□□ 0.65
CXCL1-202ENST00000509101 BEX3Q00994 111 aa19.11■□□□□ 0.65
CXCL1-202ENST00000509101 CCDC144CPQ8IYA2 1237 aa19.11■□□□□ 0.65
CXCL1-202ENST00000509101 CHST13Q8NET6 341 aa19.11■□□□□ 0.65
CXCL1-202ENST00000509101 CEP95Q96GE4 821 aa19.11■□□□□ 0.65
CXCL1-202ENST00000509101 KATNBL1Q9H079 304 aa19.11■□□□□ 0.65
CXCL1-202ENST00000509101 THEGQ9P2T0 379 aa19.11■□□□□ 0.65
CXCL1-202ENST00000509101 FEM1BQ9UK73 627 aa19.11■□□□□ 0.65
CXCL1-202ENST00000509101 NCOR1O75376 2440 aa19.1■□□□□ 0.65
CXCL1-202ENST00000509101 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.1■□□□□ 0.65
CXCL1-202ENST00000509101 CTAGE5O15320 804 aa19.1■□□□□ 0.65
CXCL1-202ENST00000509101 SMARCA5O60264 1052 aaPredicted RBP19.1■□□□□ 0.65
CXCL1-202ENST00000509101 PRDM1O75626 825 aa19.1■□□□□ 0.65
CXCL1-202ENST00000509101 CNTN2Q02246 1040 aa19.1■□□□□ 0.65
CXCL1-202ENST00000509101 EPB41L4AQ9HCS5 686 aaPredicted RBP19.1■□□□□ 0.65
CXCL1-202ENST00000509101 IL23AQ9NPF7 189 aa19.1■□□□□ 0.65
CXCL1-202ENST00000509101 ISY1Q9ULR0 285 aaKnown RBP19.1■□□□□ 0.65
CXCL1-202ENST00000509101 BDP1A6H8Y1 2624 aa19.09■□□□□ 0.65
CXCL1-202ENST00000509101 ASTN1O14525 1302 aa19.09■□□□□ 0.65
CXCL1-202ENST00000509101 REV3LO60673 3130 aa19.09■□□□□ 0.65
CXCL1-202ENST00000509101 COL9A1P20849 921 aa19.09■□□□□ 0.65
CXCL1-202ENST00000509101 TDO2P48775 406 aa19.09■□□□□ 0.65
CXCL1-202ENST00000509101 RAB30Q15771 203 aa19.09■□□□□ 0.65
CXCL1-202ENST00000509101 AKNAD1Q5T1N1 836 aa19.09■□□□□ 0.65
CXCL1-202ENST00000509101 GIMAP6Q6P9H5 292 aa19.09■□□□□ 0.65
CXCL1-202ENST00000509101 OSBP2Q969R2 916 aa19.09■□□□□ 0.65
CXCL1-202ENST00000509101 LRRCC1Q9C099 1032 aa19.09■□□□□ 0.65
CXCL1-202ENST00000509101 NKX2-4Q9H2Z4 354 aa19.09■□□□□ 0.65
CXCL1-202ENST00000509101 CXXC1Q9P0U4 656 aaPredicted RBP19.09■□□□□ 0.65
CXCL1-202ENST00000509101 MSRAQ9UJ68 235 aa19.09■□□□□ 0.65
CXCL1-202ENST00000509101 UMODL1Q5DID0 1318 aa19.08■□□□□ 0.65
CXCL1-202ENST00000509101 CD4P01730 458 aa19.08■□□□□ 0.64
CXCL1-202ENST00000509101 IGFBP4P22692 258 aa19.08■□□□□ 0.64
CXCL1-202ENST00000509101 OAZ1P54368 228 aa19.08■□□□□ 0.64
CXCL1-202ENST00000509101 ADGRE1Q14246 886 aa19.08■□□□□ 0.64
CXCL1-202ENST00000509101 CCDC85BQ15834 202 aaPredicted RBP19.08■□□□□ 0.64
CXCL1-202ENST00000509101 CXCL17Q6UXB2 119 aa19.08■□□□□ 0.64
CXCL1-202ENST00000509101 NOL8Q76FK4 1167 aaKnown RBP19.08■□□□□ 0.64
CXCL1-202ENST00000509101 ZNF444Q8N0Y2 327 aaPredicted RBP19.08■□□□□ 0.64
CXCL1-202ENST00000509101 ATXN2LQ8WWM7 1075 aaKnown RBP19.08■□□□□ 0.64
CXCL1-202ENST00000509101 HERVK_113Q902F9 699 aa19.08■□□□□ 0.64
CXCL1-202ENST00000509101 MTIF3Q9H2K0 278 aaKnown RBP19.08■□□□□ 0.64
CXCL1-202ENST00000509101 MTMR4Q9NYA4 1195 aa19.08■□□□□ 0.64
CXCL1-202ENST00000509101 TCF20Q9UGU0 1960 aaKnown RBP19.07■□□□□ 0.64
CXCL1-202ENST00000509101 GPAA1O43292 621 aa19.07■□□□□ 0.64
CXCL1-202ENST00000509101 TTLL1O95922 423 aa19.07■□□□□ 0.64
CXCL1-202ENST00000509101 BMP3P12645 472 aa19.07■□□□□ 0.64
CXCL1-202ENST00000509101 TNFAIP2Q03169 654 aa19.07■□□□□ 0.64
CXCL1-202ENST00000509101 SLFN13Q68D06 897 aa19.07■□□□□ 0.64
CXCL1-202ENST00000509101 TLK2Q86UE8 772 aa19.07■□□□□ 0.64
CXCL1-202ENST00000509101 KBTBD3Q8NAB2 608 aa19.07■□□□□ 0.64
CXCL1-202ENST00000509101 GMCL1P1Q8NEA9 526 aa19.07■□□□□ 0.64
CXCL1-202ENST00000509101 APPBP2Q92624 585 aa19.07■□□□□ 0.64
CXCL1-202ENST00000509101 MKL1Q969V6 931 aa19.07■□□□□ 0.64
CXCL1-202ENST00000509101 HIPK3Q9H422 1215 aa19.07■□□□□ 0.64
CXCL1-202ENST00000509101 ACAD9Q9H845 621 aa19.07■□□□□ 0.64
CXCL1-202ENST00000509101 RNF146Q9NTX7 359 aa19.07■□□□□ 0.64
CXCL1-202ENST00000509101 PLIN4Q96Q06 1357 aa19.06■□□□□ 0.64
CXCL1-202ENST00000509101 PTGS1P23219 599 aa19.06■□□□□ 0.64
CXCL1-202ENST00000509101 NKX3-2P78367 333 aa19.06■□□□□ 0.64
CXCL1-202ENST00000509101 OTOP2Q7RTS6 562 aa19.06■□□□□ 0.64
CXCL1-202ENST00000509101 FAM133AQ8N9E0 248 aa19.06■□□□□ 0.64
CXCL1-202ENST00000509101 ADAMTS19Q8TE59 1207 aa19.06■□□□□ 0.64
CXCL1-202ENST00000509101 CHMP4CQ96CF2 233 aa19.06■□□□□ 0.64
CXCL1-202ENST00000509101 ASB2Q96Q27 587 aa19.06■□□□□ 0.64
CXCL1-202ENST00000509101 ZNF287Q9HBT7 754 aa19.06■□□□□ 0.64
CXCL1-202ENST00000509101 A1CFQ9NQ94 594 aaKnown RBP19.06■□□□□ 0.64
CXCL1-202ENST00000509101 ECHDC1Q9NTX5 307 aa19.06■□□□□ 0.64
CXCL1-202ENST00000509101 YBX2Q9Y2T7 364 aaKnown RBP19.06■□□□□ 0.64
CXCL1-202ENST00000509101 DDX49Q9Y6V7 483 aaKnown RBP19.06■□□□□ 0.64
CXCL1-202ENST00000509101 SCN5AQ14524 2016 aa19.06■□□□□ 0.64
CXCL1-202ENST00000509101 SOWAHBA6NEL2 793 aa19.05■□□□□ 0.64
CXCL1-202ENST00000509101 TMEM232C9JQI7 657 aa19.05■□□□□ 0.64
CXCL1-202ENST00000509101 M0R2C6 588 aa19.05■□□□□ 0.64
CXCL1-202ENST00000509101 RNF113AO15541 343 aaKnown RBP19.05■□□□□ 0.64
CXCL1-202ENST00000509101 FGBP02675 491 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms